RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 RIMS1Q86UR5 1692 aaKnown RBP29.63■■■□□ 2.33
TFF3-204ENST00000518498 PCF11O94913 1555 aaKnown RBP29.62■■■□□ 2.33
TFF3-204ENST00000518498 PLPPR3Q6T4P5 718 aa29.62■■■□□ 2.33
TFF3-204ENST00000518498 HECW1Q76N89 1606 aa29.62■■■□□ 2.33
TFF3-204ENST00000518498 MLECQ14165 292 aa29.61■■■□□ 2.33
TFF3-204ENST00000518498 FBXO41Q8TF61 875 aa29.61■■■□□ 2.33
TFF3-204ENST00000518498 LMTK3Q96Q04 1460 aa29.6■■■□□ 2.33
TFF3-204ENST00000518498 SIGLEC1Q9BZZ2 1709 aa29.53■■■□□ 2.32
TFF3-204ENST00000518498 MYO5CQ9NQX4 1742 aa29.53■■■□□ 2.32
TFF3-204ENST00000518498 ATP10AO60312 1499 aa29.52■■■□□ 2.32
TFF3-204ENST00000518498 TROQ12816 1431 aaPredicted RBP29.52■■■□□ 2.32
TFF3-204ENST00000518498 HSPA2P54652 639 aa29.51■■■□□ 2.31
TFF3-204ENST00000518498 CLIP1P30622 1438 aa29.49■■■□□ 2.31
TFF3-204ENST00000518498 KIF14Q15058 1648 aa29.48■■■□□ 2.31
TFF3-204ENST00000518498 AFAP1Q8N556 730 aa29.47■■■□□ 2.31
TFF3-204ENST00000518498 MYT1LQ9UL68 1186 aa29.46■■■□□ 2.31
TFF3-204ENST00000518498 C9orf84Q5VXU9 1444 aa29.45■■■□□ 2.31
TFF3-204ENST00000518498 ARHGAP5Q13017 1502 aa29.45■■■□□ 2.3
TFF3-204ENST00000518498 ZNF518AQ6AHZ1 1483 aa29.43■■■□□ 2.3
TFF3-204ENST00000518498 FER1L4A9Z1Z3 1794 aa29.42■■■□□ 2.3
TFF3-204ENST00000518498 ARHGEF12Q9NZN5 1544 aa29.4■■■□□ 2.3
TFF3-204ENST00000518498 LRRIQ1Q96JM4 1722 aa29.38■■■□□ 2.29
TFF3-204ENST00000518498 CEBPAP49715 358 aaPredicted RBP29.36■■■□□ 2.29
TFF3-204ENST00000518498 CASKIN1Q8WXD9 1431 aa29.35■■■□□ 2.29
TFF3-204ENST00000518498 KDM5CP41229 1560 aa29.34■■■□□ 2.29
TFF3-204ENST00000518498 CCDC18Q5T9S5 1454 aa29.32■■■□□ 2.28
TFF3-204ENST00000518498 CDC42BPBQ9Y5S2 1711 aa29.31■■■□□ 2.28
TFF3-204ENST00000518498 MLH3Q9UHC1 1453 aa29.29■■■□□ 2.28
TFF3-204ENST00000518498 DIP2CQ9Y2E4 1556 aa29.26■■■□□ 2.27
TFF3-204ENST00000518498 CERKQ8TCT0 537 aa29.25■■■□□ 2.27
TFF3-204ENST00000518498 TRAPPC8Q9Y2L5 1435 aa29.25■■■□□ 2.27
TFF3-204ENST00000518498 PREX2Q70Z35 1606 aa29.23■■■□□ 2.27
TFF3-204ENST00000518498 ESF1Q9H501 851 aaKnown RBP29.23■■■□□ 2.27
TFF3-204ENST00000518498 PREX1Q8TCU6 1659 aa29.23■■■□□ 2.27
TFF3-204ENST00000518498 REREQ9P2R6 1566 aa29.22■■■□□ 2.27
TFF3-204ENST00000518498 ABCC1P33527 1531 aa29.2■■■□□ 2.27
TFF3-204ENST00000518498 ZNF777Q9ULD5 760 aaPredicted RBP29.2■■■□□ 2.26
TFF3-204ENST00000518498 DMRT2Q9Y5R5 561 aa29.2■■■□□ 2.26
TFF3-204ENST00000518498 ABCA6Q8N139 1617 aa29.19■■■□□ 2.26
TFF3-204ENST00000518498 FYCO1Q9BQS8 1478 aa29.18■■■□□ 2.26
TFF3-204ENST00000518498 UHRF1BP1Q6BDS2 1440 aa29.17■■■□□ 2.26
TFF3-204ENST00000518498 AGLP35573 1532 aa29.16■■■□□ 2.26
TFF3-204ENST00000518498 ITSN2Q9NZM3 1697 aa29.16■■■□□ 2.26
TFF3-204ENST00000518498 CDC42BPAQ5VT25 1732 aa29.14■■■□□ 2.26
TFF3-204ENST00000518498 SETD1BQ9UPS6 1966 aaKnown RBP29.13■■■□□ 2.25
TFF3-204ENST00000518498 HNRNPMP52272 730 aaKnown RBP eCLIP29.11■■■□□ 2.25
TFF3-204ENST00000518498 KIDINS220Q9ULH0 1771 aa29.11■■■□□ 2.25
TFF3-204ENST00000518498 GPATCH8Q9UKJ3 1502 aaKnown RBP29.1■■■□□ 2.25
TFF3-204ENST00000518498 SPAG9O60271 1321 aaKnown RBP29.08■■■□□ 2.25
TFF3-204ENST00000518498 C3P01024 1663 aa29.08■■■□□ 2.25
TFF3-204ENST00000518498 CFDP1Q9UEE9 299 aaPredicted RBP29.07■■■□□ 2.24
TFF3-204ENST00000518498 STRCQ7RTU9 1775 aa29.06■■■□□ 2.24
TFF3-204ENST00000518498 SAMD9LQ8IVG5 1584 aa29.05■■■□□ 2.24
TFF3-204ENST00000518498 CNTLNQ9NXG0 1405 aa29.05■■■□□ 2.24
TFF3-204ENST00000518498 CCNB3Q8WWL7 1395 aa29.01■■■□□ 2.24
TFF3-204ENST00000518498 SYCP2Q9BX26 1530 aa29.01■■■□□ 2.23
TFF3-204ENST00000518498 KIAA1107Q9UPP5 1409 aa29■■■□□ 2.23
TFF3-204ENST00000518498 MTUS2Q5JR59 1369 aa28.99■■■□□ 2.23
TFF3-204ENST00000518498 PLEKHH2Q8IVE3 1493 aa28.98■■■□□ 2.23
TFF3-204ENST00000518498 PTPRTO14522 1441 aa28.98■■■□□ 2.23
TFF3-204ENST00000518498 ZMYM3Q14202 1370 aa28.97■■■□□ 2.23
TFF3-204ENST00000518498 ATP7AQ04656 1500 aa28.93■■■□□ 2.22
TFF3-204ENST00000518498 SUPT6HQ7KZ85 1726 aaKnown RBP28.92■■■□□ 2.22
TFF3-204ENST00000518498 NPATQ14207 1427 aa28.92■■■□□ 2.22
TFF3-204ENST00000518498 A2MP01023 1474 aa28.91■■■□□ 2.22
TFF3-204ENST00000518498 GGT6Q6P531 493 aa28.9■■■□□ 2.22
TFF3-204ENST00000518498 MROH2AA6NES4 1674 aa28.89■■■□□ 2.22
TFF3-204ENST00000518498 ZNF644Q9H582 1327 aaPredicted RBP28.88■■■□□ 2.21
TFF3-204ENST00000518498 NCOA1Q15788 1441 aa28.86■■■□□ 2.21
TFF3-204ENST00000518498 INO80Q9ULG1 1556 aaPredicted RBP28.86■■■□□ 2.21
TFF3-204ENST00000518498 PPP6R1Q9UPN7 881 aa28.85■■■□□ 2.21
TFF3-204ENST00000518498 PLXNC1O60486 1568 aa28.83■■■□□ 2.21
TFF3-204ENST00000518498 CLTCQ00610 1675 aaKnown RBP28.82■■■□□ 2.2
TFF3-204ENST00000518498 CAMSAP1Q5T5Y3 1602 aa28.81■■■□□ 2.2
TFF3-204ENST00000518498 LOC105371045A0A1W2PR82 267 aa28.81■■■□□ 2.2
TFF3-204ENST00000518498 TIAM1Q13009 1591 aa28.79■■■□□ 2.2
TFF3-204ENST00000518498 NCKAP5LQ9HCH0 1330 aa28.79■■■□□ 2.2
TFF3-204ENST00000518498 EHBP1L1Q8N3D4 1523 aa28.79■■■□□ 2.2
TFF3-204ENST00000518498 MBD5Q9P267 1494 aa28.78■■■□□ 2.2
TFF3-204ENST00000518498 LTBP4Q8N2S1 1624 aa28.77■■■□□ 2.2
TFF3-204ENST00000518498 RTEL1-TNFRSF6BF6WH68 1400 aa28.77■■■□□ 2.2
TFF3-204ENST00000518498 PTPRKQ15262 1439 aa28.77■■■□□ 2.2
TFF3-204ENST00000518498 CEP162Q5TB80 1403 aa28.77■■■□□ 2.2
TFF3-204ENST00000518498 ADGBQ8N7X0 1667 aa28.77■■■□□ 2.2
TFF3-204ENST00000518498 PKD2Q13563 968 aa28.74■■■□□ 2.19
TFF3-204ENST00000518498 DHX29Q7Z478 1369 aaKnown RBP28.74■■■□□ 2.19
TFF3-204ENST00000518498 RSPH4AQ5TD94 716 aa28.72■■■□□ 2.19
TFF3-204ENST00000518498 IQSEC2Q5JU85 1478 aa28.71■■■□□ 2.19
TFF3-204ENST00000518498 MYO3AQ8NEV4 1616 aa28.69■■■□□ 2.18
TFF3-204ENST00000518498 DISP3Q9P2K9 1392 aa28.68■■■□□ 2.18
TFF3-204ENST00000518498 KIF3BO15066 747 aa28.68■■■□□ 2.18
TFF3-204ENST00000518498 PLA2R1Q13018 1463 aa28.67■■■□□ 2.18
TFF3-204ENST00000518498 CEP170BQ9Y4F5 1589 aaPredicted RBP28.67■■■□□ 2.18
TFF3-204ENST00000518498 ZNF142P52746 1687 aaPredicted RBP28.66■■■□□ 2.18
TFF3-204ENST00000518498 ZNF335Q9H4Z2 1342 aaPredicted RBP28.66■■■□□ 2.18
TFF3-204ENST00000518498 NCOA2Q15596 1464 aa28.65■■■□□ 2.18
TFF3-204ENST00000518498 CCDC141Q6ZP82 1450 aa28.63■■■□□ 2.17
TFF3-204ENST00000518498 TCOF1Q13428 1488 aaKnown RBP28.62■■■□□ 2.17
TFF3-204ENST00000518498 TSPY4P0CV99 314 aa28.61■■■□□ 2.17
TFF3-204ENST00000518498 TSPY10P0CW01 314 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms