RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 CYB5RLQ6IPT4 315 aa26.67■■□□□ 1.86
SDC2-202ENST00000518385 GPATCH8Q9UKJ3 1502 aaKnown RBP26.66■■□□□ 1.86
SDC2-202ENST00000518385 PTPN23Q9H3S7 1636 aa26.65■■□□□ 1.86
SDC2-202ENST00000518385 KCNH8Q96L42 1107 aa26.62■■□□□ 1.85
SDC2-202ENST00000518385 ITSN2Q9NZM3 1697 aa26.61■■□□□ 1.85
SDC2-202ENST00000518385 CFDP1Q9UEE9 299 aaPredicted RBP26.6■■□□□ 1.85
SDC2-202ENST00000518385 WDR7Q9Y4E6 1490 aa26.6■■□□□ 1.85
SDC2-202ENST00000518385 ASXL2Q76L83 1435 aa26.58■■□□□ 1.85
SDC2-202ENST00000518385 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.58■■□□□ 1.85
SDC2-202ENST00000518385 CDC42BPAQ5VT25 1732 aa26.57■■□□□ 1.84
SDC2-202ENST00000518385 HFM1A2PYH4 1435 aa26.55■■□□□ 1.84
SDC2-202ENST00000518385 ZNF644Q9H582 1327 aaPredicted RBP26.52■■□□□ 1.84
SDC2-202ENST00000518385 TTC37Q6PGP7 1564 aa26.52■■□□□ 1.84
SDC2-202ENST00000518385 AKNAQ7Z591 1439 aa26.5■■□□□ 1.83
SDC2-202ENST00000518385 PTPRKQ15262 1439 aa26.48■■□□□ 1.83
SDC2-202ENST00000518385 PREX2Q70Z35 1606 aa26.48■■□□□ 1.83
SDC2-202ENST00000518385 CAMSAP2Q08AD1 1489 aa26.47■■□□□ 1.83
SDC2-202ENST00000518385 ZNF777Q9ULD5 760 aaPredicted RBP26.47■■□□□ 1.83
SDC2-202ENST00000518385 CDC42BPBQ9Y5S2 1711 aa26.47■■□□□ 1.83
SDC2-202ENST00000518385 MYO5CQ9NQX4 1742 aa26.45■■□□□ 1.83
SDC2-202ENST00000518385 PLCH2O75038 1416 aa26.45■■□□□ 1.83
SDC2-202ENST00000518385 MAPKBP1O60336 1514 aa26.43■■□□□ 1.82
SDC2-202ENST00000518385 NAIPQ13075 1403 aa26.42■■□□□ 1.82
SDC2-202ENST00000518385 ABCA9Q8IUA7 1624 aa26.42■■□□□ 1.82
SDC2-202ENST00000518385 ABCC5O15440 1437 aa26.4■■□□□ 1.82
SDC2-202ENST00000518385 DNMT1P26358 1616 aaKnown RBP26.4■■□□□ 1.82
SDC2-202ENST00000518385 ARHGAP5Q13017 1502 aa26.4■■□□□ 1.82
SDC2-202ENST00000518385 DAPK1P53355 1430 aa26.39■■□□□ 1.82
SDC2-202ENST00000518385 ARAP3Q8WWN8 1544 aa26.38■■□□□ 1.81
SDC2-202ENST00000518385 EFCAB2Q5VUJ9 269 aa26.37■■□□□ 1.81
SDC2-202ENST00000518385 GCC2Q8IWJ2 1684 aa26.37■■□□□ 1.81
SDC2-202ENST00000518385 ROCK1Q13464 1354 aa26.37■■□□□ 1.81
SDC2-202ENST00000518385 MIER1Q8N108 512 aa26.37■■□□□ 1.81
SDC2-202ENST00000518385 SAMD9LQ8IVG5 1584 aa26.36■■□□□ 1.81
SDC2-202ENST00000518385 TIMELESSQ9UNS1 1208 aa26.36■■□□□ 1.81
SDC2-202ENST00000518385 CHIC2Q9UKJ5 165 aa26.33■■□□□ 1.81
SDC2-202ENST00000518385 RSPH4AQ5TD94 716 aa26.33■■□□□ 1.8
SDC2-202ENST00000518385 PLEKHH2Q8IVE3 1493 aa26.32■■□□□ 1.8
SDC2-202ENST00000518385 MBD5Q9P267 1494 aa26.32■■□□□ 1.8
SDC2-202ENST00000518385 HNRNPMP52272 730 aaKnown RBP eCLIP26.32■■□□□ 1.85e-7■■■□□ 14.9
SDC2-202ENST00000518385 KIAA1107Q9UPP5 1409 aa26.31■■□□□ 1.8
SDC2-202ENST00000518385 ARHGEF5Q12774 1597 aa26.3■■□□□ 1.8
SDC2-202ENST00000518385 CD109Q6YHK3 1445 aa26.27■■□□□ 1.8
SDC2-202ENST00000518385 CROCC2H7BZ55 1655 aa26.26■■□□□ 1.79
SDC2-202ENST00000518385 RRP7BPQ9NSQ0 103 aa26.25■■□□□ 1.79
SDC2-202ENST00000518385 FANCAO15360 1455 aa26.24■■□□□ 1.79
SDC2-202ENST00000518385 SYCP2Q9BX26 1530 aa26.24■■□□□ 1.79
SDC2-202ENST00000518385 GLI2P10070 1586 aa26.24■■□□□ 1.79
SDC2-202ENST00000518385 TSPY4P0CV99 314 aa26.24■■□□□ 1.79
SDC2-202ENST00000518385 TSPY10P0CW01 314 aa26.24■■□□□ 1.79
SDC2-202ENST00000518385 SHANK2Q9UPX8 1470 aa26.23■■□□□ 1.79
SDC2-202ENST00000518385 CCDC141Q6ZP82 1450 aa26.23■■□□□ 1.79
SDC2-202ENST00000518385 ARHGEF12Q9NZN5 1544 aa26.22■■□□□ 1.79
SDC2-202ENST00000518385 ADGRL2O95490 1459 aa26.21■■□□□ 1.79
SDC2-202ENST00000518385 ABCC1P33527 1531 aa26.21■■□□□ 1.79
SDC2-202ENST00000518385 NCOA1Q15788 1441 aa26.21■■□□□ 1.79
SDC2-202ENST00000518385 DNAJC5Q9H3Z4 198 aa26.2■■□□□ 1.79
SDC2-202ENST00000518385 C9orf84Q5VXU9 1444 aa26.19■■□□□ 1.78
SDC2-202ENST00000518385 ADGBQ8N7X0 1667 aa26.18■■□□□ 1.78
SDC2-202ENST00000518385 ANKRD30AQ9BXX3 1397 aa26.18■■□□□ 1.78
SDC2-202ENST00000518385 FAM69CQ0P6D2 419 aa26.16■■□□□ 1.78
SDC2-202ENST00000518385 DIP2BQ9P265 1576 aa26.16■■□□□ 1.78
SDC2-202ENST00000518385 MAP3K4Q9Y6R4 1608 aa26.16■■□□□ 1.78
SDC2-202ENST00000518385 YTHDC1Q96MU7 727 aaKnown RBP26.16■■□□□ 1.78
SDC2-202ENST00000518385 TRAPPC8Q9Y2L5 1435 aa26.13■■□□□ 1.77
SDC2-202ENST00000518385 CFAP74Q9C0B2 1584 aa26.13■■□□□ 1.77
SDC2-202ENST00000518385 MAST1Q9Y2H9 1570 aa26.13■■□□□ 1.77
SDC2-202ENST00000518385 ADGRL1O94910 1474 aa26.12■■□□□ 1.77
SDC2-202ENST00000518385 SCAPERQ9BY12 1400 aa26.11■■□□□ 1.77
SDC2-202ENST00000518385 NEO1Q92859 1461 aa26.09■■□□□ 1.77
SDC2-202ENST00000518385 AFAP1Q8N556 730 aa26.07■■□□□ 1.76
SDC2-202ENST00000518385 SIN3AQ96ST3 1273 aa26.07■■□□□ 1.76
SDC2-202ENST00000518385 KDM6BO15054 1643 aa26.07■■□□□ 1.76
SDC2-202ENST00000518385 TRIM52Q96A61 297 aa26.04■■□□□ 1.76
SDC2-202ENST00000518385 RTEL1-TNFRSF6BF6WH68 1400 aa26.04■■□□□ 1.76
SDC2-202ENST00000518385 SPAG9O60271 1321 aaKnown RBP26.03■■□□□ 1.76
SDC2-202ENST00000518385 KIF15Q9NS87 1388 aa26.03■■□□□ 1.76
SDC2-202ENST00000518385 ANKRD50Q9ULJ7 1429 aa26.02■■□□□ 1.76
SDC2-202ENST00000518385 PLXNC1O60486 1568 aa26.01■■□□□ 1.75
SDC2-202ENST00000518385 MPHOSPH9Q99550 1183 aa26.01■■□□□ 1.75
SDC2-202ENST00000518385 KIF13AQ9H1H9 1805 aa26■■□□□ 1.75
SDC2-202ENST00000518385 PPP1R15AO75807 674 aaPredicted RBP25.99■■□□□ 1.75
SDC2-202ENST00000518385 TONSLQ96HA7 1378 aa25.99■■□□□ 1.75
SDC2-202ENST00000518385 ZNF518AQ6AHZ1 1483 aa25.98■■□□□ 1.75
SDC2-202ENST00000518385 DENND4BO75064 1496 aaPredicted RBP25.96■■□□□ 1.75
SDC2-202ENST00000518385 PPRC1Q5VV67 1664 aaKnown RBP25.96■■□□□ 1.75
SDC2-202ENST00000518385 POGZQ7Z3K3 1410 aa25.96■■□□□ 1.75
SDC2-202ENST00000518385 TEX14Q8IWB6 1497 aa25.95■■□□□ 1.74
SDC2-202ENST00000518385 ZFYVE16Q7Z3T8 1539 aa25.94■■□□□ 1.74
SDC2-202ENST00000518385 TSPOAP1O95153 1857 aa25.93■■□□□ 1.74
SDC2-202ENST00000518385 DUOX2Q9NRD8 1548 aa25.93■■□□□ 1.74
SDC2-202ENST00000518385 INO80Q9ULG1 1556 aaPredicted RBP25.92■■□□□ 1.74
SDC2-202ENST00000518385 ATP7AQ04656 1500 aa25.92■■□□□ 1.74
SDC2-202ENST00000518385 KDM5CP41229 1560 aa25.91■■□□□ 1.74
SDC2-202ENST00000518385 MLH3Q9UHC1 1453 aa25.88■■□□□ 1.73
SDC2-202ENST00000518385 RAPGEF3O95398 923 aa25.87■■□□□ 1.73
SDC2-202ENST00000518385 MYT1LQ9UL68 1186 aa25.87■■□□□ 1.73
SDC2-202ENST00000518385 ANKRD30BQ9BXX2 1392 aa25.87■■□□□ 1.73
SDC2-202ENST00000518385 ERBINQ96RT1 1412 aa25.87■■□□□ 1.73
SDC2-202ENST00000518385 KIDINS220Q9ULH0 1771 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms