RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 MYO5CQ9NQX4 1742 aa12□□□□□ -0.49
ARFGEF1-204ENST00000518290 DAPK1P53355 1430 aa12□□□□□ -0.49
ARFGEF1-204ENST00000518290 TTBK1Q5TCY1 1321 aaPredicted RBP11.99□□□□□ -0.49
ARFGEF1-204ENST00000518290 KDM5DQ9BY66 1539 aa11.99□□□□□ -0.49
ARFGEF1-204ENST00000518290 HNRNPUL2Q1KMD3 747 aaKnown RBP11.99□□□□□ -0.49
ARFGEF1-204ENST00000518290 KDM6BO15054 1643 aa11.97□□□□□ -0.49
ARFGEF1-204ENST00000518290 DENND4BO75064 1496 aaPredicted RBP11.97□□□□□ -0.49
ARFGEF1-204ENST00000518290 ABCC5O15440 1437 aa11.96□□□□□ -0.49
ARFGEF1-204ENST00000518290 PLXNC1O60486 1568 aa11.96□□□□□ -0.49
ARFGEF1-204ENST00000518290 SAMD9LQ8IVG5 1584 aa11.96□□□□□ -0.5
ARFGEF1-204ENST00000518290 TTC37Q6PGP7 1564 aa11.95□□□□□ -0.5
ARFGEF1-204ENST00000518290 PTPRGP23470 1445 aa11.95□□□□□ -0.5
ARFGEF1-204ENST00000518290 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.94□□□□□ -0.5
ARFGEF1-204ENST00000518290 TIMELESSQ9UNS1 1208 aa11.94□□□□□ -0.5
ARFGEF1-204ENST00000518290 CDK11AQ9UQ88 783 aaPredicted RBP11.93□□□□□ -0.5
ARFGEF1-204ENST00000518290 ABCA9Q8IUA7 1624 aa11.91□□□□□ -0.5
ARFGEF1-204ENST00000518290 MBD5Q9P267 1494 aa11.91□□□□□ -0.5
ARFGEF1-204ENST00000518290 UNC13BO14795 1591 aa11.9□□□□□ -0.5
ARFGEF1-204ENST00000518290 KIAA1107Q9UPP5 1409 aa11.88□□□□□ -0.51
ARFGEF1-204ENST00000518290 PLEKHH2Q8IVE3 1493 aa11.88□□□□□ -0.51
ARFGEF1-204ENST00000518290 NCOA1Q15788 1441 aa11.87□□□□□ -0.51
ARFGEF1-204ENST00000518290 ABCC1P33527 1531 aa11.87□□□□□ -0.51
ARFGEF1-204ENST00000518290 MAGI2Q86UL8 1455 aa11.86□□□□□ -0.51
ARFGEF1-204ENST00000518290 FAM50AQ14320 339 aaKnown RBP11.85□□□□□ -0.51
ARFGEF1-204ENST00000518290 CCDC141Q6ZP82 1450 aa11.84□□□□□ -0.51
ARFGEF1-204ENST00000518290 PZPP20742 1482 aa11.84□□□□□ -0.51
ARFGEF1-204ENST00000518290 DEPDC5O75140 1603 aa11.83□□□□□ -0.52
ARFGEF1-204ENST00000518290 WDR7Q9Y4E6 1490 aa11.83□□□□□ -0.52
ARFGEF1-204ENST00000518290 POLR1AO95602 1720 aaPredicted RBP11.83□□□□□ -0.52
ARFGEF1-204ENST00000518290 BCORL1Q5H9F3 1711 aa11.83□□□□□ -0.52
ARFGEF1-204ENST00000518290 CFAP74Q9C0B2 1584 aa11.82□□□□□ -0.52
ARFGEF1-204ENST00000518290 ATP1B4Q9UN42 357 aaPredicted RBP11.82□□□□□ -0.52
ARFGEF1-204ENST00000518290 IQGAP3Q86VI3 1631 aa11.82□□□□□ -0.52
ARFGEF1-204ENST00000518290 FBLN2P98095 1184 aa11.81□□□□□ -0.52
ARFGEF1-204ENST00000518290 INO80Q9ULG1 1556 aaPredicted RBP11.81□□□□□ -0.52
ARFGEF1-204ENST00000518290 PLCH2O75038 1416 aa11.81□□□□□ -0.52
ARFGEF1-204ENST00000518290 EIF2AK4Q9P2K8 1649 aaKnown RBP11.8□□□□□ -0.52
ARFGEF1-204ENST00000518290 C9orf84Q5VXU9 1444 aa11.8□□□□□ -0.52
ARFGEF1-204ENST00000518290 SYCP2Q9BX26 1530 aa11.79□□□□□ -0.52
ARFGEF1-204ENST00000518290 ZNF316A6NFI3 1004 aaPredicted RBP11.79□□□□□ -0.52
ARFGEF1-204ENST00000518290 PLEKHD1A6NEE1 506 aa11.79□□□□□ -0.52
ARFGEF1-204ENST00000518290 RPRD2Q5VT52 1461 aaKnown RBP11.78□□□□□ -0.52
ARFGEF1-204ENST00000518290 TEX14Q8IWB6 1497 aa11.78□□□□□ -0.52
ARFGEF1-204ENST00000518290 RSPH4AQ5TD94 716 aa11.77□□□□□ -0.52
ARFGEF1-204ENST00000518290 ANKRD30AQ9BXX3 1397 aa11.77□□□□□ -0.53
ARFGEF1-204ENST00000518290 DUOX2Q9NRD8 1548 aa11.76□□□□□ -0.53
ARFGEF1-204ENST00000518290 RTEL1-TNFRSF6BF6WH68 1400 aa11.76□□□□□ -0.53
ARFGEF1-204ENST00000518290 ARHGAP5Q13017 1502 aa11.76□□□□□ -0.53
ARFGEF1-204ENST00000518290 ZFYVE16Q7Z3T8 1539 aa11.76□□□□□ -0.53
ARFGEF1-204ENST00000518290 ARHGEF12Q9NZN5 1544 aa11.76□□□□□ -0.53
ARFGEF1-204ENST00000518290 NEURL4Q96JN8 1562 aa11.76□□□□□ -0.53
ARFGEF1-204ENST00000518290 ANKRD30BQ9BXX2 1392 aa11.75□□□□□ -0.53
ARFGEF1-204ENST00000518290 VWDEQ8N2E2 1590 aa11.75□□□□□ -0.53
ARFGEF1-204ENST00000518290 ERBINQ96RT1 1412 aa11.75□□□□□ -0.53
ARFGEF1-204ENST00000518290 CFDP1Q9UEE9 299 aaPredicted RBP11.74□□□□□ -0.53
ARFGEF1-204ENST00000518290 ATP10AO60312 1499 aa11.74□□□□□ -0.53
ARFGEF1-204ENST00000518290 GLI2P10070 1586 aa11.73□□□□□ -0.53
ARFGEF1-204ENST00000518290 KDM5CP41229 1560 aa11.73□□□□□ -0.53
ARFGEF1-204ENST00000518290 ZNF644Q9H582 1327 aaPredicted RBP11.73□□□□□ -0.53
ARFGEF1-204ENST00000518290 MAP3K4Q9Y6R4 1608 aa11.72□□□□□ -0.53
ARFGEF1-204ENST00000518290 ANKRD50Q9ULJ7 1429 aa11.72□□□□□ -0.53
ARFGEF1-204ENST00000518290 LAMC1P11047 1609 aa11.71□□□□□ -0.53
ARFGEF1-204ENST00000518290 ITGAEP38570 1179 aa11.71□□□□□ -0.54
ARFGEF1-204ENST00000518290 RNF17Q9BXT8 1623 aaKnown RBP11.71□□□□□ -0.54
ARFGEF1-204ENST00000518290 FAM135AQ9P2D6 1515 aa11.7□□□□□ -0.54
ARFGEF1-204ENST00000518290 MROH1Q8NDA8 1641 aa11.68□□□□□ -0.54
ARFGEF1-204ENST00000518290 PPP1R15AO75807 674 aaPredicted RBP11.68□□□□□ -0.54
ARFGEF1-204ENST00000518290 PRDM15P57071 1507 aaPredicted RBP11.68□□□□□ -0.54
ARFGEF1-204ENST00000518290 UHRF1BP1Q6BDS2 1440 aa11.68□□□□□ -0.54
ARFGEF1-204ENST00000518290 TET3O43151 1660 aa11.67□□□□□ -0.54
ARFGEF1-204ENST00000518290 KIDINS220Q9ULH0 1771 aa11.67□□□□□ -0.54
ARFGEF1-204ENST00000518290 KIF15Q9NS87 1388 aa11.66□□□□□ -0.54
ARFGEF1-204ENST00000518290 MPHOSPH9Q99550 1183 aa11.66□□□□□ -0.54
ARFGEF1-204ENST00000518290 ASXL2Q76L83 1435 aa11.66□□□□□ -0.54
ARFGEF1-204ENST00000518290 ATP7AQ04656 1500 aa11.66□□□□□ -0.54
ARFGEF1-204ENST00000518290 CEP152O94986 1710 aa11.66□□□□□ -0.54
ARFGEF1-204ENST00000518290 DIEXFQ68CQ4 756 aaKnown RBP11.65□□□□□ -0.54
ARFGEF1-204ENST00000518290 LMTK2Q8IWU2 1503 aa11.65□□□□□ -0.54
ARFGEF1-204ENST00000518290 SCAF1Q9H7N4 1312 aaKnown RBP11.65□□□□□ -0.54
ARFGEF1-204ENST00000518290 RRP7BPQ9NSQ0 103 aa11.64□□□□□ -0.55
ARFGEF1-204ENST00000518290 RIMBP3CA6NJZ7 1639 aa11.64□□□□□ -0.55
ARFGEF1-204ENST00000518290 RIMBP3BA6NNM3 1639 aa11.64□□□□□ -0.55
ARFGEF1-204ENST00000518290 RIMBP3Q9UFD9 1639 aa11.64□□□□□ -0.55
ARFGEF1-204ENST00000518290 RICTORQ6R327 1708 aa11.64□□□□□ -0.55
ARFGEF1-204ENST00000518290 E9PCH4 1651 aa11.63□□□□□ -0.55
ARFGEF1-204ENST00000518290 SPHKAPQ2M3C7 1700 aa11.63□□□□□ -0.55
ARFGEF1-204ENST00000518290 FANCAO15360 1455 aa11.63□□□□□ -0.55
ARFGEF1-204ENST00000518290 OSCARQ8IYS5 282 aa11.62□□□□□ -0.55
ARFGEF1-204ENST00000518290 NEO1Q92859 1461 aa11.62□□□□□ -0.55
ARFGEF1-204ENST00000518290 TRPM1Q7Z4N2 1603 aa11.61□□□□□ -0.55
ARFGEF1-204ENST00000518290 TONSLQ96HA7 1378 aa11.61□□□□□ -0.55
ARFGEF1-204ENST00000518290 TRPM2O94759 1503 aa11.61□□□□□ -0.55
ARFGEF1-204ENST00000518290 ARID3CA6NKF2 412 aa11.61□□□□□ -0.55
ARFGEF1-204ENST00000518290 SIN3AQ96ST3 1273 aa11.61□□□□□ -0.55
ARFGEF1-204ENST00000518290 HECW2Q9P2P5 1572 aa11.61□□□□□ -0.55
ARFGEF1-204ENST00000518290 MYT1Q01538 1121 aa11.61□□□□□ -0.55
ARFGEF1-204ENST00000518290 SPATA31E1Q6ZUB1 1445 aa11.61□□□□□ -0.55
ARFGEF1-204ENST00000518290 TRAPPC8Q9Y2L5 1435 aa11.61□□□□□ -0.55
ARFGEF1-204ENST00000518290 PPRC1Q5VV67 1664 aaKnown RBP11.6□□□□□ -0.55
ARFGEF1-204ENST00000518290 IFT172Q9UG01 1749 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms