RNA–Protein interactions for RNA: ENST00000518136.3

HOXA13-202, Transcript of homeobox A13, humanhuman

TSL 2

Gene HOXA13, Length 871 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13-202ENST00000518136 GSE1Q14687 1217 aa13.45□□□□□ -0.26
HOXA13-202ENST00000518136 TSPYL2Q9H2G4 693 aaPredicted RBP13.44□□□□□ -0.26
HOXA13-202ENST00000518136 CLIP1P30622 1438 aa13.44□□□□□ -0.26
HOXA13-202ENST00000518136 DISP1Q96F81 1524 aa13.43□□□□□ -0.26
HOXA13-202ENST00000518136 EFCAB5A4FU69 1503 aa13.42□□□□□ -0.26
HOXA13-202ENST00000518136 KIAA0556O60303 1618 aa13.42□□□□□ -0.26
HOXA13-202ENST00000518136 ERCC6L2Q5T890 1561 aa13.41□□□□□ -0.26
HOXA13-202ENST00000518136 PAK3O75914 559 aaPredicted RBP13.41□□□□□ -0.26
HOXA13-202ENST00000518136 CD44P16070 742 aaKnown RBP13.39□□□□□ -0.27
HOXA13-202ENST00000518136 PKD2Q13563 968 aa13.39□□□□□ -0.27
HOXA13-202ENST00000518136 HAX1O00165 279 aa13.38□□□□□ -0.27
HOXA13-202ENST00000518136 RANGAP1P46060 587 aaPredicted RBP13.38□□□□□ -0.27
HOXA13-202ENST00000518136 LRRIQ1Q96JM4 1722 aa13.37□□□□□ -0.27
HOXA13-202ENST00000518136 FHOD3Q2V2M9 1422 aa13.37□□□□□ -0.27
HOXA13-202ENST00000518136 C19orf67A6NJJ6 358 aa13.36□□□□□ -0.27
HOXA13-202ENST00000518136 ZRANB1Q9UGI0 708 aa13.35□□□□□ -0.27
HOXA13-202ENST00000518136 PCF11O94913 1555 aaKnown RBP13.33□□□□□ -0.28
HOXA13-202ENST00000518136 ECM2O94769 699 aaPredicted RBP13.33□□□□□ -0.28
HOXA13-202ENST00000518136 JPH4Q96JJ6 628 aa13.32□□□□□ -0.28
HOXA13-202ENST00000518136 PRG4Q92954 1404 aaPredicted RBP13.31□□□□□ -0.28
HOXA13-202ENST00000518136 VPS8Q8N3P4 1428 aa13.3□□□□□ -0.28
HOXA13-202ENST00000518136 P3H3Q8IVL6 736 aa13.3□□□□□ -0.28
HOXA13-202ENST00000518136 CCDC61Q9Y6R9 512 aa13.29□□□□□ -0.28
HOXA13-202ENST00000518136 PYGBP11216 843 aa13.28□□□□□ -0.28
HOXA13-202ENST00000518136 CFAP43Q8NDM7 1665 aa13.25□□□□□ -0.29
HOXA13-202ENST00000518136 ABCA8O94911 1581 aa13.25□□□□□ -0.29
HOXA13-202ENST00000518136 RAPGEF6Q8TEU7 1601 aa13.24□□□□□ -0.29
HOXA13-202ENST00000518136 CARMIL2Q6F5E8 1435 aa13.24□□□□□ -0.29
HOXA13-202ENST00000518136 EVX2Q03828 476 aa13.24□□□□□ -0.29
HOXA13-202ENST00000518136 CHRM1P11229 460 aaPredicted RBP13.23□□□□□ -0.29
HOXA13-202ENST00000518136 RIMBP3CA6NJZ7 1639 aa13.23□□□□□ -0.29
HOXA13-202ENST00000518136 RIMBP3BA6NNM3 1639 aa13.23□□□□□ -0.29
HOXA13-202ENST00000518136 RIMBP3Q9UFD9 1639 aa13.23□□□□□ -0.29
HOXA13-202ENST00000518136 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
HOXA13-202ENST00000518136 FYCO1Q9BQS8 1478 aa13.23□□□□□ -0.29
HOXA13-202ENST00000518136 FMN1Q68DA7 1419 aa13.22□□□□□ -0.29
HOXA13-202ENST00000518136 CASKIN1Q8WXD9 1431 aa13.22□□□□□ -0.29
HOXA13-202ENST00000518136 PLB1Q6P1J6 1458 aa13.22□□□□□ -0.29
HOXA13-202ENST00000518136 HECW1Q76N89 1606 aa13.21□□□□□ -0.3
HOXA13-202ENST00000518136 ZNF579Q8NAF0 562 aaKnown RBP13.2□□□□□ -0.3
HOXA13-202ENST00000518136 PHF12Q96QT6 1004 aa13.2□□□□□ -0.3
HOXA13-202ENST00000518136 TIAM1Q13009 1591 aa13.2□□□□□ -0.3
HOXA13-202ENST00000518136 NUP153P49790 1475 aaKnown RBP13.19□□□□□ -0.3
HOXA13-202ENST00000518136 ADCY10Q96PN6 1610 aa13.18□□□□□ -0.3
HOXA13-202ENST00000518136 RGL2O15211 777 aa13.17□□□□□ -0.3
HOXA13-202ENST00000518136 KIF12Q96FN5 646 aa13.17□□□□□ -0.3
HOXA13-202ENST00000518136 CDK13Q14004 1512 aaKnown RBP13.17□□□□□ -0.3
HOXA13-202ENST00000518136 PTPRGP23470 1445 aa13.16□□□□□ -0.3
HOXA13-202ENST00000518136 MAGI3Q5TCQ9 1506 aa13.16□□□□□ -0.3
HOXA13-202ENST00000518136 EPRSP07814 1512 aaKnown RBP13.14□□□□□ -0.31
HOXA13-202ENST00000518136 MAP3K1Q13233 1512 aa13.14□□□□□ -0.31
HOXA13-202ENST00000518136 ABCC2Q92887 1545 aa13.14□□□□□ -0.31
HOXA13-202ENST00000518136 MAP3K13O43283 966 aa13.14□□□□□ -0.31
HOXA13-202ENST00000518136 TTBK1Q5TCY1 1321 aaPredicted RBP13.13□□□□□ -0.31
HOXA13-202ENST00000518136 PCDHB13Q9Y5F0 798 aa13.13□□□□□ -0.31
HOXA13-202ENST00000518136 UHRF1BP1LA0JNW5 1464 aa13.12□□□□□ -0.31
HOXA13-202ENST00000518136 RNF25Q96BH1 459 aaPredicted RBP13.12□□□□□ -0.31
HOXA13-202ENST00000518136 ZCCHC11Q5TAX3 1644 aaKnown RBP13.12□□□□□ -0.31
HOXA13-202ENST00000518136 UACAQ9BZF9 1416 aa13.12□□□□□ -0.31
HOXA13-202ENST00000518136 SGIP1Q9BQI5 828 aa13.11□□□□□ -0.31
HOXA13-202ENST00000518136 RIOK3O14730 519 aaKnown RBP13.1□□□□□ -0.31
HOXA13-202ENST00000518136 CCDC18Q5T9S5 1454 aa13.1□□□□□ -0.31
HOXA13-202ENST00000518136 ZNF467Q7Z7K2 595 aaPredicted RBP13.09□□□□□ -0.31
HOXA13-202ENST00000518136 ATP10BO94823 1461 aa13.09□□□□□ -0.31
HOXA13-202ENST00000518136 KANK4Q5T7N3 995 aaPredicted RBP13.08□□□□□ -0.32
HOXA13-202ENST00000518136 PCDHB8Q9UN66 801 aa13.08□□□□□ -0.32
HOXA13-202ENST00000518136 LRRC9Q6ZRR7 1453 aa13.08□□□□□ -0.32
HOXA13-202ENST00000518136 KDM5BQ9UGL1 1544 aa13.08□□□□□ -0.32
HOXA13-202ENST00000518136 ARID3CA6NKF2 412 aa13.06□□□□□ -0.32
HOXA13-202ENST00000518136 CLCN6P51797 869 aa13.06□□□□□ -0.32
HOXA13-202ENST00000518136 PPARGC1BQ86YN6 1023 aaKnown RBP13.06□□□□□ -0.32
HOXA13-202ENST00000518136 IFNL1Q8IU54 200 aa13.06□□□□□ -0.32
HOXA13-202ENST00000518136 TAOK2Q9UL54 1235 aa13.05□□□□□ -0.32
HOXA13-202ENST00000518136 KIF14Q15058 1648 aa13.05□□□□□ -0.32
HOXA13-202ENST00000518136 EHBP1L1Q8N3D4 1523 aa13.04□□□□□ -0.32
HOXA13-202ENST00000518136 MS4A3Q96HJ5 214 aa13.04□□□□□ -0.32
HOXA13-202ENST00000518136 SUPT6HQ7KZ85 1726 aaKnown RBP13.02□□□□□ -0.32
HOXA13-202ENST00000518136 VGFO15240 615 aaPredicted RBP13.02□□□□□ -0.33
HOXA13-202ENST00000518136 ATP1B4Q9UN42 357 aaPredicted RBP13.02□□□□□ -0.33
HOXA13-202ENST00000518136 GALR2O43603 387 aaPredicted RBP13□□□□□ -0.33
HOXA13-202ENST00000518136 GABBR2O75899 941 aa13□□□□□ -0.33
HOXA13-202ENST00000518136 SP7Q8TDD2 431 aaPredicted RBP12.99□□□□□ -0.33
HOXA13-202ENST00000518136 CDC42BPAQ5VT25 1732 aa12.99□□□□□ -0.33
HOXA13-202ENST00000518136 TROQ12816 1431 aaPredicted RBP12.98□□□□□ -0.33
HOXA13-202ENST00000518136 PDAP1Q13442 181 aaKnown RBP12.98□□□□□ -0.33
HOXA13-202ENST00000518136 NCOA2Q15596 1464 aa12.97□□□□□ -0.33
HOXA13-202ENST00000518136 TTC37Q6PGP7 1564 aa12.97□□□□□ -0.33
HOXA13-202ENST00000518136 CYB5RLQ6IPT4 315 aa12.96□□□□□ -0.33
HOXA13-202ENST00000518136 ABCC10Q5T3U5 1492 aa12.96□□□□□ -0.34
HOXA13-202ENST00000518136 MTUS2Q5JR59 1369 aa12.95□□□□□ -0.34
HOXA13-202ENST00000518136 PHLDB1Q86UU1 1377 aa12.95□□□□□ -0.34
HOXA13-202ENST00000518136 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.95□□□□□ -0.34
HOXA13-202ENST00000518136 CHGAP10645 457 aaKnown RBP12.95□□□□□ -0.34
HOXA13-202ENST00000518136 PSEN1P49768 467 aa12.95□□□□□ -0.34
HOXA13-202ENST00000518136 ZFP91Q96JP5 570 aaPredicted RBP12.95□□□□□ -0.34
HOXA13-202ENST00000518136 MAPKBP1O60336 1514 aa12.94□□□□□ -0.34
HOXA13-202ENST00000518136 CDC42BPBQ9Y5S2 1711 aa12.94□□□□□ -0.34
HOXA13-202ENST00000518136 DNAJC5Q9H3Z4 198 aa12.93□□□□□ -0.34
HOXA13-202ENST00000518136 TRPC6Q9Y210 931 aa12.93□□□□□ -0.34
HOXA13-202ENST00000518136 ASXL2Q76L83 1435 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms