RNA–Protein interactions for RNA: ENST00000516211.1

SCARNA17.1-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 143 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.1-201ENST00000516211 HRCP23327 699 aa4.56□□□□□ -1.68
SCARNA17.1-201ENST00000516211 RBM26Q5T8P6 1007 aaKnown RBP4.56□□□□□ -1.68
SCARNA17.1-201ENST00000516211 CABP2Q9NPB3 220 aa4.56□□□□□ -1.68
SCARNA17.1-201ENST00000516211 SOCS7O14512 581 aa4.55□□□□□ -1.68
SCARNA17.1-201ENST00000516211 GOLGA2Q08379 1002 aa4.55□□□□□ -1.68
SCARNA17.1-201ENST00000516211 EFCAB3Q8N7B9 438 aa4.55□□□□□ -1.68
SCARNA17.1-201ENST00000516211 FBXO22Q8NEZ5 403 aa4.55□□□□□ -1.68
SCARNA17.1-201ENST00000516211 NCKAP5LQ9HCH0 1330 aa4.54□□□□□ -1.68
SCARNA17.1-201ENST00000516211 ARID3CA6NKF2 412 aa4.54□□□□□ -1.68
SCARNA17.1-201ENST00000516211 SPDYE16A6NNV3 312 aaPredicted RBP4.54□□□□□ -1.68
SCARNA17.1-201ENST00000516211 MKRN3Q13064 507 aaKnown RBP4.54□□□□□ -1.68
SCARNA17.1-201ENST00000516211 PHF8Q9UPP1 1060 aa4.54□□□□□ -1.68
SCARNA17.1-201ENST00000516211 CAMK2BQ13554 666 aa4.53□□□□□ -1.68
SCARNA17.1-201ENST00000516211 CRISPLD2Q9H0B8 497 aa4.53□□□□□ -1.68
SCARNA17.1-201ENST00000516211 MINK1Q8N4C8 1332 aaPredicted RBP4.52□□□□□ -1.69
SCARNA17.1-201ENST00000516211 ERCC6Q03468 1493 aa4.52□□□□□ -1.69
SCARNA17.1-201ENST00000516211 LMTK3Q96Q04 1460 aa4.52□□□□□ -1.69
SCARNA17.1-201ENST00000516211 A6NJR5 290 aa4.52□□□□□ -1.69
SCARNA17.1-201ENST00000516211 REM2Q8IYK8 340 aaPredicted RBP4.52□□□□□ -1.69
SCARNA17.1-201ENST00000516211 KCTD17Q8N5Z5 321 aa4.52□□□□□ -1.69
SCARNA17.1-201ENST00000516211 PCMTD1Q96MG8 357 aaPredicted RBP4.52□□□□□ -1.69
SCARNA17.1-201ENST00000516211 MLLT3P42568 568 aaPredicted RBP4.51□□□□□ -1.69
SCARNA17.1-201ENST00000516211 CYB5RLQ6IPT4 315 aa4.51□□□□□ -1.69
SCARNA17.1-201ENST00000516211 CCDC97Q96F63 343 aaPredicted RBP4.51□□□□□ -1.69
SCARNA17.1-201ENST00000516211 FAM117AQ9C073 453 aa4.51□□□□□ -1.69
SCARNA17.1-201ENST00000516211 C1orf115Q9H7X2 142 aa4.51□□□□□ -1.69
SCARNA17.1-201ENST00000516211 GOPCQ9HD26 462 aa4.51□□□□□ -1.69
SCARNA17.1-201ENST00000516211 EIF4G1Q04637 1599 aaKnown RBP4.51□□□□□ -1.69
SCARNA17.1-201ENST00000516211 RAD21O60216 631 aa4.5□□□□□ -1.69
SCARNA17.1-201ENST00000516211 MAP2K5Q13163 448 aa4.5□□□□□ -1.69
SCARNA17.1-201ENST00000516211 PPP1R15BQ5SWA1 713 aa4.5□□□□□ -1.69
SCARNA17.1-201ENST00000516211 CCDC82Q8N4S0 544 aa4.5□□□□□ -1.69
SCARNA17.1-201ENST00000516211 KDM4FA0A1W2PPD8 638 aa4.49□□□□□ -1.69
SCARNA17.1-201ENST00000516211 TRAK2O60296 914 aa4.49□□□□□ -1.69
SCARNA17.1-201ENST00000516211 TTLL12Q14166 644 aaPredicted RBP4.49□□□□□ -1.69
SCARNA17.1-201ENST00000516211 SERPINA10Q9UK55 444 aa4.49□□□□□ -1.69
SCARNA17.1-201ENST00000516211 CCDC61Q9Y6R9 512 aa4.49□□□□□ -1.69
SCARNA17.1-201ENST00000516211 RIMBP3CA6NJZ7 1639 aa4.49□□□□□ -1.69
SCARNA17.1-201ENST00000516211 RIMBP3BA6NNM3 1639 aa4.49□□□□□ -1.69
SCARNA17.1-201ENST00000516211 RIMBP3Q9UFD9 1639 aa4.49□□□□□ -1.69
SCARNA17.1-201ENST00000516211 NUTM2FA1L443 756 aa4.48□□□□□ -1.69
SCARNA17.1-201ENST00000516211 PDE4CQ08493 712 aa4.48□□□□□ -1.69
SCARNA17.1-201ENST00000516211 PDIA6Q15084 440 aa4.48□□□□□ -1.69
SCARNA17.1-201ENST00000516211 AMHR2Q16671 573 aa4.48□□□□□ -1.69
SCARNA17.1-201ENST00000516211 CCDC102AQ96A19 550 aa4.48□□□□□ -1.69
SCARNA17.1-201ENST00000516211 NESP48681 1621 aa4.47□□□□□ -1.69
SCARNA17.1-201ENST00000516211 IFNL1Q8IU54 200 aa4.47□□□□□ -1.69
SCARNA17.1-201ENST00000516211 TRAIPQ9BWF2 469 aa4.47□□□□□ -1.69
SCARNA17.1-201ENST00000516211 ATP1B4Q9UN42 357 aaPredicted RBP4.47□□□□□ -1.69
SCARNA17.1-201ENST00000516211 FARP1Q9Y4F1 1045 aaPredicted RBP4.47□□□□□ -1.69
SCARNA17.1-201ENST00000516211 PLEKHG3A1L390 1219 aa4.46□□□□□ -1.7
SCARNA17.1-201ENST00000516211 PITPNM1O00562 1244 aa4.46□□□□□ -1.7
SCARNA17.1-201ENST00000516211 DPYSL4O14531 572 aa4.46□□□□□ -1.7
SCARNA17.1-201ENST00000516211 IRF6O14896 467 aa4.46□□□□□ -1.7
SCARNA17.1-201ENST00000516211 PROSER2Q86WR7 435 aaPredicted RBP4.46□□□□□ -1.7
SCARNA17.1-201ENST00000516211 PARP9Q8IXQ6 854 aa4.46□□□□□ -1.7
SCARNA17.1-201ENST00000516211 PATL2C9JE40 543 aaKnown RBP4.45□□□□□ -1.7
SCARNA17.1-201ENST00000516211 GNPATO15228 680 aa4.45□□□□□ -1.7
SCARNA17.1-201ENST00000516211 FCHSD2O94868 740 aa4.45□□□□□ -1.7
SCARNA17.1-201ENST00000516211 HIC1Q14526 733 aa4.45□□□□□ -1.7
SCARNA17.1-201ENST00000516211 WWC1Q8IX03 1113 aa4.45□□□□□ -1.7
SCARNA17.1-201ENST00000516211 CLUAP1Q96AJ1 413 aa4.45□□□□□ -1.7
SCARNA17.1-201ENST00000516211 GPHNQ9NQX3 736 aaPredicted RBP4.45□□□□□ -1.7
SCARNA17.1-201ENST00000516211 MAP3K13O43283 966 aa4.44□□□□□ -1.7
SCARNA17.1-201ENST00000516211 CACNB1Q02641 598 aaPredicted RBP4.44□□□□□ -1.7
SCARNA17.1-201ENST00000516211 TMCO4Q5TGY1 634 aa4.44□□□□□ -1.7
SCARNA17.1-201ENST00000516211 AEBP1Q8IUX7 1158 aa4.44□□□□□ -1.7
SCARNA17.1-201ENST00000516211 NACADO15069 1562 aa4.44□□□□□ -1.7
SCARNA17.1-201ENST00000516211 GRXCR2A6NFK2 248 aa4.43□□□□□ -1.7
SCARNA17.1-201ENST00000516211 ONECUT3O60422 494 aaPredicted RBP4.43□□□□□ -1.7
SCARNA17.1-201ENST00000516211 MCM6Q14566 821 aa4.43□□□□□ -1.7
SCARNA17.1-201ENST00000516211 CHADLQ6NUI6 762 aa4.43□□□□□ -1.7
SCARNA17.1-201ENST00000516211 TMC2Q8TDI7 906 aa4.43□□□□□ -1.7
SCARNA17.1-201ENST00000516211 GPR37O15354 613 aa4.42□□□□□ -1.7
SCARNA17.1-201ENST00000516211 MAP3K9P80192 1104 aa4.42□□□□□ -1.7
SCARNA17.1-201ENST00000516211 SH3D19Q5HYK7 790 aa4.42□□□□□ -1.7
SCARNA17.1-201ENST00000516211 FBXO41Q8TF61 875 aa4.42□□□□□ -1.7
SCARNA17.1-201ENST00000516211 NECTIN2Q92692 538 aa4.42□□□□□ -1.7
SCARNA17.1-201ENST00000516211 MS4A4AQ96JQ5 239 aa4.42□□□□□ -1.7
SCARNA17.1-201ENST00000516211 ZNF777Q9ULD5 760 aaPredicted RBP4.42□□□□□ -1.7
SCARNA17.1-201ENST00000516211 GIGYF2Q6Y7W6 1299 aaKnown RBP4.41□□□□□ -1.7
SCARNA17.1-201ENST00000516211 KIF12Q96FN5 646 aa4.41□□□□□ -1.7
SCARNA17.1-201ENST00000516211 PRM3Q9NNZ6 103 aa4.41□□□□□ -1.7
SCARNA17.1-201ENST00000516211 CCDC180Q9P1Z9 1646 aa4.41□□□□□ -1.7
SCARNA17.1-201ENST00000516211 ACIN1Q9UKV3 1341 aaKnown RBP4.41□□□□□ -1.7
SCARNA17.1-201ENST00000516211 CLCN1P35523 988 aa4.4□□□□□ -1.71
SCARNA17.1-201ENST00000516211 EMILIN3Q9NT22 766 aa4.4□□□□□ -1.71
SCARNA17.1-201ENST00000516211 DISP3Q9P2K9 1392 aa4.4□□□□□ -1.71
SCARNA17.1-201ENST00000516211 G3V3G9 751 aa4.39□□□□□ -1.71
SCARNA17.1-201ENST00000516211 PPP1R15AO75807 674 aaPredicted RBP4.39□□□□□ -1.71
SCARNA17.1-201ENST00000516211 SKIV2LQ15477 1246 aaKnown RBP4.39□□□□□ -1.71
SCARNA17.1-201ENST00000516211 FBXW7Q969H0 707 aa4.39□□□□□ -1.71
SCARNA17.1-201ENST00000516211 TMEM106CQ9BVX2 250 aa4.39□□□□□ -1.71
SCARNA17.1-201ENST00000516211 ARHGEF11O15085 1522 aa4.39□□□□□ -1.71
SCARNA17.1-201ENST00000516211 THOC2Q8NI27 1593 aaKnown RBP4.39□□□□□ -1.71
SCARNA17.1-201ENST00000516211 SPDYE5A6NIY4 337 aa4.38□□□□□ -1.71
SCARNA17.1-201ENST00000516211 TBC1D12O60347 775 aa4.38□□□□□ -1.71
SCARNA17.1-201ENST00000516211 PRKAR2AP13861 404 aaKnown RBP4.38□□□□□ -1.71
SCARNA17.1-201ENST00000516211 FOXK1P85037 733 aa4.38□□□□□ -1.71
SCARNA17.1-201ENST00000516211 DSG2Q14126 1118 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms