RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 CARMIL1Q5VZK9 1371 aa15.45■□□□□ 0.06
CDC42SE2-212ENST00000515533 IQGAP2Q13576 1575 aa15.45■□□□□ 0.06
CDC42SE2-212ENST00000515533 CARMIL2Q6F5E8 1435 aa15.43■□□□□ 0.06
CDC42SE2-212ENST00000515533 POTEB2H3BUK9 544 aa15.42■□□□□ 0.06
CDC42SE2-212ENST00000515533 POTEGQ6S5H5 508 aa15.42■□□□□ 0.06
CDC42SE2-212ENST00000515533 KDM6BO15054 1643 aa15.41■□□□□ 0.06
CDC42SE2-212ENST00000515533 PTPRGP23470 1445 aa15.41■□□□□ 0.06
CDC42SE2-212ENST00000515533 TTBK1Q5TCY1 1321 aaPredicted RBP15.4■□□□□ 0.06
CDC42SE2-212ENST00000515533 TNIKQ9UKE5 1360 aa15.37■□□□□ 0.05
CDC42SE2-212ENST00000515533 ABCC2Q92887 1545 aa15.36■□□□□ 0.05
CDC42SE2-212ENST00000515533 CTTNBP2Q8WZ74 1663 aa15.35■□□□□ 0.05
CDC42SE2-212ENST00000515533 PROM2Q8N271 834 aa15.34■□□□□ 0.05
CDC42SE2-212ENST00000515533 RAPGEF2Q9Y4G8 1499 aa15.33■□□□□ 0.05
CDC42SE2-212ENST00000515533 UHRF1BP1LA0JNW5 1464 aa15.31■□□□□ 0.04
CDC42SE2-212ENST00000515533 DISP1Q96F81 1524 aa15.31■□□□□ 0.04
CDC42SE2-212ENST00000515533 KIAA0556O60303 1618 aa15.3■□□□□ 0.04
CDC42SE2-212ENST00000515533 PPRC1Q5VV67 1664 aaKnown RBP15.3■□□□□ 0.04
CDC42SE2-212ENST00000515533 PLB1Q6P1J6 1458 aa15.3■□□□□ 0.04
CDC42SE2-212ENST00000515533 ASXL2Q76L83 1435 aa15.3■□□□□ 0.04
CDC42SE2-212ENST00000515533 PELP1Q8IZL8 1130 aaKnown RBP15.3■□□□□ 0.04
CDC42SE2-212ENST00000515533 UGGT2Q9NYU1 1516 aa15.3■□□□□ 0.04
CDC42SE2-212ENST00000515533 GLI2P10070 1586 aa15.29■□□□□ 0.04
CDC42SE2-212ENST00000515533 UACAQ9BZF9 1416 aa15.29■□□□□ 0.04
CDC42SE2-212ENST00000515533 ZCCHC11Q5TAX3 1644 aaKnown RBP15.28■□□□□ 0.04
CDC42SE2-212ENST00000515533 MS4A3Q96HJ5 214 aa15.27■□□□□ 0.04
CDC42SE2-212ENST00000515533 PCDH10Q9P2E7 1040 aa15.26■□□□□ 0.03
CDC42SE2-212ENST00000515533 MAP3K4Q9Y6R4 1608 aa15.25■□□□□ 0.03
CDC42SE2-212ENST00000515533 KDM5BQ9UGL1 1544 aa15.24■□□□□ 0.03
CDC42SE2-212ENST00000515533 ASTLQ6HA08 431 aaPredicted RBP15.23■□□□□ 0.03
CDC42SE2-212ENST00000515533 EPRSP07814 1512 aaKnown RBP15.21■□□□□ 0.03
CDC42SE2-212ENST00000515533 TSPYL2Q9H2G4 693 aaPredicted RBP15.2■□□□□ 0.02
CDC42SE2-212ENST00000515533 GOLGA3Q08378 1498 aa15.2■□□□□ 0.02
CDC42SE2-212ENST00000515533 ATMINO43313 823 aaPredicted RBP15.19■□□□□ 0.02
CDC42SE2-212ENST00000515533 TEX14Q8IWB6 1497 aa15.19■□□□□ 0.02
CDC42SE2-212ENST00000515533 METRNQ9UJH8 293 aa15.17■□□□□ 0.02
CDC42SE2-212ENST00000515533 WDR7Q9Y4E6 1490 aa15.16■□□□□ 0.02
CDC42SE2-212ENST00000515533 KDM4FA0A1W2PPD8 638 aa15.16■□□□□ 0.02
CDC42SE2-212ENST00000515533 CCDC61Q9Y6R9 512 aa15.16■□□□□ 0.02
CDC42SE2-212ENST00000515533 CFAP43Q8NDM7 1665 aa15.16■□□□□ 0.02
CDC42SE2-212ENST00000515533 SLC39A7Q92504 469 aa15.14■□□□□ 0.01
CDC42SE2-212ENST00000515533 ABCA8O94911 1581 aa15.13■□□□□ 0.01
CDC42SE2-212ENST00000515533 C7P10643 843 aa15.13■□□□□ 0.01
CDC42SE2-212ENST00000515533 PRXQ9BXM0 1461 aa15.13■□□□□ 0.01
CDC42SE2-212ENST00000515533 LCE2DQ5TA82 110 aaPredicted RBP15.11■□□□□ 0.01
CDC42SE2-212ENST00000515533 ADGRL1O94910 1474 aa15.1■□□□□ 0.01
CDC42SE2-212ENST00000515533 COL17A1Q9UMD9 1497 aaPredicted RBP15.1■□□□□ 0.01
CDC42SE2-212ENST00000515533 FAM9AQ8IZU1 332 aaPredicted RBP15.08■□□□□ 0
CDC42SE2-212ENST00000515533 KIF12Q96FN5 646 aa15.08■□□□□ 0
CDC42SE2-212ENST00000515533 POTEJP0CG39 1038 aa15.07■□□□□ 0
CDC42SE2-212ENST00000515533 CD109Q6YHK3 1445 aa15.06■□□□□ 0
CDC42SE2-212ENST00000515533 ATN1P54259 1190 aaPredicted RBP15.05■□□□□ -0
CDC42SE2-212ENST00000515533 KCNH8Q96L42 1107 aa15.05■□□□□ -0
CDC42SE2-212ENST00000515533 MAGI3Q5TCQ9 1506 aa15.05■□□□□ -0
CDC42SE2-212ENST00000515533 PLEKHG5O94827 1062 aa15.04■□□□□ -0
CDC42SE2-212ENST00000515533 MIER1Q8N108 512 aa15.03■□□□□ -0
CDC42SE2-212ENST00000515533 SAMD9Q5K651 1589 aa15.02■□□□□ -0
CDC42SE2-212ENST00000515533 RAPGEF6Q8TEU7 1601 aa15.01□□□□□ -0.01
CDC42SE2-212ENST00000515533 P3H3Q8IVL6 736 aa15□□□□□ -0.01
CDC42SE2-212ENST00000515533 RASEFQ8IZ41 740 aa15□□□□□ -0.01
CDC42SE2-212ENST00000515533 BMP2KQ9NSY1 1161 aaPredicted RBP14.99□□□□□ -0.01
CDC42SE2-212ENST00000515533 TRPC6Q9Y210 931 aa14.99□□□□□ -0.01
CDC42SE2-212ENST00000515533 KIF21BO75037 1637 aa14.99□□□□□ -0.01
CDC42SE2-212ENST00000515533 ARID3CA6NKF2 412 aa14.98□□□□□ -0.01
CDC42SE2-212ENST00000515533 MAMSTRQ6ZN01 415 aa14.98□□□□□ -0.01
CDC42SE2-212ENST00000515533 ABCA9Q8IUA7 1624 aa14.98□□□□□ -0.01
CDC42SE2-212ENST00000515533 ATP10BO94823 1461 aa14.97□□□□□ -0.01
CDC42SE2-212ENST00000515533 MAP3K13O43283 966 aa14.97□□□□□ -0.01
CDC42SE2-212ENST00000515533 EEA1Q15075 1411 aa14.95□□□□□ -0.02
CDC42SE2-212ENST00000515533 HECW2Q9P2P5 1572 aa14.94□□□□□ -0.02
CDC42SE2-212ENST00000515533 ARAP3Q8WWN8 1544 aa14.93□□□□□ -0.02
CDC42SE2-212ENST00000515533 TIE1P35590 1138 aa14.92□□□□□ -0.02
CDC42SE2-212ENST00000515533 POTEFA5A3E0 1075 aa14.91□□□□□ -0.02
CDC42SE2-212ENST00000515533 PHLDB1Q86UU1 1377 aa14.89□□□□□ -0.03
CDC42SE2-212ENST00000515533 RANGAP1P46060 587 aaPredicted RBP14.89□□□□□ -0.03
CDC42SE2-212ENST00000515533 SCUBE2Q9NQ36 999 aa14.89□□□□□ -0.03
CDC42SE2-212ENST00000515533 PLCD3Q8N3E9 789 aa14.88□□□□□ -0.03
CDC42SE2-212ENST00000515533 FHOD3Q2V2M9 1422 aa14.88□□□□□ -0.03
CDC42SE2-212ENST00000515533 NUP153P49790 1475 aaKnown RBP14.88□□□□□ -0.03
CDC42SE2-212ENST00000515533 NEO1Q92859 1461 aa14.88□□□□□ -0.03
CDC42SE2-212ENST00000515533 EFCAB5A4FU69 1503 aa14.87□□□□□ -0.03
CDC42SE2-212ENST00000515533 CFAP74Q9C0B2 1584 aa14.85□□□□□ -0.03
CDC42SE2-212ENST00000515533 TTLL13PA6NNM8 815 aa14.84□□□□□ -0.03
CDC42SE2-212ENST00000515533 FRMPD1Q5SYB0 1578 aa14.83□□□□□ -0.04
CDC42SE2-212ENST00000515533 FAM163AQ96GL9 167 aaPredicted RBP14.83□□□□□ -0.04
CDC42SE2-212ENST00000515533 ADAMTSL3P82987 1691 aa14.83□□□□□ -0.04
CDC42SE2-212ENST00000515533 RICTORQ6R327 1708 aa14.83□□□□□ -0.04
CDC42SE2-212ENST00000515533 BCORL1Q5H9F3 1711 aa14.82□□□□□ -0.04
CDC42SE2-212ENST00000515533 PLEKHD1A6NEE1 506 aa14.81□□□□□ -0.04
CDC42SE2-212ENST00000515533 RAPGEF3O95398 923 aa14.81□□□□□ -0.04
CDC42SE2-212ENST00000515533 SGIP1Q9BQI5 828 aa14.8□□□□□ -0.04
CDC42SE2-212ENST00000515533 NUBP1P53384 320 aa14.79□□□□□ -0.04
CDC42SE2-212ENST00000515533 TTC37Q6PGP7 1564 aa14.79□□□□□ -0.04
CDC42SE2-212ENST00000515533 ILDR1Q86SU0 546 aaPredicted RBP14.79□□□□□ -0.04
CDC42SE2-212ENST00000515533 ARHGEF40Q8TER5 1519 aa14.79□□□□□ -0.04
CDC42SE2-212ENST00000515533 ZBTB47Q9UFB7 747 aaPredicted RBP14.79□□□□□ -0.04
CDC42SE2-212ENST00000515533 COLQQ9Y215 455 aaPredicted RBP14.79□□□□□ -0.04
CDC42SE2-212ENST00000515533 MADDQ8WXG6 1647 aa14.78□□□□□ -0.04
CDC42SE2-212ENST00000515533 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.78□□□□□ -0.04
CDC42SE2-212ENST00000515533 PCDHB13Q9Y5F0 798 aa14.78□□□□□ -0.04
CDC42SE2-212ENST00000515533 FANCAO15360 1455 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms