RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 EFCAB2Q5VUJ9 269 aa24.81■■□□□ 1.56
DDR1-278ENST00000515233 RIMS1Q86UR5 1692 aaKnown RBP24.81■■□□□ 1.56
DDR1-278ENST00000515233 PCF11O94913 1555 aaKnown RBP24.8■■□□□ 1.56
DDR1-278ENST00000515233 LMTK3Q96Q04 1460 aa24.79■■□□□ 1.56
DDR1-278ENST00000515233 SIGLEC1Q9BZZ2 1709 aa24.78■■□□□ 1.56
DDR1-278ENST00000515233 MYO5CQ9NQX4 1742 aa24.78■■□□□ 1.56
DDR1-278ENST00000515233 TROQ12816 1431 aaPredicted RBP24.75■■□□□ 1.55
DDR1-278ENST00000515233 ATP10AO60312 1499 aa24.73■■□□□ 1.55
DDR1-278ENST00000515233 KIF14Q15058 1648 aa24.72■■□□□ 1.55
DDR1-278ENST00000515233 FBXO41Q8TF61 875 aa24.72■■□□□ 1.55
DDR1-278ENST00000515233 CLIP1P30622 1438 aa24.71■■□□□ 1.55
DDR1-278ENST00000515233 MLECQ14165 292 aa24.69■■□□□ 1.54
DDR1-278ENST00000515233 LRRIQ1Q96JM4 1722 aa24.69■■□□□ 1.54
DDR1-278ENST00000515233 C9orf84Q5VXU9 1444 aa24.69■■□□□ 1.54
DDR1-278ENST00000515233 ZNF518AQ6AHZ1 1483 aa24.68■■□□□ 1.54
DDR1-278ENST00000515233 ARHGAP5Q13017 1502 aa24.66■■□□□ 1.54
DDR1-278ENST00000515233 FER1L4A9Z1Z3 1794 aa24.66■■□□□ 1.54
DDR1-278ENST00000515233 AFAP1Q8N556 730 aa24.65■■□□□ 1.54
DDR1-278ENST00000515233 ARHGEF12Q9NZN5 1544 aa24.65■■□□□ 1.54
DDR1-278ENST00000515233 HSPA2P54652 639 aa24.64■■□□□ 1.54
DDR1-278ENST00000515233 PLPPR3Q6T4P5 718 aa24.64■■□□□ 1.54
DDR1-278ENST00000515233 KDM5CP41229 1560 aa24.63■■□□□ 1.53
DDR1-278ENST00000515233 CASKIN1Q8WXD9 1431 aa24.63■■□□□ 1.53
DDR1-278ENST00000515233 CDC42BPBQ9Y5S2 1711 aa24.62■■□□□ 1.53
DDR1-278ENST00000515233 CCDC18Q5T9S5 1454 aa24.61■■□□□ 1.53
DDR1-278ENST00000515233 MLH3Q9UHC1 1453 aa24.58■■□□□ 1.52
DDR1-278ENST00000515233 REREQ9P2R6 1566 aa24.55■■□□□ 1.52
DDR1-278ENST00000515233 PREX2Q70Z35 1606 aa24.55■■□□□ 1.52
DDR1-278ENST00000515233 MYT1LQ9UL68 1186 aa24.55■■□□□ 1.52
DDR1-278ENST00000515233 DIP2CQ9Y2E4 1556 aa24.54■■□□□ 1.52
DDR1-278ENST00000515233 CEBPAP49715 358 aaPredicted RBP24.53■■□□□ 1.52
DDR1-278ENST00000515233 TRAPPC8Q9Y2L5 1435 aa24.52■■□□□ 1.52
DDR1-278ENST00000515233 ABCC1P33527 1531 aa24.51■■□□□ 1.51
DDR1-278ENST00000515233 FYCO1Q9BQS8 1478 aa24.51■■□□□ 1.51
DDR1-278ENST00000515233 PREX1Q8TCU6 1659 aa24.5■■□□□ 1.51
DDR1-278ENST00000515233 ABCA6Q8N139 1617 aa24.49■■□□□ 1.51
DDR1-278ENST00000515233 AGLP35573 1532 aa24.48■■□□□ 1.51
DDR1-278ENST00000515233 ITSN2Q9NZM3 1697 aa24.48■■□□□ 1.51
DDR1-278ENST00000515233 SETD1BQ9UPS6 1966 aaKnown RBP24.48■■□□□ 1.51
DDR1-278ENST00000515233 CDC42BPAQ5VT25 1732 aa24.47■■□□□ 1.51
DDR1-278ENST00000515233 CERKQ8TCT0 537 aa24.43■■□□□ 1.5
DDR1-278ENST00000515233 KIDINS220Q9ULH0 1771 aa24.43■■□□□ 1.5
DDR1-278ENST00000515233 UHRF1BP1Q6BDS2 1440 aa24.41■■□□□ 1.5
DDR1-278ENST00000515233 GPATCH8Q9UKJ3 1502 aaKnown RBP24.4■■□□□ 1.5
DDR1-278ENST00000515233 ESF1Q9H501 851 aaKnown RBP24.4■■□□□ 1.5
DDR1-278ENST00000515233 DMRT2Q9Y5R5 561 aa24.4■■□□□ 1.5
DDR1-278ENST00000515233 ZNF777Q9ULD5 760 aaPredicted RBP24.39■■□□□ 1.49
DDR1-278ENST00000515233 C3P01024 1663 aa24.38■■□□□ 1.49
DDR1-278ENST00000515233 SAMD9LQ8IVG5 1584 aa24.37■■□□□ 1.49
DDR1-278ENST00000515233 STRCQ7RTU9 1775 aa24.37■■□□□ 1.49
DDR1-278ENST00000515233 CNTLNQ9NXG0 1405 aa24.35■■□□□ 1.49
DDR1-278ENST00000515233 HNRNPMP52272 730 aaKnown RBP eCLIP24.34■■□□□ 1.49
DDR1-278ENST00000515233 KIAA1107Q9UPP5 1409 aa24.34■■□□□ 1.49
DDR1-278ENST00000515233 SPAG9O60271 1321 aaKnown RBP24.34■■□□□ 1.49
DDR1-278ENST00000515233 SYCP2Q9BX26 1530 aa24.33■■□□□ 1.49
DDR1-278ENST00000515233 CFDP1Q9UEE9 299 aaPredicted RBP24.32■■□□□ 1.48
DDR1-278ENST00000515233 PLEKHH2Q8IVE3 1493 aa24.31■■□□□ 1.48
DDR1-278ENST00000515233 CCNB3Q8WWL7 1395 aa24.3■■□□□ 1.48
DDR1-278ENST00000515233 MTUS2Q5JR59 1369 aa24.28■■□□□ 1.48
DDR1-278ENST00000515233 PTPRTO14522 1441 aa24.27■■□□□ 1.48
DDR1-278ENST00000515233 ATP7AQ04656 1500 aa24.26■■□□□ 1.47
DDR1-278ENST00000515233 MROH2AA6NES4 1674 aa24.26■■□□□ 1.47
DDR1-278ENST00000515233 ZMYM3Q14202 1370 aa24.25■■□□□ 1.47
DDR1-278ENST00000515233 NPATQ14207 1427 aa24.24■■□□□ 1.47
DDR1-278ENST00000515233 SUPT6HQ7KZ85 1726 aaKnown RBP24.24■■□□□ 1.47
DDR1-278ENST00000515233 INO80Q9ULG1 1556 aaPredicted RBP24.23■■□□□ 1.47
DDR1-278ENST00000515233 PLXNC1O60486 1568 aa24.22■■□□□ 1.47
DDR1-278ENST00000515233 A2MP01023 1474 aa24.22■■□□□ 1.47
DDR1-278ENST00000515233 PPP6R1Q9UPN7 881 aa24.18■■□□□ 1.46
DDR1-278ENST00000515233 NCOA1Q15788 1441 aa24.18■■□□□ 1.46
DDR1-278ENST00000515233 TIAM1Q13009 1591 aa24.17■■□□□ 1.46
DDR1-278ENST00000515233 ZNF644Q9H582 1327 aaPredicted RBP24.17■■□□□ 1.46
DDR1-278ENST00000515233 EHBP1L1Q8N3D4 1523 aa24.17■■□□□ 1.46
DDR1-278ENST00000515233 MBD5Q9P267 1494 aa24.17■■□□□ 1.46
DDR1-278ENST00000515233 CEP162Q5TB80 1403 aa24.16■■□□□ 1.46
DDR1-278ENST00000515233 GGT6Q6P531 493 aa24.15■■□□□ 1.46
DDR1-278ENST00000515233 CLTCQ00610 1675 aaKnown RBP24.15■■□□□ 1.46
DDR1-278ENST00000515233 ADGBQ8N7X0 1667 aa24.15■■□□□ 1.46
DDR1-278ENST00000515233 RTEL1-TNFRSF6BF6WH68 1400 aa24.14■■□□□ 1.45
DDR1-278ENST00000515233 CAMSAP1Q5T5Y3 1602 aa24.12■■□□□ 1.45
DDR1-278ENST00000515233 LTBP4Q8N2S1 1624 aa24.11■■□□□ 1.45
DDR1-278ENST00000515233 PTPRKQ15262 1439 aa24.1■■□□□ 1.45
DDR1-278ENST00000515233 DHX29Q7Z478 1369 aaKnown RBP24.08■■□□□ 1.45
DDR1-278ENST00000515233 RSPH4AQ5TD94 716 aa24.08■■□□□ 1.45
DDR1-278ENST00000515233 IQSEC2Q5JU85 1478 aa24.07■■□□□ 1.44
DDR1-278ENST00000515233 ZNF142P52746 1687 aaPredicted RBP24.06■■□□□ 1.44
DDR1-278ENST00000515233 PLA2R1Q13018 1463 aa24.06■■□□□ 1.44
DDR1-278ENST00000515233 MYO3AQ8NEV4 1616 aa24.05■■□□□ 1.44
DDR1-278ENST00000515233 NCKAP5LQ9HCH0 1330 aa24.05■■□□□ 1.44
DDR1-278ENST00000515233 PKD2Q13563 968 aa24.04■■□□□ 1.44
DDR1-278ENST00000515233 NCOA2Q15596 1464 aa24.03■■□□□ 1.44
DDR1-278ENST00000515233 CEP170BQ9Y4F5 1589 aaPredicted RBP24.03■■□□□ 1.44
DDR1-278ENST00000515233 CCDC141Q6ZP82 1450 aa24.01■■□□□ 1.43
DDR1-278ENST00000515233 TCOF1Q13428 1488 aaKnown RBP24■■□□□ 1.43
DDR1-278ENST00000515233 CAMSAP2Q08AD1 1489 aa24■■□□□ 1.43
DDR1-278ENST00000515233 KIF3BO15066 747 aa23.99■■□□□ 1.43
DDR1-278ENST00000515233 A2ML1A8K2U0 1454 aa23.96■■□□□ 1.43
DDR1-278ENST00000515233 FAM135AQ9P2D6 1515 aa23.95■■□□□ 1.43
DDR1-278ENST00000515233 ZNF335Q9H4Z2 1342 aaPredicted RBP23.95■■□□□ 1.42
DDR1-278ENST00000515233 TSPY4P0CV99 314 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms