RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 EIF4G1Q04637 1599 aaKnown RBP20.54■□□□□ 0.88
TRIM41-207ENST00000515223 TPRNQ4KMQ1 711 aa20.54■□□□□ 0.88
TRIM41-207ENST00000515223 SAFB2Q14151 953 aaKnown RBP eCLIP20.54■□□□□ 0.88
TRIM41-207ENST00000515223 HDGFL2Q7Z4V5 671 aaPredicted RBP20.53■□□□□ 0.88
TRIM41-207ENST00000515223 MORC1Q86VD1 984 aa20.53■□□□□ 0.88
TRIM41-207ENST00000515223 CSB-PGBD3P0DP91 1061 aa20.53■□□□□ 0.88
TRIM41-207ENST00000515223 RUSC2Q8N2Y8 1516 aa20.52■□□□□ 0.88
TRIM41-207ENST00000515223 CARMIL1Q5VZK9 1371 aa20.51■□□□□ 0.87
TRIM41-207ENST00000515223 CARMIL2Q6F5E8 1435 aa20.51■□□□□ 0.87
TRIM41-207ENST00000515223 DHX57Q6P158 1386 aaKnown RBP20.51■□□□□ 0.87
TRIM41-207ENST00000515223 PAK3O75914 559 aaPredicted RBP20.5■□□□□ 0.87
TRIM41-207ENST00000515223 STK26Q9P289 416 aa20.5■□□□□ 0.87
TRIM41-207ENST00000515223 ISY1Q9ULR0 285 aaKnown RBP20.5■□□□□ 0.87
TRIM41-207ENST00000515223 TMX4Q9H1E5 349 aaPredicted RBP20.49■□□□□ 0.87
TRIM41-207ENST00000515223 TIMELESSQ9UNS1 1208 aa20.49■□□□□ 0.87
TRIM41-207ENST00000515223 RGS3P49796 1198 aa20.48■□□□□ 0.87
TRIM41-207ENST00000515223 EFCAB2Q5VUJ9 269 aa20.47■□□□□ 0.87
TRIM41-207ENST00000515223 GOLGA6L6A8MZA4 724 aa20.46■□□□□ 0.87
TRIM41-207ENST00000515223 FOXD1Q16676 465 aa20.46■□□□□ 0.87
TRIM41-207ENST00000515223 CUX2O14529 1486 aa20.45■□□□□ 0.86
TRIM41-207ENST00000515223 NRDCO43847 1150 aa20.45■□□□□ 0.86
TRIM41-207ENST00000515223 CCDC9Q9Y3X0 531 aaKnown RBP20.45■□□□□ 0.86
TRIM41-207ENST00000515223 CHMP4AQ9BY43 222 aa20.44■□□□□ 0.86
TRIM41-207ENST00000515223 DNTTIP2Q5QJE6 756 aaKnown RBP20.44■□□□□ 0.86
TRIM41-207ENST00000515223 GOLGA6L4A6NEF3 574 aa20.43■□□□□ 0.86
TRIM41-207ENST00000515223 HSP90AB1P08238 724 aaKnown RBP20.43■□□□□ 0.86
TRIM41-207ENST00000515223 RAPGEF2Q9Y4G8 1499 aa20.42■□□□□ 0.86
TRIM41-207ENST00000515223 MCCP23508 829 aa20.42■□□□□ 0.86
TRIM41-207ENST00000515223 ARHGAP35Q9NRY4 1499 aa20.41■□□□□ 0.86
TRIM41-207ENST00000515223 CLSTN1O94985 981 aa20.41■□□□□ 0.86
TRIM41-207ENST00000515223 PLCB2Q00722 1185 aa20.4■□□□□ 0.86
TRIM41-207ENST00000515223 EID1Q9Y6B2 187 aa20.4■□□□□ 0.86
TRIM41-207ENST00000515223 CFAP44Q96MT7 982 aa20.4■□□□□ 0.86
TRIM41-207ENST00000515223 ZNF330Q9Y3S2 320 aaPredicted RBP20.4■□□□□ 0.86
TRIM41-207ENST00000515223 TOP2AP11388 1531 aaKnown RBP20.4■□□□□ 0.86
TRIM41-207ENST00000515223 CALD1Q05682 793 aaKnown RBP20.39■□□□□ 0.86
TRIM41-207ENST00000515223 PDS5BQ9NTI5 1447 aa20.38■□□□□ 0.85
TRIM41-207ENST00000515223 IPO8O15397 1037 aaKnown RBP20.36■□□□□ 0.85
TRIM41-207ENST00000515223 PKD2Q13563 968 aa20.36■□□□□ 0.85
TRIM41-207ENST00000515223 ERICH6BQ5W0A0 696 aa20.31■□□□□ 0.84
TRIM41-207ENST00000515223 GNL2Q13823 731 aaKnown RBP20.31■□□□□ 0.84
TRIM41-207ENST00000515223 KIAA1211Q6ZU35 1233 aa20.31■□□□□ 0.84
TRIM41-207ENST00000515223 U2AF1L5P0DN76 240 aaPredicted RBP20.29■□□□□ 0.84
TRIM41-207ENST00000515223 U2AF1Q01081 240 aaKnown RBP eCLIP20.29■□□□□ 0.84
TRIM41-207ENST00000515223 HDAC5Q9UQL6 1122 aa20.29■□□□□ 0.84
TRIM41-207ENST00000515223 HSCBQ8IWL3 235 aa20.29■□□□□ 0.84
TRIM41-207ENST00000515223 KIF3BO15066 747 aa20.29■□□□□ 0.84
TRIM41-207ENST00000515223 NCBP3Q53F19 620 aaKnown RBP20.28■□□□□ 0.84
TRIM41-207ENST00000515223 SPAG9O60271 1321 aaKnown RBP20.28■□□□□ 0.84
TRIM41-207ENST00000515223 NAP1L5Q96NT1 182 aaPredicted RBP20.27■□□□□ 0.84
TRIM41-207ENST00000515223 NGDNQ8NEJ9 315 aaKnown RBP20.27■□□□□ 0.84
TRIM41-207ENST00000515223 STK31Q9BXU1 1019 aa20.26■□□□□ 0.83
TRIM41-207ENST00000515223 GORABQ5T7V8 394 aa20.26■□□□□ 0.83
TRIM41-207ENST00000515223 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.26■□□□□ 0.83
TRIM41-207ENST00000515223 KTN1Q86UP2 1357 aaKnown RBP20.26■□□□□ 0.83
TRIM41-207ENST00000515223 TERF2IPQ9NYB0 399 aa20.26■□□□□ 0.83
TRIM41-207ENST00000515223 G3V3G9 751 aa20.26■□□□□ 0.83
TRIM41-207ENST00000515223 DCAF8Q5TAQ9 597 aa20.26■□□□□ 0.83
TRIM41-207ENST00000515223 TAF7LQ5H9L4 462 aa20.25■□□□□ 0.83
TRIM41-207ENST00000515223 IPO9Q96P70 1041 aaKnown RBP20.24■□□□□ 0.83
TRIM41-207ENST00000515223 NUP155O75694 1391 aa20.24■□□□□ 0.83
TRIM41-207ENST00000515223 ANKRD30AQ9BXX3 1397 aa20.24■□□□□ 0.83
TRIM41-207ENST00000515223 EIF3AQ14152 1382 aaKnown RBP20.23■□□□□ 0.83
TRIM41-207ENST00000515223 WASHC2CQ9Y4E1 1318 aa20.23■□□□□ 0.83
TRIM41-207ENST00000515223 MPHOSPH9Q99550 1183 aa20.23■□□□□ 0.83
TRIM41-207ENST00000515223 APBB1O00213 710 aa20.22■□□□□ 0.83
TRIM41-207ENST00000515223 RCAN3Q9UKA8 241 aa20.22■□□□□ 0.83
TRIM41-207ENST00000515223 L1TD1Q5T7N2 865 aaKnown RBP20.21■□□□□ 0.83
TRIM41-207ENST00000515223 ROCK2O75116 1388 aaKnown RBP20.21■□□□□ 0.83
TRIM41-207ENST00000515223 RSPH4AQ5TD94 716 aa20.2■□□□□ 0.82
TRIM41-207ENST00000515223 SPRYD3Q8NCJ5 442 aa20.2■□□□□ 0.82
TRIM41-207ENST00000515223 TDRD9Q8NDG6 1382 aaKnown RBP20.2■□□□□ 0.82
TRIM41-207ENST00000515223 CHMP3Q9Y3E7 222 aa20.2■□□□□ 0.82
TRIM41-207ENST00000515223 GTF2E1P29083 439 aaPredicted RBP20.19■□□□□ 0.82
TRIM41-207ENST00000515223 L3MBTL2Q969R5 705 aa20.19■□□□□ 0.82
TRIM41-207ENST00000515223 AMPHP49418 695 aa20.18■□□□□ 0.82
TRIM41-207ENST00000515223 FMN1Q68DA7 1419 aa20.18■□□□□ 0.82
TRIM41-207ENST00000515223 GPATCH3Q96I76 525 aa20.16■□□□□ 0.82
TRIM41-207ENST00000515223 FHOD3Q2V2M9 1422 aa20.15■□□□□ 0.82
TRIM41-207ENST00000515223 CHAF1AQ13111 956 aaPredicted RBP20.15■□□□□ 0.82
TRIM41-207ENST00000515223 TCERG1O14776 1098 aaKnown RBP20.15■□□□□ 0.82
TRIM41-207ENST00000515223 ITPRIPQ8IWB1 547 aa20.13■□□□□ 0.81
TRIM41-207ENST00000515223 HTATSF1O43719 755 aaKnown RBP20.13■□□□□ 0.81
TRIM41-207ENST00000515223 RALBP1Q15311 655 aa20.13■□□□□ 0.81
TRIM41-207ENST00000515223 LMOD3Q0VAK6 560 aa20.13■□□□□ 0.81
TRIM41-207ENST00000515223 RWDD1Q9H446 243 aaPredicted RBP20.12■□□□□ 0.81
TRIM41-207ENST00000515223 HMMRO75330 724 aa20.12■□□□□ 0.81
TRIM41-207ENST00000515223 KIAA2012Q0VF49 1180 aa20.12■□□□□ 0.81
TRIM41-207ENST00000515223 FANCIQ9NVI1 1328 aa20.11■□□□□ 0.81
TRIM41-207ENST00000515223 FRAT2O75474 233 aaPredicted RBP20.1■□□□□ 0.81
TRIM41-207ENST00000515223 CCDC34Q96HJ3 373 aa20.1■□□□□ 0.81
TRIM41-207ENST00000515223 DRC7Q8IY82 874 aa20.1■□□□□ 0.81
TRIM41-207ENST00000515223 HNRNPMP52272 730 aaKnown RBP eCLIP20.09■□□□□ 0.81
TRIM41-207ENST00000515223 LTV1Q96GA3 475 aaPredicted RBP20.09■□□□□ 0.81
TRIM41-207ENST00000515223 SMARCA4P51532 1647 aa20.09■□□□□ 0.81
TRIM41-207ENST00000515223 NUTM2DQ5VT03 806 aaPredicted RBP20.06■□□□□ 0.8
TRIM41-207ENST00000515223 SLKQ9H2G2 1235 aaPredicted RBP20.06■□□□□ 0.8
TRIM41-207ENST00000515223 SMARCA2P51531 1590 aa20.06■□□□□ 0.8
TRIM41-207ENST00000515223 NUTM2FA1L443 756 aa20.06■□□□□ 0.8
TRIM41-207ENST00000515223 PRKRIP1Q9H875 184 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms