RNA–Protein interactions for RNA: ENST00000514627.5

YIPF3-217, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-217ENST00000514627 CASKIN1Q8WXD9 1431 aa20.4■□□□□ 0.86
YIPF3-217ENST00000514627 YEATS2Q9ULM3 1422 aa20.4■□□□□ 0.86
YIPF3-217ENST00000514627 KIF14Q15058 1648 aa20.38■□□□□ 0.85
YIPF3-217ENST00000514627 ILDR1Q86SU0 546 aaPredicted RBP20.37■□□□□ 0.85
YIPF3-217ENST00000514627 CCDC18Q5T9S5 1454 aa20.37■□□□□ 0.85
YIPF3-217ENST00000514627 MADDQ8WXG6 1647 aa20.36■□□□□ 0.85
YIPF3-217ENST00000514627 MYO5CQ9NQX4 1742 aa20.35■□□□□ 0.85
YIPF3-217ENST00000514627 ATP10AO60312 1499 aa20.34■□□□□ 0.85
YIPF3-217ENST00000514627 ZNF518AQ6AHZ1 1483 aa20.33■□□□□ 0.85
YIPF3-217ENST00000514627 ARHGAP5Q13017 1502 aa20.32■□□□□ 0.84
YIPF3-217ENST00000514627 AFAP1Q8N556 730 aa20.31■□□□□ 0.84
YIPF3-217ENST00000514627 FYCO1Q9BQS8 1478 aa20.3■□□□□ 0.84
YIPF3-217ENST00000514627 C9orf84Q5VXU9 1444 aa20.29■□□□□ 0.84
YIPF3-217ENST00000514627 MLECQ14165 292 aa20.29■□□□□ 0.84
YIPF3-217ENST00000514627 PCF11O94913 1555 aaKnown RBP20.29■□□□□ 0.84
YIPF3-217ENST00000514627 LRRIQ1Q96JM4 1722 aa20.27■□□□□ 0.83
YIPF3-217ENST00000514627 RIMS1Q86UR5 1692 aaKnown RBP20.26■□□□□ 0.83
YIPF3-217ENST00000514627 LMTK3Q96Q04 1460 aa20.26■□□□□ 0.83
YIPF3-217ENST00000514627 KDM5CP41229 1560 aa20.25■□□□□ 0.83
YIPF3-217ENST00000514627 MYT1LQ9UL68 1186 aa20.25■□□□□ 0.83
YIPF3-217ENST00000514627 MLH3Q9UHC1 1453 aa20.24■□□□□ 0.83
YIPF3-217ENST00000514627 SIGLEC1Q9BZZ2 1709 aa20.23■□□□□ 0.83
YIPF3-217ENST00000514627 ARHGEF12Q9NZN5 1544 aa20.22■□□□□ 0.83
YIPF3-217ENST00000514627 PLPPR3Q6T4P5 718 aa20.21■□□□□ 0.83
YIPF3-217ENST00000514627 PREX2Q70Z35 1606 aa20.2■□□□□ 0.82
YIPF3-217ENST00000514627 CDC42BPBQ9Y5S2 1711 aa20.2■□□□□ 0.82
YIPF3-217ENST00000514627 TRAPPC8Q9Y2L5 1435 aa20.19■□□□□ 0.82
YIPF3-217ENST00000514627 ABCC1P33527 1531 aa20.18■□□□□ 0.82
YIPF3-217ENST00000514627 REREQ9P2R6 1566 aa20.17■□□□□ 0.82
YIPF3-217ENST00000514627 HSPA2P54652 639 aa20.16■□□□□ 0.82
YIPF3-217ENST00000514627 GPATCH8Q9UKJ3 1502 aaKnown RBP20.16■□□□□ 0.82
YIPF3-217ENST00000514627 ZNF777Q9ULD5 760 aaPredicted RBP20.15■□□□□ 0.82
YIPF3-217ENST00000514627 DIP2CQ9Y2E4 1556 aa20.15■□□□□ 0.82
YIPF3-217ENST00000514627 FER1L4A9Z1Z3 1794 aa20.15■□□□□ 0.82
YIPF3-217ENST00000514627 FBXO41Q8TF61 875 aa20.14■□□□□ 0.81
YIPF3-217ENST00000514627 AGLP35573 1532 aa20.13■□□□□ 0.81
YIPF3-217ENST00000514627 CFDP1Q9UEE9 299 aaPredicted RBP20.13■□□□□ 0.81
YIPF3-217ENST00000514627 KIAA1107Q9UPP5 1409 aa20.12■□□□□ 0.81
YIPF3-217ENST00000514627 MTUS2Q5JR59 1369 aa20.12■□□□□ 0.81
YIPF3-217ENST00000514627 CEBPAP49715 358 aaPredicted RBP20.12■□□□□ 0.81
YIPF3-217ENST00000514627 ESF1Q9H501 851 aaKnown RBP20.12■□□□□ 0.81
YIPF3-217ENST00000514627 CCNB3Q8WWL7 1395 aa20.11■□□□□ 0.81
YIPF3-217ENST00000514627 CDC42BPAQ5VT25 1732 aa20.11■□□□□ 0.81
YIPF3-217ENST00000514627 PLEKHH2Q8IVE3 1493 aa20.11■□□□□ 0.81
YIPF3-217ENST00000514627 ITSN2Q9NZM3 1697 aa20.1■□□□□ 0.81
YIPF3-217ENST00000514627 SPAG9O60271 1321 aaKnown RBP20.1■□□□□ 0.81
YIPF3-217ENST00000514627 ABCA6Q8N139 1617 aa20.09■□□□□ 0.81
YIPF3-217ENST00000514627 HNRNPMP52272 730 aaKnown RBP eCLIP20.09■□□□□ 0.81
YIPF3-217ENST00000514627 SAMD9LQ8IVG5 1584 aa20.07■□□□□ 0.8
YIPF3-217ENST00000514627 CEP162Q5TB80 1403 aa20.06■□□□□ 0.8
YIPF3-217ENST00000514627 KIDINS220Q9ULH0 1771 aa20.06■□□□□ 0.8
YIPF3-217ENST00000514627 CNTLNQ9NXG0 1405 aa20.05■□□□□ 0.8
YIPF3-217ENST00000514627 SYCP2Q9BX26 1530 aa20.04■□□□□ 0.8
YIPF3-217ENST00000514627 UHRF1BP1Q6BDS2 1440 aa20.03■□□□□ 0.8
YIPF3-217ENST00000514627 DMRT2Q9Y5R5 561 aa20.03■□□□□ 0.8
YIPF3-217ENST00000514627 PREX1Q8TCU6 1659 aa20.02■□□□□ 0.8
YIPF3-217ENST00000514627 SETD1BQ9UPS6 1966 aaKnown RBP20.01■□□□□ 0.79
YIPF3-217ENST00000514627 EHBP1L1Q8N3D4 1523 aa20■□□□□ 0.79
YIPF3-217ENST00000514627 ATP7AQ04656 1500 aa19.98■□□□□ 0.79
YIPF3-217ENST00000514627 ZNF644Q9H582 1327 aaPredicted RBP19.97■□□□□ 0.79
YIPF3-217ENST00000514627 CERKQ8TCT0 537 aa19.96■□□□□ 0.79
YIPF3-217ENST00000514627 PPP6R1Q9UPN7 881 aa19.96■□□□□ 0.79
YIPF3-217ENST00000514627 A2MP01023 1474 aa19.96■□□□□ 0.79
YIPF3-217ENST00000514627 TIAM1Q13009 1591 aa19.95■□□□□ 0.78
YIPF3-217ENST00000514627 ZMYM3Q14202 1370 aa19.95■□□□□ 0.78
YIPF3-217ENST00000514627 MBD5Q9P267 1494 aa19.94■□□□□ 0.78
YIPF3-217ENST00000514627 RSPH4AQ5TD94 716 aa19.94■□□□□ 0.78
YIPF3-217ENST00000514627 INO80Q9ULG1 1556 aaPredicted RBP19.94■□□□□ 0.78
YIPF3-217ENST00000514627 C3P01024 1663 aa19.94■□□□□ 0.78
YIPF3-217ENST00000514627 RTEL1-TNFRSF6BF6WH68 1400 aa19.93■□□□□ 0.78
YIPF3-217ENST00000514627 NPATQ14207 1427 aa19.93■□□□□ 0.78
YIPF3-217ENST00000514627 PLXNC1O60486 1568 aa19.92■□□□□ 0.78
YIPF3-217ENST00000514627 GGT6Q6P531 493 aa19.9■□□□□ 0.78
YIPF3-217ENST00000514627 NCOA2Q15596 1464 aa19.9■□□□□ 0.78
YIPF3-217ENST00000514627 PTPRTO14522 1441 aa19.89■□□□□ 0.77
YIPF3-217ENST00000514627 MROH2AA6NES4 1674 aa19.88■□□□□ 0.77
YIPF3-217ENST00000514627 LOC105371045A0A1W2PR82 267 aa19.88■□□□□ 0.77
YIPF3-217ENST00000514627 VPS8Q8N3P4 1428 aa19.87■□□□□ 0.77
YIPF3-217ENST00000514627 DHX29Q7Z478 1369 aaKnown RBP19.87■□□□□ 0.77
YIPF3-217ENST00000514627 SUPT6HQ7KZ85 1726 aaKnown RBP19.87■□□□□ 0.77
YIPF3-217ENST00000514627 STRCQ7RTU9 1775 aa19.85■□□□□ 0.77
YIPF3-217ENST00000514627 CCDC141Q6ZP82 1450 aa19.85■□□□□ 0.77
YIPF3-217ENST00000514627 ADGBQ8N7X0 1667 aa19.84■□□□□ 0.77
YIPF3-217ENST00000514627 TSPY4P0CV99 314 aa19.83■□□□□ 0.77
YIPF3-217ENST00000514627 TSPY10P0CW01 314 aa19.83■□□□□ 0.77
YIPF3-217ENST00000514627 PTPRKQ15262 1439 aa19.83■□□□□ 0.76
YIPF3-217ENST00000514627 NCOA1Q15788 1441 aa19.83■□□□□ 0.76
YIPF3-217ENST00000514627 CAMSAP2Q08AD1 1489 aa19.82■□□□□ 0.76
YIPF3-217ENST00000514627 LRRC9Q6ZRR7 1453 aa19.82■□□□□ 0.76
YIPF3-217ENST00000514627 KIF3BO15066 747 aa19.8■□□□□ 0.76
YIPF3-217ENST00000514627 MAP3K1Q13233 1512 aa19.8■□□□□ 0.76
YIPF3-217ENST00000514627 CLTCQ00610 1675 aaKnown RBP19.79■□□□□ 0.76
YIPF3-217ENST00000514627 PKD2Q13563 968 aa19.77■□□□□ 0.76
YIPF3-217ENST00000514627 ARHGEF5Q12774 1597 aa19.77■□□□□ 0.76
YIPF3-217ENST00000514627 CAMSAP1Q5T5Y3 1602 aa19.76■□□□□ 0.75
YIPF3-217ENST00000514627 FAM135AQ9P2D6 1515 aa19.76■□□□□ 0.75
YIPF3-217ENST00000514627 KANK4Q5T7N3 995 aaPredicted RBP19.75■□□□□ 0.75
YIPF3-217ENST00000514627 PLA2R1Q13018 1463 aa19.74■□□□□ 0.75
YIPF3-217ENST00000514627 MIA2Q96PC5 1412 aa19.74■□□□□ 0.75
YIPF3-217ENST00000514627 WASHC2CQ9Y4E1 1318 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms