RNA–Protein interactions for RNA: ENST00000514478.1

COPG1-209, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 3

Gene COPG1, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-209ENST00000514478 MYO5CQ9NQX4 1742 aa13.39□□□□□ -0.27
COPG1-209ENST00000514478 ILDR1Q86SU0 546 aaPredicted RBP13.38□□□□□ -0.27
COPG1-209ENST00000514478 KDM5BQ9UGL1 1544 aa13.38□□□□□ -0.27
COPG1-209ENST00000514478 CDC42BPBQ9Y5S2 1711 aa13.35□□□□□ -0.27
COPG1-209ENST00000514478 HECW2Q9P2P5 1572 aa13.34□□□□□ -0.27
COPG1-209ENST00000514478 MIA2Q96PC5 1412 aa13.34□□□□□ -0.27
COPG1-209ENST00000514478 PREX2Q70Z35 1606 aa13.34□□□□□ -0.27
COPG1-209ENST00000514478 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.33□□□□□ -0.27
COPG1-209ENST00000514478 TCOF1Q13428 1488 aaKnown RBP13.33□□□□□ -0.28
COPG1-209ENST00000514478 TTC37Q6PGP7 1564 aa13.32□□□□□ -0.28
COPG1-209ENST00000514478 GPATCH8Q9UKJ3 1502 aaKnown RBP13.31□□□□□ -0.28
COPG1-209ENST00000514478 KCNH8Q96L42 1107 aa13.31□□□□□ -0.28
COPG1-209ENST00000514478 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.3□□□□□ -0.28
COPG1-209ENST00000514478 WDR7Q9Y4E6 1490 aa13.29□□□□□ -0.28
COPG1-209ENST00000514478 DNMT1P26358 1616 aaKnown RBP13.29□□□□□ -0.28
COPG1-209ENST00000514478 CROCC2H7BZ55 1655 aa13.29□□□□□ -0.28
COPG1-209ENST00000514478 ADGBQ8N7X0 1667 aa13.29□□□□□ -0.28
COPG1-209ENST00000514478 CFDP1Q9UEE9 299 aaPredicted RBP13.29□□□□□ -0.28
COPG1-209ENST00000514478 ZNF777Q9ULD5 760 aaPredicted RBP13.29□□□□□ -0.28
COPG1-209ENST00000514478 CAMSAP2Q08AD1 1489 aa13.29□□□□□ -0.28
COPG1-209ENST00000514478 CCER1Q8TC90 406 aaPredicted RBP13.27□□□□□ -0.29
COPG1-209ENST00000514478 ARHGAP5Q13017 1502 aa13.27□□□□□ -0.29
COPG1-209ENST00000514478 GCC2Q8IWJ2 1684 aa13.26□□□□□ -0.29
COPG1-209ENST00000514478 CD109Q6YHK3 1445 aa13.25□□□□□ -0.29
COPG1-209ENST00000514478 HRCP23327 699 aa13.24□□□□□ -0.29
COPG1-209ENST00000514478 ABCA9Q8IUA7 1624 aa13.24□□□□□ -0.29
COPG1-209ENST00000514478 SAMD9LQ8IVG5 1584 aa13.24□□□□□ -0.29
COPG1-209ENST00000514478 SETD5Q9C0A6 1442 aa13.23□□□□□ -0.29
COPG1-209ENST00000514478 DAPK1P53355 1430 aa13.22□□□□□ -0.29
COPG1-209ENST00000514478 ZNF644Q9H582 1327 aaPredicted RBP13.22□□□□□ -0.29
COPG1-209ENST00000514478 CHIC2Q9UKJ5 165 aa13.21□□□□□ -0.29
COPG1-209ENST00000514478 ZEB1P37275 1124 aaPredicted RBP13.2□□□□□ -0.3
COPG1-209ENST00000514478 PTPRKQ15262 1439 aa13.2□□□□□ -0.3
COPG1-209ENST00000514478 ARHGEF5Q12774 1597 aa13.2□□□□□ -0.3
COPG1-209ENST00000514478 RAB3GAP2Q9H2M9 1393 aa13.2□□□□□ -0.3
COPG1-209ENST00000514478 FBXO41Q8TF61 875 aa13.18□□□□□ -0.3
COPG1-209ENST00000514478 ABCC5O15440 1437 aa13.18□□□□□ -0.3
COPG1-209ENST00000514478 PLCH2O75038 1416 aa13.18□□□□□ -0.3
COPG1-209ENST00000514478 CFAP74Q9C0B2 1584 aa13.18□□□□□ -0.3
COPG1-209ENST00000514478 SYCP2Q9BX26 1530 aa13.18□□□□□ -0.3
COPG1-209ENST00000514478 PLEKHH2Q8IVE3 1493 aa13.17□□□□□ -0.3
COPG1-209ENST00000514478 COL17A1Q9UMD9 1497 aaPredicted RBP13.17□□□□□ -0.3
COPG1-209ENST00000514478 ARAP3Q8WWN8 1544 aa13.17□□□□□ -0.3
COPG1-209ENST00000514478 HFM1A2PYH4 1435 aa13.16□□□□□ -0.3
COPG1-209ENST00000514478 EFCAB2Q5VUJ9 269 aa13.16□□□□□ -0.3
COPG1-209ENST00000514478 RRP7BPQ9NSQ0 103 aa13.16□□□□□ -0.3
COPG1-209ENST00000514478 CCDC141Q6ZP82 1450 aa13.15□□□□□ -0.3
COPG1-209ENST00000514478 AKNAQ7Z591 1439 aa13.14□□□□□ -0.31
COPG1-209ENST00000514478 ABCC1P33527 1531 aa13.14□□□□□ -0.31
COPG1-209ENST00000514478 HNRNPMP52272 730 aaKnown RBP eCLIP13.14□□□□□ -0.31
COPG1-209ENST00000514478 SHANK2Q9UPX8 1470 aa13.14□□□□□ -0.31
COPG1-209ENST00000514478 NAIPQ13075 1403 aa13.13□□□□□ -0.31
COPG1-209ENST00000514478 TSPY4P0CV99 314 aa13.13□□□□□ -0.31
COPG1-209ENST00000514478 TSPY10P0CW01 314 aa13.13□□□□□ -0.31
COPG1-209ENST00000514478 FANCAO15360 1455 aa13.12□□□□□ -0.31
COPG1-209ENST00000514478 ROCK1Q13464 1354 aa13.12□□□□□ -0.31
COPG1-209ENST00000514478 C9orf84Q5VXU9 1444 aa13.12□□□□□ -0.31
COPG1-209ENST00000514478 MAST1Q9Y2H9 1570 aa13.11□□□□□ -0.31
COPG1-209ENST00000514478 ADGRL2O95490 1459 aa13.11□□□□□ -0.31
COPG1-209ENST00000514478 ANKRD30AQ9BXX3 1397 aa13.11□□□□□ -0.31
COPG1-209ENST00000514478 RSPH4AQ5TD94 716 aa13.11□□□□□ -0.31
COPG1-209ENST00000514478 ARID4BQ4LE39 1312 aaPredicted RBP13.11□□□□□ -0.31
COPG1-209ENST00000514478 DHX57Q6P158 1386 aaKnown RBP13.1□□□□□ -0.31
COPG1-209ENST00000514478 ADAMTSL3P82987 1691 aa13.1□□□□□ -0.31
COPG1-209ENST00000514478 KIAA1107Q9UPP5 1409 aa13.1□□□□□ -0.31
COPG1-209ENST00000514478 BCORL1Q5H9F3 1711 aa13.1□□□□□ -0.31
COPG1-209ENST00000514478 NEO1Q92859 1461 aa13.1□□□□□ -0.31
COPG1-209ENST00000514478 MBD5Q9P267 1494 aa13.1□□□□□ -0.31
COPG1-209ENST00000514478 POGZQ7Z3K3 1410 aa13.08□□□□□ -0.32
COPG1-209ENST00000514478 PTPRMP28827 1452 aa13.08□□□□□ -0.32
COPG1-209ENST00000514478 TRIM52Q96A61 297 aa13.07□□□□□ -0.32
COPG1-209ENST00000514478 ARHGEF12Q9NZN5 1544 aa13.07□□□□□ -0.32
COPG1-209ENST00000514478 PLXNC1O60486 1568 aa13.07□□□□□ -0.32
COPG1-209ENST00000514478 NCOA1Q15788 1441 aa13.06□□□□□ -0.32
COPG1-209ENST00000514478 MYT1LQ9UL68 1186 aa13.05□□□□□ -0.32
COPG1-209ENST00000514478 RIMS1Q86UR5 1692 aaKnown RBP13.05□□□□□ -0.32
COPG1-209ENST00000514478 ACIN1Q9UKV3 1341 aaKnown RBP13.04□□□□□ -0.32
COPG1-209ENST00000514478 SCAPERQ9BY12 1400 aa13.04□□□□□ -0.32
COPG1-209ENST00000514478 TRAPPC8Q9Y2L5 1435 aa13.04□□□□□ -0.32
COPG1-209ENST00000514478 MADDQ8WXG6 1647 aa13.03□□□□□ -0.32
COPG1-209ENST00000514478 CLSPNQ9HAW4 1339 aa13.03□□□□□ -0.32
COPG1-209ENST00000514478 KIF15Q9NS87 1388 aa13.03□□□□□ -0.32
COPG1-209ENST00000514478 INO80Q9ULG1 1556 aaPredicted RBP13.02□□□□□ -0.33
COPG1-209ENST00000514478 SPAG9O60271 1321 aaKnown RBP13.01□□□□□ -0.33
COPG1-209ENST00000514478 ANKRD50Q9ULJ7 1429 aa13.01□□□□□ -0.33
COPG1-209ENST00000514478 ATP7AQ04656 1500 aa13.01□□□□□ -0.33
COPG1-209ENST00000514478 FER1L4A9Z1Z3 1794 aa13□□□□□ -0.33
COPG1-209ENST00000514478 ZFYVE16Q7Z3T8 1539 aa13□□□□□ -0.33
COPG1-209ENST00000514478 ARHGEF40Q8TER5 1519 aa13□□□□□ -0.33
COPG1-209ENST00000514478 DUOX2Q9NRD8 1548 aa13□□□□□ -0.33
COPG1-209ENST00000514478 KIDINS220Q9ULH0 1771 aa12.99□□□□□ -0.33
COPG1-209ENST00000514478 RICTORQ6R327 1708 aa12.99□□□□□ -0.33
COPG1-209ENST00000514478 DENND4BO75064 1496 aaPredicted RBP12.98□□□□□ -0.33
COPG1-209ENST00000514478 ZNF518AQ6AHZ1 1483 aa12.98□□□□□ -0.33
COPG1-209ENST00000514478 AFAP1Q8N556 730 aa12.98□□□□□ -0.33
COPG1-209ENST00000514478 RTEL1-TNFRSF6BF6WH68 1400 aa12.97□□□□□ -0.33
COPG1-209ENST00000514478 UNC13BO14795 1591 aa12.97□□□□□ -0.33
COPG1-209ENST00000514478 RAPGEF3O95398 923 aa12.96□□□□□ -0.33
COPG1-209ENST00000514478 KDM5CP41229 1560 aa12.95□□□□□ -0.34
COPG1-209ENST00000514478 MAGI2Q86UL8 1455 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms