RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 EHBP1L1Q8N3D4 1523 aa11.07□□□□□ -0.64
CLIP1-205ENST00000514271 KIF14Q15058 1648 aa11.07□□□□□ -0.64
CLIP1-205ENST00000514271 MAGI3Q5TCQ9 1506 aa11.06□□□□□ -0.64
CLIP1-205ENST00000514271 TROQ12816 1431 aaPredicted RBP11.04□□□□□ -0.64
CLIP1-205ENST00000514271 MIER1Q8N108 512 aa11.03□□□□□ -0.64
CLIP1-205ENST00000514271 ITSN2Q9NZM3 1697 aa11.03□□□□□ -0.64
CLIP1-205ENST00000514271 MYO5CQ9NQX4 1742 aa11.02□□□□□ -0.65
CLIP1-205ENST00000514271 PLEKHD1A6NEE1 506 aa11.02□□□□□ -0.65
CLIP1-205ENST00000514271 NEO1Q92859 1461 aa11.01□□□□□ -0.65
CLIP1-205ENST00000514271 SUPT6HQ7KZ85 1726 aaKnown RBP11.01□□□□□ -0.65
CLIP1-205ENST00000514271 CENPBP07199 599 aaPredicted RBP11□□□□□ -0.65
CLIP1-205ENST00000514271 P3H3Q8IVL6 736 aa10.99□□□□□ -0.65
CLIP1-205ENST00000514271 PPRC1Q5VV67 1664 aaKnown RBP10.98□□□□□ -0.65
CLIP1-205ENST00000514271 GCC2Q8IWJ2 1684 aa10.98□□□□□ -0.65
CLIP1-205ENST00000514271 PREX2Q70Z35 1606 aa10.98□□□□□ -0.65
CLIP1-205ENST00000514271 CDK13Q14004 1512 aaKnown RBP10.98□□□□□ -0.65
CLIP1-205ENST00000514271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.97□□□□□ -0.65
CLIP1-205ENST00000514271 PLEKHH2Q8IVE3 1493 aa10.97□□□□□ -0.65
CLIP1-205ENST00000514271 CCER1Q8TC90 406 aaPredicted RBP10.97□□□□□ -0.65
CLIP1-205ENST00000514271 ARXQ96QS3 562 aa10.97□□□□□ -0.65
CLIP1-205ENST00000514271 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.96□□□□□ -0.65
CLIP1-205ENST00000514271 TIMELESSQ9UNS1 1208 aa10.95□□□□□ -0.66
CLIP1-205ENST00000514271 AMER1Q5JTC6 1135 aaPredicted RBP10.95□□□□□ -0.66
CLIP1-205ENST00000514271 CD109Q6YHK3 1445 aa10.95□□□□□ -0.66
CLIP1-205ENST00000514271 SUPT16HQ9Y5B9 1047 aaKnown RBP10.94□□□□□ -0.66
CLIP1-205ENST00000514271 PLCH2O75038 1416 aa10.94□□□□□ -0.66
CLIP1-205ENST00000514271 DENND4BO75064 1496 aaPredicted RBP10.93□□□□□ -0.66
CLIP1-205ENST00000514271 LRRC9Q6ZRR7 1453 aa10.93□□□□□ -0.66
CLIP1-205ENST00000514271 MTUS2Q5JR59 1369 aa10.93□□□□□ -0.66
CLIP1-205ENST00000514271 TTC37Q6PGP7 1564 aa10.92□□□□□ -0.66
CLIP1-205ENST00000514271 CDC42BPAQ5VT25 1732 aa10.92□□□□□ -0.66
CLIP1-205ENST00000514271 FAM69CQ0P6D2 419 aa10.92□□□□□ -0.66
CLIP1-205ENST00000514271 KDM6BO15054 1643 aa10.91□□□□□ -0.66
CLIP1-205ENST00000514271 HNRNPUL2Q1KMD3 747 aaKnown RBP10.9□□□□□ -0.66
CLIP1-205ENST00000514271 TSHZ2Q9NRE2 1034 aa10.9□□□□□ -0.66
CLIP1-205ENST00000514271 MIA2Q96PC5 1412 aa10.9□□□□□ -0.66
CLIP1-205ENST00000514271 RANGAP1P46060 587 aaPredicted RBP10.9□□□□□ -0.66
CLIP1-205ENST00000514271 ZMYM4Q5VZL5 1548 aa10.9□□□□□ -0.66
CLIP1-205ENST00000514271 MAGI2Q86UL8 1455 aa10.89□□□□□ -0.67
CLIP1-205ENST00000514271 CDC42BPBQ9Y5S2 1711 aa10.89□□□□□ -0.67
CLIP1-205ENST00000514271 TRHP20396 242 aaPredicted RBP10.89□□□□□ -0.67
CLIP1-205ENST00000514271 KIAA1107Q9UPP5 1409 aa10.89□□□□□ -0.67
CLIP1-205ENST00000514271 TSPOAP1O95153 1857 aa10.88□□□□□ -0.67
CLIP1-205ENST00000514271 FANCAO15360 1455 aa10.87□□□□□ -0.67
CLIP1-205ENST00000514271 EIF5BO60841 1220 aaKnown RBP10.87□□□□□ -0.67
CLIP1-205ENST00000514271 NCOA2Q15596 1464 aa10.87□□□□□ -0.67
CLIP1-205ENST00000514271 ABCC1P33527 1531 aa10.87□□□□□ -0.67
CLIP1-205ENST00000514271 ARHGEF5Q12774 1597 aa10.87□□□□□ -0.67
CLIP1-205ENST00000514271 ARHGAP5Q13017 1502 aa10.86□□□□□ -0.67
CLIP1-205ENST00000514271 EFCAB2Q5VUJ9 269 aa10.86□□□□□ -0.67
CLIP1-205ENST00000514271 CCNB3Q8WWL7 1395 aa10.86□□□□□ -0.67
CLIP1-205ENST00000514271 RICTORQ6R327 1708 aa10.86□□□□□ -0.67
CLIP1-205ENST00000514271 RSPH4AQ5TD94 716 aa10.85□□□□□ -0.67
CLIP1-205ENST00000514271 REREQ9P2R6 1566 aa10.85□□□□□ -0.67
CLIP1-205ENST00000514271 GPATCH8Q9UKJ3 1502 aaKnown RBP10.85□□□□□ -0.67
CLIP1-205ENST00000514271 PTPN23Q9H3S7 1636 aa10.85□□□□□ -0.67
CLIP1-205ENST00000514271 AKNAQ7Z591 1439 aa10.85□□□□□ -0.67
CLIP1-205ENST00000514271 ATP1B4Q9UN42 357 aaPredicted RBP10.85□□□□□ -0.67
CLIP1-205ENST00000514271 KDM5CP41229 1560 aa10.84□□□□□ -0.67
CLIP1-205ENST00000514271 ZNF518AQ6AHZ1 1483 aa10.83□□□□□ -0.68
CLIP1-205ENST00000514271 MAST1Q9Y2H9 1570 aa10.83□□□□□ -0.68
CLIP1-205ENST00000514271 MYOM3Q5VTT5 1437 aa10.83□□□□□ -0.68
CLIP1-205ENST00000514271 TCOF1Q13428 1488 aaKnown RBP10.83□□□□□ -0.68
CLIP1-205ENST00000514271 KCNA4P22459 653 aa10.83□□□□□ -0.68
CLIP1-205ENST00000514271 ADGRL1O94910 1474 aa10.82□□□□□ -0.68
CLIP1-205ENST00000514271 E9PCH4 1651 aa10.81□□□□□ -0.68
CLIP1-205ENST00000514271 POGZQ7Z3K3 1410 aa10.81□□□□□ -0.68
CLIP1-205ENST00000514271 PPP1R15AO75807 674 aaPredicted RBP10.81□□□□□ -0.68
CLIP1-205ENST00000514271 SAMD9LQ8IVG5 1584 aa10.81□□□□□ -0.68
CLIP1-205ENST00000514271 FAM135AQ9P2D6 1515 aa10.81□□□□□ -0.68
CLIP1-205ENST00000514271 KCNH8Q96L42 1107 aa10.81□□□□□ -0.68
CLIP1-205ENST00000514271 ARHGEF40Q8TER5 1519 aa10.81□□□□□ -0.68
CLIP1-205ENST00000514271 HECW2Q9P2P5 1572 aa10.81□□□□□ -0.68
CLIP1-205ENST00000514271 SHANK2Q9UPX8 1470 aa10.81□□□□□ -0.68
CLIP1-205ENST00000514271 RTEL1-TNFRSF6BF6WH68 1400 aa10.8□□□□□ -0.68
CLIP1-205ENST00000514271 MLH3Q9UHC1 1453 aa10.8□□□□□ -0.68
CLIP1-205ENST00000514271 FRMPD1Q5SYB0 1578 aa10.8□□□□□ -0.68
CLIP1-205ENST00000514271 PPP6R1Q9UPN7 881 aa10.79□□□□□ -0.68
CLIP1-205ENST00000514271 CROCC2H7BZ55 1655 aa10.79□□□□□ -0.68
CLIP1-205ENST00000514271 ADGBQ8N7X0 1667 aa10.79□□□□□ -0.68
CLIP1-205ENST00000514271 ADRA2BP18089 450 aa10.78□□□□□ -0.68
CLIP1-205ENST00000514271 INO80Q9ULG1 1556 aaPredicted RBP10.78□□□□□ -0.68
CLIP1-205ENST00000514271 BCORL1Q5H9F3 1711 aa10.77□□□□□ -0.68
CLIP1-205ENST00000514271 KANK4Q5T7N3 995 aaPredicted RBP10.77□□□□□ -0.68
CLIP1-205ENST00000514271 CCDC141Q6ZP82 1450 aa10.77□□□□□ -0.69
CLIP1-205ENST00000514271 ZFYVE16Q7Z3T8 1539 aa10.77□□□□□ -0.69
CLIP1-205ENST00000514271 CAMSAP2Q08AD1 1489 aa10.77□□□□□ -0.69
CLIP1-205ENST00000514271 PLXNC1O60486 1568 aa10.77□□□□□ -0.69
CLIP1-205ENST00000514271 ANP32EQ9BTT0 268 aa10.76□□□□□ -0.69
CLIP1-205ENST00000514271 DNMT1P26358 1616 aaKnown RBP10.76□□□□□ -0.69
CLIP1-205ENST00000514271 FGD6Q6ZV73 1430 aa10.75□□□□□ -0.69
CLIP1-205ENST00000514271 SCAPERQ9BY12 1400 aa10.75□□□□□ -0.69
CLIP1-205ENST00000514271 CFDP1Q9UEE9 299 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-205ENST00000514271 AGLP35573 1532 aa10.75□□□□□ -0.69
CLIP1-205ENST00000514271 KLHL34Q8N239 644 aa10.75□□□□□ -0.69
CLIP1-205ENST00000514271 RAB3GAP2Q9H2M9 1393 aa10.74□□□□□ -0.69
CLIP1-205ENST00000514271 EIF2AK4Q9P2K8 1649 aaKnown RBP10.74□□□□□ -0.69
CLIP1-205ENST00000514271 TULP1O00294 542 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-205ENST00000514271 SYCP2Q9BX26 1530 aa10.74□□□□□ -0.69
CLIP1-205ENST00000514271 ARID3CA6NKF2 412 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms