RNA–Protein interactions for RNA: ENST00000513841.1

ARHGEF28-213, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 3

Gene ARHGEF28, Length 710 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-213ENST00000513841 MTUS2Q5JR59 1369 aa18.37■□□□□ 0.53
ARHGEF28-213ENST00000513841 ARHGAP5Q13017 1502 aa18.36■□□□□ 0.53
ARHGEF28-213ENST00000513841 CFDP1Q9UEE9 299 aaPredicted RBP18.34■□□□□ 0.53
ARHGEF28-213ENST00000513841 MYO5CQ9NQX4 1742 aa18.33■□□□□ 0.52
ARHGEF28-213ENST00000513841 FRMPD1Q5SYB0 1578 aa18.32■□□□□ 0.52
ARHGEF28-213ENST00000513841 MAGI2Q86UL8 1455 aa18.32■□□□□ 0.52
ARHGEF28-213ENST00000513841 POGZQ7Z3K3 1410 aa18.32■□□□□ 0.52
ARHGEF28-213ENST00000513841 CCNB3Q8WWL7 1395 aa18.3■□□□□ 0.52
ARHGEF28-213ENST00000513841 RICTORQ6R327 1708 aa18.3■□□□□ 0.52
ARHGEF28-213ENST00000513841 HNRNPMP52272 730 aaKnown RBP eCLIP18.3■□□□□ 0.524e-7■■■□□ 16.1
ARHGEF28-213ENST00000513841 YEATS2Q9ULM3 1422 aa18.3■□□□□ 0.52
ARHGEF28-213ENST00000513841 MLECQ14165 292 aa18.29■□□□□ 0.52
ARHGEF28-213ENST00000513841 GPATCH8Q9UKJ3 1502 aaKnown RBP18.28■□□□□ 0.52
ARHGEF28-213ENST00000513841 CDC42BPBQ9Y5S2 1711 aa18.26■□□□□ 0.51
ARHGEF28-213ENST00000513841 ZNF518AQ6AHZ1 1483 aa18.26■□□□□ 0.51
ARHGEF28-213ENST00000513841 VPS8Q8N3P4 1428 aa18.25■□□□□ 0.51
ARHGEF28-213ENST00000513841 ZMYM4Q5VZL5 1548 aa18.25■□□□□ 0.51
ARHGEF28-213ENST00000513841 ZFYVE16Q7Z3T8 1539 aa18.25■□□□□ 0.51
ARHGEF28-213ENST00000513841 ATP10AO60312 1499 aa18.25■□□□□ 0.51
ARHGEF28-213ENST00000513841 TRAPPC8Q9Y2L5 1435 aa18.24■□□□□ 0.51
ARHGEF28-213ENST00000513841 APLP2Q06481 763 aa18.24■□□□□ 0.51
ARHGEF28-213ENST00000513841 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
ARHGEF28-213ENST00000513841 ZNF644Q9H582 1327 aaPredicted RBP18.22■□□□□ 0.51
ARHGEF28-213ENST00000513841 PREX2Q70Z35 1606 aa18.21■□□□□ 0.51
ARHGEF28-213ENST00000513841 KANK4Q5T7N3 995 aaPredicted RBP18.21■□□□□ 0.51
ARHGEF28-213ENST00000513841 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
ARHGEF28-213ENST00000513841 ARHGEF40Q8TER5 1519 aa18.21■□□□□ 0.51
ARHGEF28-213ENST00000513841 SPAG9O60271 1321 aaKnown RBP18.21■□□□□ 0.51
ARHGEF28-213ENST00000513841 CDC42BPAQ5VT25 1732 aa18.19■□□□□ 0.5
ARHGEF28-213ENST00000513841 MLH3Q9UHC1 1453 aa18.19■□□□□ 0.5
ARHGEF28-213ENST00000513841 C9orf84Q5VXU9 1444 aa18.18■□□□□ 0.5
ARHGEF28-213ENST00000513841 KIAA1107Q9UPP5 1409 aa18.18■□□□□ 0.5
ARHGEF28-213ENST00000513841 PTPRMP28827 1452 aa18.18■□□□□ 0.5
ARHGEF28-213ENST00000513841 PLEKHH2Q8IVE3 1493 aa18.17■□□□□ 0.5
ARHGEF28-213ENST00000513841 ADAMTSL3P82987 1691 aa18.17■□□□□ 0.5
ARHGEF28-213ENST00000513841 EHBP1L1Q8N3D4 1523 aa18.17■□□□□ 0.5
ARHGEF28-213ENST00000513841 ABCC1P33527 1531 aa18.16■□□□□ 0.5
ARHGEF28-213ENST00000513841 BCORL1Q5H9F3 1711 aa18.15■□□□□ 0.5
ARHGEF28-213ENST00000513841 RSPH4AQ5TD94 716 aa18.15■□□□□ 0.5
ARHGEF28-213ENST00000513841 KDM5CP41229 1560 aa18.15■□□□□ 0.5
ARHGEF28-213ENST00000513841 NCOA2Q15596 1464 aa18.14■□□□□ 0.5
ARHGEF28-213ENST00000513841 ESF1Q9H501 851 aaKnown RBP18.14■□□□□ 0.49
ARHGEF28-213ENST00000513841 LRRC9Q6ZRR7 1453 aa18.14■□□□□ 0.49
ARHGEF28-213ENST00000513841 TIAM1Q13009 1591 aa18.13■□□□□ 0.49
ARHGEF28-213ENST00000513841 SAMD9LQ8IVG5 1584 aa18.13■□□□□ 0.49
ARHGEF28-213ENST00000513841 HECW2Q9P2P5 1572 aa18.1■□□□□ 0.49
ARHGEF28-213ENST00000513841 SYCP2Q9BX26 1530 aa18.1■□□□□ 0.49
ARHGEF28-213ENST00000513841 CEBPAP49715 358 aaPredicted RBP18.1■□□□□ 0.49
ARHGEF28-213ENST00000513841 ITSN2Q9NZM3 1697 aa18.09■□□□□ 0.49
ARHGEF28-213ENST00000513841 MADDQ8WXG6 1647 aa18.09■□□□□ 0.49
ARHGEF28-213ENST00000513841 MAP3K1Q13233 1512 aa18.09■□□□□ 0.49
ARHGEF28-213ENST00000513841 TSPY4P0CV99 314 aa18.09■□□□□ 0.49
ARHGEF28-213ENST00000513841 TSPY10P0CW01 314 aa18.09■□□□□ 0.49
ARHGEF28-213ENST00000513841 MBD5Q9P267 1494 aa18.07■□□□□ 0.48
ARHGEF28-213ENST00000513841 SUPT6HQ7KZ85 1726 aaKnown RBP18.07■□□□□ 0.48
ARHGEF28-213ENST00000513841 SIGLEC1Q9BZZ2 1709 aa18.07■□□□□ 0.48
ARHGEF28-213ENST00000513841 DIP2CQ9Y2E4 1556 aa18.07■□□□□ 0.48
ARHGEF28-213ENST00000513841 GGT6Q6P531 493 aa18.05■□□□□ 0.48
ARHGEF28-213ENST00000513841 KIDINS220Q9ULH0 1771 aa18.04■□□□□ 0.48
ARHGEF28-213ENST00000513841 RIMS1Q86UR5 1692 aaKnown RBP18.04■□□□□ 0.48
ARHGEF28-213ENST00000513841 AGLP35573 1532 aa18.03■□□□□ 0.48
ARHGEF28-213ENST00000513841 ABCA6Q8N139 1617 aa18.02■□□□□ 0.48
ARHGEF28-213ENST00000513841 RTEL1-TNFRSF6BF6WH68 1400 aa18.02■□□□□ 0.48
ARHGEF28-213ENST00000513841 REREQ9P2R6 1566 aa18.02■□□□□ 0.48
ARHGEF28-213ENST00000513841 ATP7AQ04656 1500 aa18■□□□□ 0.47
ARHGEF28-213ENST00000513841 A2MP01023 1474 aa18■□□□□ 0.47
ARHGEF28-213ENST00000513841 CAMSAP2Q08AD1 1489 aa18■□□□□ 0.47
ARHGEF28-213ENST00000513841 HSPA2P54652 639 aa17.99■□□□□ 0.47
ARHGEF28-213ENST00000513841 PPP6R1Q9UPN7 881 aa17.99■□□□□ 0.47
ARHGEF28-213ENST00000513841 DHX29Q7Z478 1369 aaKnown RBP17.99■□□□□ 0.47
ARHGEF28-213ENST00000513841 MIA2Q96PC5 1412 aa17.98■□□□□ 0.47
ARHGEF28-213ENST00000513841 KIF3BO15066 747 aa17.98■□□□□ 0.47
ARHGEF28-213ENST00000513841 MYOM3Q5VTT5 1437 aa17.98■□□□□ 0.47
ARHGEF28-213ENST00000513841 CCDC141Q6ZP82 1450 aa17.97■□□□□ 0.47
ARHGEF28-213ENST00000513841 FER1L4A9Z1Z3 1794 aa17.96■□□□□ 0.47
ARHGEF28-213ENST00000513841 ZMYM3Q14202 1370 aa17.95■□□□□ 0.46
ARHGEF28-213ENST00000513841 CNTLNQ9NXG0 1405 aa17.94■□□□□ 0.46
ARHGEF28-213ENST00000513841 INO80Q9ULG1 1556 aaPredicted RBP17.93■□□□□ 0.46
ARHGEF28-213ENST00000513841 LMTK3Q96Q04 1460 aa17.93■□□□□ 0.46
ARHGEF28-213ENST00000513841 ARHGEF5Q12774 1597 aa17.9■□□□□ 0.46
ARHGEF28-213ENST00000513841 SETD1BQ9UPS6 1966 aaKnown RBP17.89■□□□□ 0.45
ARHGEF28-213ENST00000513841 WASHC2CQ9Y4E1 1318 aa17.89■□□□□ 0.45
ARHGEF28-213ENST00000513841 FAM50AQ14320 339 aaKnown RBP17.88■□□□□ 0.45
ARHGEF28-213ENST00000513841 RRP7BPQ9NSQ0 103 aa17.88■□□□□ 0.45
ARHGEF28-213ENST00000513841 PPARGC1BQ86YN6 1023 aaKnown RBP17.87■□□□□ 0.45
ARHGEF28-213ENST00000513841 ADGBQ8N7X0 1667 aa17.87■□□□□ 0.45
ARHGEF28-213ENST00000513841 CHIC2Q9UKJ5 165 aa17.86■□□□□ 0.45
ARHGEF28-213ENST00000513841 PLXNC1O60486 1568 aa17.86■□□□□ 0.45
ARHGEF28-213ENST00000513841 UHRF1BP1Q6BDS2 1440 aa17.85■□□□□ 0.45
ARHGEF28-213ENST00000513841 FGD6Q6ZV73 1430 aa17.85■□□□□ 0.45
ARHGEF28-213ENST00000513841 ABCC5O15440 1437 aa17.84■□□□□ 0.45
ARHGEF28-213ENST00000513841 DMRT2Q9Y5R5 561 aa17.83■□□□□ 0.44
ARHGEF28-213ENST00000513841 C3P01024 1663 aa17.81■□□□□ 0.44
ARHGEF28-213ENST00000513841 FBXO31Q5XUX0 539 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF28-213ENST00000513841 NPATQ14207 1427 aa17.81■□□□□ 0.44
ARHGEF28-213ENST00000513841 PTPN23Q9H3S7 1636 aa17.8■□□□□ 0.44
ARHGEF28-213ENST00000513841 DAPK1P53355 1430 aa17.79■□□□□ 0.44
ARHGEF28-213ENST00000513841 TCOF1Q13428 1488 aaKnown RBP17.78■□□□□ 0.44
ARHGEF28-213ENST00000513841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.78■□□□□ 0.441e-6■■□□□ 12.2
ARHGEF28-213ENST00000513841 PTPRKQ15262 1439 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms