RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 NCOA2Q15596 1464 aa15.39■□□□□ 0.05
TOPBP1-209ENST00000513818 CDC42BPBQ9Y5S2 1711 aa15.38■□□□□ 0.05
TOPBP1-209ENST00000513818 PPARGC1BQ86YN6 1023 aaKnown RBP15.37■□□□□ 0.05
TOPBP1-209ENST00000513818 TEX14Q8IWB6 1497 aa15.37■□□□□ 0.05
TOPBP1-209ENST00000513818 ARHGAP5Q13017 1502 aa15.37■□□□□ 0.05
TOPBP1-209ENST00000513818 KDM6BO15054 1643 aa15.35■□□□□ 0.05
TOPBP1-209ENST00000513818 PLCH2O75038 1416 aa15.34■□□□□ 0.05
TOPBP1-209ENST00000513818 FANCAO15360 1455 aa15.34■□□□□ 0.05
TOPBP1-209ENST00000513818 GPATCH8Q9UKJ3 1502 aaKnown RBP15.34■□□□□ 0.05
TOPBP1-209ENST00000513818 ITSN2Q9NZM3 1697 aa15.34■□□□□ 0.05
TOPBP1-209ENST00000513818 CFAP74Q9C0B2 1584 aa15.33■□□□□ 0.05
TOPBP1-209ENST00000513818 CCNB3Q8WWL7 1395 aa15.33■□□□□ 0.04
TOPBP1-209ENST00000513818 COL17A1Q9UMD9 1497 aaPredicted RBP15.32■□□□□ 0.04
TOPBP1-209ENST00000513818 ARAP3Q8WWN8 1544 aa15.32■□□□□ 0.04
TOPBP1-209ENST00000513818 NEO1Q92859 1461 aa15.31■□□□□ 0.04
TOPBP1-209ENST00000513818 SAMD9LQ8IVG5 1584 aa15.31■□□□□ 0.04
TOPBP1-209ENST00000513818 AKNAQ7Z591 1439 aa15.29■□□□□ 0.04
TOPBP1-209ENST00000513818 FRMPD1Q5SYB0 1578 aa15.28■□□□□ 0.04
TOPBP1-209ENST00000513818 ADGRL1O94910 1474 aa15.28■□□□□ 0.04
TOPBP1-209ENST00000513818 PHLDB1Q86UU1 1377 aa15.28■□□□□ 0.04
TOPBP1-209ENST00000513818 ABCC1P33527 1531 aa15.27■□□□□ 0.04
TOPBP1-209ENST00000513818 ZNF777Q9ULD5 760 aaPredicted RBP15.27■□□□□ 0.04
TOPBP1-209ENST00000513818 SYCP2Q9BX26 1530 aa15.26■□□□□ 0.03
TOPBP1-209ENST00000513818 EFCAB2Q5VUJ9 269 aa15.25■□□□□ 0.03
TOPBP1-209ENST00000513818 ARHGEF12Q9NZN5 1544 aa15.25■□□□□ 0.03
TOPBP1-209ENST00000513818 RICTORQ6R327 1708 aa15.25■□□□□ 0.03
TOPBP1-209ENST00000513818 MYOM3Q5VTT5 1437 aa15.25■□□□□ 0.03
TOPBP1-209ENST00000513818 ZNF644Q9H582 1327 aaPredicted RBP15.24■□□□□ 0.03
TOPBP1-209ENST00000513818 CFDP1Q9UEE9 299 aaPredicted RBP15.24■□□□□ 0.03
TOPBP1-209ENST00000513818 CAMSAP2Q08AD1 1489 aa15.24■□□□□ 0.03
TOPBP1-209ENST00000513818 SCAPERQ9BY12 1400 aa15.24■□□□□ 0.03
TOPBP1-209ENST00000513818 DENND4BO75064 1496 aaPredicted RBP15.22■□□□□ 0.03
TOPBP1-209ENST00000513818 RAPGEF3O95398 923 aa15.22■□□□□ 0.03
TOPBP1-209ENST00000513818 POGZQ7Z3K3 1410 aa15.21■□□□□ 0.03
TOPBP1-209ENST00000513818 PTPN23Q9H3S7 1636 aa15.21■□□□□ 0.02
TOPBP1-209ENST00000513818 TRAPPC8Q9Y2L5 1435 aa15.2■□□□□ 0.02
TOPBP1-209ENST00000513818 FGD6Q6ZV73 1430 aa15.19■□□□□ 0.02
TOPBP1-209ENST00000513818 HNRNPMP52272 730 aaKnown RBP eCLIP15.17■□□□□ 0.02
TOPBP1-209ENST00000513818 ZMYM4Q5VZL5 1548 aa15.17■□□□□ 0.02
TOPBP1-209ENST00000513818 MIA2Q96PC5 1412 aa15.17■□□□□ 0.02
TOPBP1-209ENST00000513818 KDM5CP41229 1560 aa15.16■□□□□ 0.02
TOPBP1-209ENST00000513818 PLEKHH2Q8IVE3 1493 aa15.16■□□□□ 0.02
TOPBP1-209ENST00000513818 ZNF518AQ6AHZ1 1483 aa15.15■□□□□ 0.02
TOPBP1-209ENST00000513818 AFAP1Q8N556 730 aa15.15■□□□□ 0.02
TOPBP1-209ENST00000513818 HECW2Q9P2P5 1572 aa15.15■□□□□ 0.02
TOPBP1-209ENST00000513818 MBD5Q9P267 1494 aa15.14■□□□□ 0.01
TOPBP1-209ENST00000513818 ARHGEF40Q8TER5 1519 aa15.14■□□□□ 0.01
TOPBP1-209ENST00000513818 POTEDQ86YR6 584 aa15.14■□□□□ 0.01
TOPBP1-209ENST00000513818 KIAA1107Q9UPP5 1409 aa15.14■□□□□ 0.01
TOPBP1-209ENST00000513818 TCOF1Q13428 1488 aaKnown RBP15.14■□□□□ 0.01
TOPBP1-209ENST00000513818 YEATS2Q9ULM3 1422 aa15.13■□□□□ 0.01
TOPBP1-209ENST00000513818 ABCA6Q8N139 1617 aa15.13■□□□□ 0.01
TOPBP1-209ENST00000513818 CCDC141Q6ZP82 1450 aa15.13■□□□□ 0.01
TOPBP1-209ENST00000513818 ZFYVE16Q7Z3T8 1539 aa15.12■□□□□ 0.01
TOPBP1-209ENST00000513818 ARHGEF5Q12774 1597 aa15.12■□□□□ 0.01
TOPBP1-209ENST00000513818 CROCC2H7BZ55 1655 aa15.12■□□□□ 0.01
TOPBP1-209ENST00000513818 INO80Q9ULG1 1556 aaPredicted RBP15.11■□□□□ 0.01
TOPBP1-209ENST00000513818 KIDINS220Q9ULH0 1771 aa15.11■□□□□ 0.01
TOPBP1-209ENST00000513818 FAM50AQ14320 339 aaKnown RBP15.11■□□□□ 0.01
TOPBP1-209ENST00000513818 ATP7AQ04656 1500 aa15.1■□□□□ 0.01
TOPBP1-209ENST00000513818 DIP2CQ9Y2E4 1556 aa15.1■□□□□ 0.01
TOPBP1-209ENST00000513818 DNMT1P26358 1616 aaKnown RBP15.1■□□□□ 0.01
TOPBP1-209ENST00000513818 SIGLEC1Q9BZZ2 1709 aa15.09■□□□□ 0.01
TOPBP1-209ENST00000513818 MYT1LQ9UL68 1186 aa15.09■□□□□ 0.01
TOPBP1-209ENST00000513818 ABCC5O15440 1437 aa15.07■□□□□ 0
TOPBP1-209ENST00000513818 DAPK1P53355 1430 aa15.07■□□□□ 0
TOPBP1-209ENST00000513818 MLH3Q9UHC1 1453 aa15.07■□□□□ 0
TOPBP1-209ENST00000513818 SPAG9O60271 1321 aaKnown RBP15.06■□□□□ 0
TOPBP1-209ENST00000513818 RRBP1Q9P2E9 1410 aaKnown RBP15.06■□□□□ 0
TOPBP1-209ENST00000513818 C9orf84Q5VXU9 1444 aa15.05■□□□□ -0
TOPBP1-209ENST00000513818 MAGI2Q86UL8 1455 aa15.05■□□□□ -0
TOPBP1-209ENST00000513818 ADGBQ8N7X0 1667 aa15.05■□□□□ -0
TOPBP1-209ENST00000513818 MAST1Q9Y2H9 1570 aa15.04■□□□□ -0
TOPBP1-209ENST00000513818 ITGAEP38570 1179 aa15.03■□□□□ -0
TOPBP1-209ENST00000513818 SHANK2Q9UPX8 1470 aa15.02■□□□□ -0
TOPBP1-209ENST00000513818 SLC24A1O60721 1099 aa15.02■□□□□ -0
TOPBP1-209ENST00000513818 PTPRKQ15262 1439 aa15.01□□□□□ -0.01
TOPBP1-209ENST00000513818 PLXNC1O60486 1568 aa15□□□□□ -0.01
TOPBP1-209ENST00000513818 CHIC2Q9UKJ5 165 aa15□□□□□ -0.01
TOPBP1-209ENST00000513818 ATP10AO60312 1499 aa15□□□□□ -0.01
TOPBP1-209ENST00000513818 RTEL1-TNFRSF6BF6WH68 1400 aa14.99□□□□□ -0.01
TOPBP1-209ENST00000513818 TSPY4P0CV99 314 aa14.98□□□□□ -0.01
TOPBP1-209ENST00000513818 TSPY10P0CW01 314 aa14.98□□□□□ -0.01
TOPBP1-209ENST00000513818 REREQ9P2R6 1566 aa14.98□□□□□ -0.01
TOPBP1-209ENST00000513818 A2MP01023 1474 aa14.97□□□□□ -0.01
TOPBP1-209ENST00000513818 RSPH4AQ5TD94 716 aa14.97□□□□□ -0.01
TOPBP1-209ENST00000513818 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.97□□□□□ -0.01
TOPBP1-209ENST00000513818 ARID4BQ4LE39 1312 aaPredicted RBP14.96□□□□□ -0.01
TOPBP1-209ENST00000513818 KIF15Q9NS87 1388 aa14.95□□□□□ -0.02
TOPBP1-209ENST00000513818 ADGRL2O95490 1459 aa14.95□□□□□ -0.02
TOPBP1-209ENST00000513818 BCORL1Q5H9F3 1711 aa14.95□□□□□ -0.02
TOPBP1-209ENST00000513818 RRP7BPQ9NSQ0 103 aa14.94□□□□□ -0.02
TOPBP1-209ENST00000513818 MLECQ14165 292 aa14.93□□□□□ -0.02
TOPBP1-209ENST00000513818 MADDQ8WXG6 1647 aa14.92□□□□□ -0.02
TOPBP1-209ENST00000513818 AGLP35573 1532 aa14.92□□□□□ -0.02
TOPBP1-209ENST00000513818 DUOX2Q9NRD8 1548 aa14.92□□□□□ -0.02
TOPBP1-209ENST00000513818 NCOA1Q15788 1441 aa14.92□□□□□ -0.02
TOPBP1-209ENST00000513818 ANKRD30AQ9BXX3 1397 aa14.91□□□□□ -0.02
TOPBP1-209ENST00000513818 MAPK8IP2Q13387 824 aaPredicted RBP14.9□□□□□ -0.02
TOPBP1-209ENST00000513818 ADAMTSL3P82987 1691 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms