RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 KANK4Q5T7N3 995 aaPredicted RBP15.06■□□□□ 0
TPM3-221ENST00000513769 ATP1B4Q9UN42 357 aaPredicted RBP15.05■□□□□ -0
TPM3-221ENST00000513769 EVX2Q03828 476 aa15.04■□□□□ -0
TPM3-221ENST00000513769 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
TPM3-221ENST00000513769 CDK11AQ9UQ88 783 aaPredicted RBP15.03■□□□□ -0
TPM3-221ENST00000513769 KIAA0556O60303 1618 aa15.02□□□□□ -0.01
TPM3-221ENST00000513769 LRRC9Q6ZRR7 1453 aa15.01□□□□□ -0.01
TPM3-221ENST00000513769 TIAM1Q13009 1591 aa15.01□□□□□ -0.01
TPM3-221ENST00000513769 CCDC18Q5T9S5 1454 aa15□□□□□ -0.01
TPM3-221ENST00000513769 PRG4Q92954 1404 aaPredicted RBP15□□□□□ -0.01
TPM3-221ENST00000513769 C19orf67A6NJJ6 358 aa14.98□□□□□ -0.01
TPM3-221ENST00000513769 PTPRGP23470 1445 aa14.97□□□□□ -0.01
TPM3-221ENST00000513769 SHROOM2Q13796 1616 aa14.95□□□□□ -0.02
TPM3-221ENST00000513769 PCF11O94913 1555 aaKnown RBP14.95□□□□□ -0.02
TPM3-221ENST00000513769 MTUS2Q5JR59 1369 aa14.94□□□□□ -0.02
TPM3-221ENST00000513769 EPRSP07814 1512 aaKnown RBP14.93□□□□□ -0.02
TPM3-221ENST00000513769 HECW1Q76N89 1606 aa14.93□□□□□ -0.02
TPM3-221ENST00000513769 FARP1Q9Y4F1 1045 aaPredicted RBP14.93□□□□□ -0.02
TPM3-221ENST00000513769 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.93□□□□□ -0.02
TPM3-221ENST00000513769 ERCC6L2Q5T890 1561 aa14.93□□□□□ -0.02
TPM3-221ENST00000513769 RRBP1Q9P2E9 1410 aaKnown RBP14.92□□□□□ -0.02
TPM3-221ENST00000513769 TTBK1Q5TCY1 1321 aaPredicted RBP14.92□□□□□ -0.02
TPM3-221ENST00000513769 CFAP43Q8NDM7 1665 aa14.9□□□□□ -0.02
TPM3-221ENST00000513769 PLEKHD1A6NEE1 506 aa14.9□□□□□ -0.02
TPM3-221ENST00000513769 RAPGEF6Q8TEU7 1601 aa14.89□□□□□ -0.03
TPM3-221ENST00000513769 CREBZFQ9NS37 354 aa14.89□□□□□ -0.03
TPM3-221ENST00000513769 CCNB3Q8WWL7 1395 aa14.87□□□□□ -0.03
TPM3-221ENST00000513769 PROM2Q8N271 834 aa14.87□□□□□ -0.03
TPM3-221ENST00000513769 NUP153P49790 1475 aaKnown RBP14.87□□□□□ -0.03
TPM3-221ENST00000513769 UACAQ9BZF9 1416 aa14.86□□□□□ -0.03
TPM3-221ENST00000513769 ABCA8O94911 1581 aa14.85□□□□□ -0.03
TPM3-221ENST00000513769 ZEB1P37275 1124 aaPredicted RBP14.85□□□□□ -0.03
TPM3-221ENST00000513769 PLB1Q6P1J6 1458 aa14.84□□□□□ -0.03
TPM3-221ENST00000513769 EHBP1L1Q8N3D4 1523 aa14.84□□□□□ -0.03
TPM3-221ENST00000513769 NPM1P06748 294 aaKnown RBP eCLIP14.83□□□□□ -0.04
TPM3-221ENST00000513769 HRCP23327 699 aa14.83□□□□□ -0.04
TPM3-221ENST00000513769 PHLDB1Q86UU1 1377 aa14.82□□□□□ -0.04
TPM3-221ENST00000513769 UHRF1BP1LA0JNW5 1464 aa14.82□□□□□ -0.04
TPM3-221ENST00000513769 ATP10BO94823 1461 aa14.82□□□□□ -0.04
TPM3-221ENST00000513769 MIA2Q96PC5 1412 aa14.81□□□□□ -0.04
TPM3-221ENST00000513769 LRRIQ1Q96JM4 1722 aa14.8□□□□□ -0.04
TPM3-221ENST00000513769 CD44P16070 742 aaKnown RBP14.8□□□□□ -0.04
TPM3-221ENST00000513769 FAM69CQ0P6D2 419 aa14.8□□□□□ -0.04
TPM3-221ENST00000513769 SUPT6HQ7KZ85 1726 aaKnown RBP14.8□□□□□ -0.04
TPM3-221ENST00000513769 TROQ12816 1431 aaPredicted RBP14.79□□□□□ -0.04
TPM3-221ENST00000513769 NCOA2Q15596 1464 aa14.79□□□□□ -0.04
TPM3-221ENST00000513769 MYOM3Q5VTT5 1437 aa14.78□□□□□ -0.04
TPM3-221ENST00000513769 ACIN1Q9UKV3 1341 aaKnown RBP14.78□□□□□ -0.04
TPM3-221ENST00000513769 CDK13Q14004 1512 aaKnown RBP14.76□□□□□ -0.05
TPM3-221ENST00000513769 FGD6Q6ZV73 1430 aa14.75□□□□□ -0.05
TPM3-221ENST00000513769 KIF13AQ9H1H9 1805 aa14.75□□□□□ -0.05
TPM3-221ENST00000513769 FAM50AQ14320 339 aaKnown RBP14.74□□□□□ -0.05
TPM3-221ENST00000513769 MAGI3Q5TCQ9 1506 aa14.74□□□□□ -0.05
TPM3-221ENST00000513769 ABCC2Q92887 1545 aa14.74□□□□□ -0.05
TPM3-221ENST00000513769 GABBR2O75899 941 aa14.72□□□□□ -0.05
TPM3-221ENST00000513769 RSPH4AQ5TD94 716 aa14.72□□□□□ -0.05
TPM3-221ENST00000513769 KDM5BQ9UGL1 1544 aa14.71□□□□□ -0.05
TPM3-221ENST00000513769 ABCC10Q5T3U5 1492 aa14.71□□□□□ -0.05
TPM3-221ENST00000513769 ARID3CA6NKF2 412 aa14.71□□□□□ -0.05
TPM3-221ENST00000513769 CFDP1Q9UEE9 299 aaPredicted RBP14.7□□□□□ -0.06
TPM3-221ENST00000513769 TCOF1Q13428 1488 aaKnown RBP14.69□□□□□ -0.06
TPM3-221ENST00000513769 FKBP8Q14318 412 aa14.69□□□□□ -0.06
TPM3-221ENST00000513769 CLSPNQ9HAW4 1339 aa14.68□□□□□ -0.06
TPM3-221ENST00000513769 CCER1Q8TC90 406 aaPredicted RBP14.68□□□□□ -0.06
TPM3-221ENST00000513769 ADCY10Q96PN6 1610 aa14.67□□□□□ -0.06
TPM3-221ENST00000513769 MAPKBP1O60336 1514 aa14.66□□□□□ -0.06
TPM3-221ENST00000513769 GPATCH8Q9UKJ3 1502 aaKnown RBP14.66□□□□□ -0.06
TPM3-221ENST00000513769 MNX1P50219 401 aaPredicted RBP14.65□□□□□ -0.06
TPM3-221ENST00000513769 SETD5Q9C0A6 1442 aa14.65□□□□□ -0.06
TPM3-221ENST00000513769 ITGAEP38570 1179 aa14.64□□□□□ -0.07
TPM3-221ENST00000513769 PTPN23Q9H3S7 1636 aa14.63□□□□□ -0.07
TPM3-221ENST00000513769 DIP2BQ9P265 1576 aa14.62□□□□□ -0.07
TPM3-221ENST00000513769 ZRANB1Q9UGI0 708 aa14.62□□□□□ -0.07
TPM3-221ENST00000513769 KDM4FA0A1W2PPD8 638 aa14.61□□□□□ -0.07
TPM3-221ENST00000513769 KIF14Q15058 1648 aa14.61□□□□□ -0.07
TPM3-221ENST00000513769 KDM6BO15054 1643 aa14.59□□□□□ -0.07
TPM3-221ENST00000513769 KCNH8Q96L42 1107 aa14.59□□□□□ -0.07
TPM3-221ENST00000513769 ROCK1Q13464 1354 aa14.59□□□□□ -0.07
TPM3-221ENST00000513769 ITSN2Q9NZM3 1697 aa14.58□□□□□ -0.07
TPM3-221ENST00000513769 TSPY4P0CV99 314 aa14.58□□□□□ -0.08
TPM3-221ENST00000513769 TSPY10P0CW01 314 aa14.58□□□□□ -0.08
TPM3-221ENST00000513769 EFCAB2Q5VUJ9 269 aa14.58□□□□□ -0.08
TPM3-221ENST00000513769 ZNF579Q8NAF0 562 aaKnown RBP14.57□□□□□ -0.08
TPM3-221ENST00000513769 AKNAQ7Z591 1439 aa14.57□□□□□ -0.08
TPM3-221ENST00000513769 TSPOAP1O95153 1857 aa14.57□□□□□ -0.08
TPM3-221ENST00000513769 ZCCHC11Q5TAX3 1644 aaKnown RBP14.56□□□□□ -0.08
TPM3-221ENST00000513769 HFM1A2PYH4 1435 aa14.56□□□□□ -0.08
TPM3-221ENST00000513769 PLCH2O75038 1416 aa14.56□□□□□ -0.08
TPM3-221ENST00000513769 PAK3O75914 559 aaPredicted RBP14.54□□□□□ -0.08
TPM3-221ENST00000513769 ZNF644Q9H582 1327 aaPredicted RBP14.54□□□□□ -0.08
TPM3-221ENST00000513769 RAB3GAP2Q9H2M9 1393 aa14.54□□□□□ -0.08
TPM3-221ENST00000513769 PTPRKQ15262 1439 aa14.54□□□□□ -0.08
TPM3-221ENST00000513769 KIAA1107Q9UPP5 1409 aa14.54□□□□□ -0.08
TPM3-221ENST00000513769 PLEKHH2Q8IVE3 1493 aa14.53□□□□□ -0.08
TPM3-221ENST00000513769 ABCC5O15440 1437 aa14.53□□□□□ -0.08
TPM3-221ENST00000513769 ZNF777Q9ULD5 760 aaPredicted RBP14.53□□□□□ -0.08
TPM3-221ENST00000513769 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.52□□□□□ -0.08
TPM3-221ENST00000513769 ARAP3Q8WWN8 1544 aa14.52□□□□□ -0.08
TPM3-221ENST00000513769 WDR7Q9Y4E6 1490 aa14.52□□□□□ -0.08
TPM3-221ENST00000513769 DAPK1P53355 1430 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms