RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 PHLDB1Q86UU1 1377 aa16.22■□□□□ 0.19
CCL28-203ENST00000513525 ADGRL1O94910 1474 aa16.22■□□□□ 0.19
CCL28-203ENST00000513525 ARHGAP35Q9NRY4 1499 aa16.22■□□□□ 0.19
CCL28-203ENST00000513525 UBTFP17480 764 aaKnown RBP16.21■□□□□ 0.19
CCL28-203ENST00000513525 NEO1Q92859 1461 aa16.21■□□□□ 0.19
CCL28-203ENST00000513525 CFAP74Q9C0B2 1584 aa16.2■□□□□ 0.18
CCL28-203ENST00000513525 LRRIQ1Q96JM4 1722 aa16.2■□□□□ 0.18
CCL28-203ENST00000513525 FMN1Q68DA7 1419 aa16.2■□□□□ 0.18
CCL28-203ENST00000513525 CDK13Q14004 1512 aaKnown RBP16.18■□□□□ 0.18
CCL28-203ENST00000513525 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.18■□□□□ 0.18
CCL28-203ENST00000513525 TTC37Q6PGP7 1564 aa16.18■□□□□ 0.18
CCL28-203ENST00000513525 RICTORQ6R327 1708 aa16.17■□□□□ 0.18
CCL28-203ENST00000513525 FRMPD1Q5SYB0 1578 aa16.16■□□□□ 0.18
CCL28-203ENST00000513525 PLEKHD1A6NEE1 506 aa16.16■□□□□ 0.18
CCL28-203ENST00000513525 MYO5CQ9NQX4 1742 aa16.14■□□□□ 0.17
CCL28-203ENST00000513525 EHMT2Q96KQ7 1210 aa16.14■□□□□ 0.17
CCL28-203ENST00000513525 FANCAO15360 1455 aa16.1■□□□□ 0.17
CCL28-203ENST00000513525 KIF14Q15058 1648 aa16.09■□□□□ 0.17
CCL28-203ENST00000513525 PCF11O94913 1555 aaKnown RBP16.08■□□□□ 0.16
CCL28-203ENST00000513525 AKNAQ7Z591 1439 aa16.08■□□□□ 0.16
CCL28-203ENST00000513525 ZMYM4Q5VZL5 1548 aa16.07■□□□□ 0.16
CCL28-203ENST00000513525 ARHGEF40Q8TER5 1519 aa16.07■□□□□ 0.16
CCL28-203ENST00000513525 ADAMTSL3P82987 1691 aa16.06■□□□□ 0.16
CCL28-203ENST00000513525 DENND4BO75064 1496 aaPredicted RBP16.06■□□□□ 0.16
CCL28-203ENST00000513525 BCORL1Q5H9F3 1711 aa16.05■□□□□ 0.16
CCL28-203ENST00000513525 RAPGEF3O95398 923 aa16.05■□□□□ 0.16
CCL28-203ENST00000513525 PLCH2O75038 1416 aa16.05■□□□□ 0.16
CCL28-203ENST00000513525 TROQ12816 1431 aaPredicted RBP16.04■□□□□ 0.16
CCL28-203ENST00000513525 CASKIN1Q8WXD9 1431 aa16.04■□□□□ 0.16
CCL28-203ENST00000513525 CCDC18Q5T9S5 1454 aa16.04■□□□□ 0.16
CCL28-203ENST00000513525 CHRDL2Q6WN34 429 aa16.04■□□□□ 0.16
CCL28-203ENST00000513525 CDC42BPBQ9Y5S2 1711 aa16.03■□□□□ 0.16
CCL28-203ENST00000513525 CDK11AQ9UQ88 783 aaPredicted RBP16.03■□□□□ 0.16
CCL28-203ENST00000513525 ATP1B4Q9UN42 357 aaPredicted RBP16.02■□□□□ 0.15
CCL28-203ENST00000513525 CLIP1P30622 1438 aa16.01■□□□□ 0.15
CCL28-203ENST00000513525 FYCO1Q9BQS8 1478 aa16.01■□□□□ 0.15
CCL28-203ENST00000513525 PREX2Q70Z35 1606 aa16■□□□□ 0.15
CCL28-203ENST00000513525 CDC42BPAQ5VT25 1732 aa15.99■□□□□ 0.15
CCL28-203ENST00000513525 SIGLEC1Q9BZZ2 1709 aa15.99■□□□□ 0.15
CCL28-203ENST00000513525 HECW2Q9P2P5 1572 aa15.99■□□□□ 0.15
CCL28-203ENST00000513525 MAGI2Q86UL8 1455 aa15.99■□□□□ 0.15
CCL28-203ENST00000513525 MYCNP04198 464 aaPredicted RBP15.99■□□□□ 0.15
CCL28-203ENST00000513525 ZFYVE16Q7Z3T8 1539 aa15.98■□□□□ 0.15
CCL28-203ENST00000513525 MADDQ8WXG6 1647 aa15.97■□□□□ 0.15
CCL28-203ENST00000513525 POGZQ7Z3K3 1410 aa15.97■□□□□ 0.15
CCL28-203ENST00000513525 POLA2Q14181 598 aa15.96■□□□□ 0.15
CCL28-203ENST00000513525 ARHGAP5Q13017 1502 aa15.96■□□□□ 0.15
CCL28-203ENST00000513525 SCAPERQ9BY12 1400 aa15.96■□□□□ 0.14
CCL28-203ENST00000513525 KDM5CP41229 1560 aa15.94■□□□□ 0.14
CCL28-203ENST00000513525 RIMS1Q86UR5 1692 aaKnown RBP15.94■□□□□ 0.14
CCL28-203ENST00000513525 ITSN2Q9NZM3 1697 aa15.94■□□□□ 0.14
CCL28-203ENST00000513525 EFCAB2Q5VUJ9 269 aa15.94■□□□□ 0.14
CCL28-203ENST00000513525 PTPRMP28827 1452 aa15.93■□□□□ 0.14
CCL28-203ENST00000513525 YEATS2Q9ULM3 1422 aa15.93■□□□□ 0.14
CCL28-203ENST00000513525 FER1L4A9Z1Z3 1794 aa15.91■□□□□ 0.14
CCL28-203ENST00000513525 ZNF518AQ6AHZ1 1483 aa15.91■□□□□ 0.14
CCL28-203ENST00000513525 ABCC1P33527 1531 aa15.9■□□□□ 0.14
CCL28-203ENST00000513525 ARID4BQ4LE39 1312 aaPredicted RBP15.88■□□□□ 0.13
CCL28-203ENST00000513525 REREQ9P2R6 1566 aa15.86■□□□□ 0.13
CCL28-203ENST00000513525 ATP10AO60312 1499 aa15.86■□□□□ 0.13
CCL28-203ENST00000513525 C9orf84Q5VXU9 1444 aa15.86■□□□□ 0.13
CCL28-203ENST00000513525 DIP2CQ9Y2E4 1556 aa15.86■□□□□ 0.13
CCL28-203ENST00000513525 ABCA6Q8N139 1617 aa15.85■□□□□ 0.13
CCL28-203ENST00000513525 KIDINS220Q9ULH0 1771 aa15.84■□□□□ 0.13
CCL28-203ENST00000513525 SAMD9LQ8IVG5 1584 aa15.84■□□□□ 0.13
CCL28-203ENST00000513525 CEP162Q5TB80 1403 aa15.84■□□□□ 0.13
CCL28-203ENST00000513525 MLH3Q9UHC1 1453 aa15.83■□□□□ 0.13
CCL28-203ENST00000513525 ARHGEF12Q9NZN5 1544 aa15.83■□□□□ 0.13
CCL28-203ENST00000513525 EHBP1L1Q8N3D4 1523 aa15.81■□□□□ 0.12
CCL28-203ENST00000513525 GPATCH8Q9UKJ3 1502 aaKnown RBP15.81■□□□□ 0.12
CCL28-203ENST00000513525 TRAPPC8Q9Y2L5 1435 aa15.8■□□□□ 0.12
CCL28-203ENST00000513525 AFAP1Q8N556 730 aa15.79■□□□□ 0.12
CCL28-203ENST00000513525 SYCP2Q9BX26 1530 aa15.78■□□□□ 0.12
CCL28-203ENST00000513525 TIAM1Q13009 1591 aa15.78■□□□□ 0.12
CCL28-203ENST00000513525 LMTK3Q96Q04 1460 aa15.78■□□□□ 0.12
CCL28-203ENST00000513525 AGLP35573 1532 aa15.77■□□□□ 0.12
CCL28-203ENST00000513525 MTUS2Q5JR59 1369 aa15.77■□□□□ 0.11
CCL28-203ENST00000513525 ZBTB12Q9Y330 459 aaPredicted RBP15.77■□□□□ 0.11
CCL28-203ENST00000513525 SETD1BQ9UPS6 1966 aaKnown RBP15.76■□□□□ 0.11
CCL28-203ENST00000513525 AKT1S1Q96B36 256 aa15.76■□□□□ 0.11
CCL28-203ENST00000513525 SUPT6HQ7KZ85 1726 aaKnown RBP15.76■□□□□ 0.11
CCL28-203ENST00000513525 PREX1Q8TCU6 1659 aa15.76■□□□□ 0.11
CCL28-203ENST00000513525 PLEKHH2Q8IVE3 1493 aa15.75■□□□□ 0.11
CCL28-203ENST00000513525 INO80Q9ULG1 1556 aaPredicted RBP15.75■□□□□ 0.11
CCL28-203ENST00000513525 KIAA1107Q9UPP5 1409 aa15.74■□□□□ 0.11
CCL28-203ENST00000513525 CCNB3Q8WWL7 1395 aa15.74■□□□□ 0.11
CCL28-203ENST00000513525 MLECQ14165 292 aa15.73■□□□□ 0.11
CCL28-203ENST00000513525 C3P01024 1663 aa15.73■□□□□ 0.11
CCL28-203ENST00000513525 ATP7AQ04656 1500 aa15.72■□□□□ 0.11
CCL28-203ENST00000513525 ADGBQ8N7X0 1667 aa15.71■□□□□ 0.11
CCL28-203ENST00000513525 MYT1LQ9UL68 1186 aa15.71■□□□□ 0.11
CCL28-203ENST00000513525 MROH2AA6NES4 1674 aa15.7■□□□□ 0.1
CCL28-203ENST00000513525 PLXNC1O60486 1568 aa15.7■□□□□ 0.1
CCL28-203ENST00000513525 SP7Q8TDD2 431 aaPredicted RBP15.69■□□□□ 0.1
CCL28-203ENST00000513525 CFDP1Q9UEE9 299 aaPredicted RBP15.69■□□□□ 0.1
CCL28-203ENST00000513525 ZNF777Q9ULD5 760 aaPredicted RBP15.69■□□□□ 0.1
CCL28-203ENST00000513525 VPS8Q8N3P4 1428 aa15.69■□□□□ 0.1
CCL28-203ENST00000513525 NCOA2Q15596 1464 aa15.66■□□□□ 0.1
CCL28-203ENST00000513525 HNRNPMP52272 730 aaKnown RBP eCLIP15.66■□□□□ 0.1
CCL28-203ENST00000513525 SPAG9O60271 1321 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms