RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 SUPT6HQ7KZ85 1726 aaKnown RBP24.29■■□□□ 1.48
POLR2J3-218ENST00000513506 CFAP74Q9C0B2 1584 aa24.29■■□□□ 1.48
POLR2J3-218ENST00000513506 PREX2Q70Z35 1606 aa24.28■■□□□ 1.48
POLR2J3-218ENST00000513506 CDC42BPAQ5VT25 1732 aa24.25■■□□□ 1.47
POLR2J3-218ENST00000513506 CDC42BPBQ9Y5S2 1711 aa24.24■■□□□ 1.47
POLR2J3-218ENST00000513506 ARHGAP5Q13017 1502 aa24.23■■□□□ 1.47
POLR2J3-218ENST00000513506 KDM6BO15054 1643 aa24.22■■□□□ 1.47
POLR2J3-218ENST00000513506 CFDP1Q9UEE9 299 aaPredicted RBP24.22■■□□□ 1.47
POLR2J3-218ENST00000513506 KIAA1107Q9UPP5 1409 aa24.21■■□□□ 1.47
POLR2J3-218ENST00000513506 MIA2Q96PC5 1412 aa24.2■■□□□ 1.46
POLR2J3-218ENST00000513506 DENND4BO75064 1496 aaPredicted RBP24.19■■□□□ 1.46
POLR2J3-218ENST00000513506 ADGRL1O94910 1474 aa24.19■■□□□ 1.46
POLR2J3-218ENST00000513506 MYOM3Q5VTT5 1437 aa24.18■■□□□ 1.46
POLR2J3-218ENST00000513506 PLEKHH2Q8IVE3 1493 aa24.18■■□□□ 1.46
POLR2J3-218ENST00000513506 SCAPERQ9BY12 1400 aa24.18■■□□□ 1.46
POLR2J3-218ENST00000513506 ITSN2Q9NZM3 1697 aa24.17■■□□□ 1.46
POLR2J3-218ENST00000513506 ABCC1P33527 1531 aa24.15■■□□□ 1.46
POLR2J3-218ENST00000513506 POGZQ7Z3K3 1410 aa24.14■■□□□ 1.45
POLR2J3-218ENST00000513506 ARHGEF12Q9NZN5 1544 aa24.14■■□□□ 1.45
POLR2J3-218ENST00000513506 SAMD9LQ8IVG5 1584 aa24.13■■□□□ 1.45
POLR2J3-218ENST00000513506 RAPGEF3O95398 923 aa24.12■■□□□ 1.45
POLR2J3-218ENST00000513506 FRMPD1Q5SYB0 1578 aa24.12■■□□□ 1.45
POLR2J3-218ENST00000513506 MBD5Q9P267 1494 aa24.11■■□□□ 1.45
POLR2J3-218ENST00000513506 ZNF518AQ6AHZ1 1483 aa24.1■■□□□ 1.45
POLR2J3-218ENST00000513506 ZMYM4Q5VZL5 1548 aa24.1■■□□□ 1.45
POLR2J3-218ENST00000513506 MAGI2Q86UL8 1455 aa24.09■■□□□ 1.45
POLR2J3-218ENST00000513506 RICTORQ6R327 1708 aa24.09■■□□□ 1.45
POLR2J3-218ENST00000513506 ZNF644Q9H582 1327 aaPredicted RBP24.09■■□□□ 1.45
POLR2J3-218ENST00000513506 RSPH4AQ5TD94 716 aa24.08■■□□□ 1.45
POLR2J3-218ENST00000513506 FGD6Q6ZV73 1430 aa24.07■■□□□ 1.44
POLR2J3-218ENST00000513506 TRAPPC8Q9Y2L5 1435 aa24.07■■□□□ 1.44
POLR2J3-218ENST00000513506 KDM5CP41229 1560 aa24.07■■□□□ 1.44
POLR2J3-218ENST00000513506 ZNF777Q9ULD5 760 aaPredicted RBP24.06■■□□□ 1.44
POLR2J3-218ENST00000513506 CAMSAP2Q08AD1 1489 aa24.05■■□□□ 1.44
POLR2J3-218ENST00000513506 TCOF1Q13428 1488 aaKnown RBP24.05■■□□□ 1.44
POLR2J3-218ENST00000513506 AFAP1Q8N556 730 aa24.04■■□□□ 1.44
POLR2J3-218ENST00000513506 MLH3Q9UHC1 1453 aa24.04■■□□□ 1.44
POLR2J3-218ENST00000513506 SYCP2Q9BX26 1530 aa24.03■■□□□ 1.44
POLR2J3-218ENST00000513506 HNRNPMP52272 730 aaKnown RBP eCLIP24.02■■□□□ 1.44
POLR2J3-218ENST00000513506 ARHGEF5Q12774 1597 aa24■■□□□ 1.43
POLR2J3-218ENST00000513506 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.99■■□□□ 1.43
POLR2J3-218ENST00000513506 PTPN23Q9H3S7 1636 aa23.96■■□□□ 1.43
POLR2J3-218ENST00000513506 CCDC141Q6ZP82 1450 aa23.96■■□□□ 1.43
POLR2J3-218ENST00000513506 RTEL1-TNFRSF6BF6WH68 1400 aa23.96■■□□□ 1.43
POLR2J3-218ENST00000513506 PPARGC1BQ86YN6 1023 aaKnown RBP23.93■■□□□ 1.42
POLR2J3-218ENST00000513506 ARHGEF40Q8TER5 1519 aa23.93■■□□□ 1.42
POLR2J3-218ENST00000513506 RRBP1Q9P2E9 1410 aaKnown RBP23.93■■□□□ 1.42
POLR2J3-218ENST00000513506 YEATS2Q9ULM3 1422 aa23.93■■□□□ 1.42
POLR2J3-218ENST00000513506 SPAG9O60271 1321 aaKnown RBP23.92■■□□□ 1.42
POLR2J3-218ENST00000513506 ZFYVE16Q7Z3T8 1539 aa23.92■■□□□ 1.42
POLR2J3-218ENST00000513506 HECW2Q9P2P5 1572 aa23.91■■□□□ 1.42
POLR2J3-218ENST00000513506 ATP10AO60312 1499 aa23.89■■□□□ 1.42
POLR2J3-218ENST00000513506 ABCC5O15440 1437 aa23.89■■□□□ 1.41
POLR2J3-218ENST00000513506 INO80Q9ULG1 1556 aaPredicted RBP23.89■■□□□ 1.41
POLR2J3-218ENST00000513506 REREQ9P2R6 1566 aa23.88■■□□□ 1.41
POLR2J3-218ENST00000513506 SHANK2Q9UPX8 1470 aa23.87■■□□□ 1.41
POLR2J3-218ENST00000513506 MAST1Q9Y2H9 1570 aa23.87■■□□□ 1.41
POLR2J3-218ENST00000513506 TSPY4P0CV99 314 aa23.87■■□□□ 1.41
POLR2J3-218ENST00000513506 TSPY10P0CW01 314 aa23.87■■□□□ 1.41
POLR2J3-218ENST00000513506 KIDINS220Q9ULH0 1771 aa23.87■■□□□ 1.41
POLR2J3-218ENST00000513506 ATP7AQ04656 1500 aa23.86■■□□□ 1.41
POLR2J3-218ENST00000513506 DAPK1P53355 1430 aa23.84■■□□□ 1.41
POLR2J3-218ENST00000513506 DIP2CQ9Y2E4 1556 aa23.84■■□□□ 1.41
POLR2J3-218ENST00000513506 DNMT1P26358 1616 aaKnown RBP23.84■■□□□ 1.41
POLR2J3-218ENST00000513506 C9orf84Q5VXU9 1444 aa23.83■■□□□ 1.4
POLR2J3-218ENST00000513506 ABCA6Q8N139 1617 aa23.81■■□□□ 1.4
POLR2J3-218ENST00000513506 AGLP35573 1532 aa23.79■■□□□ 1.4
POLR2J3-218ENST00000513506 FAM50AQ14320 339 aaKnown RBP23.79■■□□□ 1.4
POLR2J3-218ENST00000513506 ADGRL2O95490 1459 aa23.77■■□□□ 1.4
POLR2J3-218ENST00000513506 DHX29Q7Z478 1369 aaKnown RBP23.77■■□□□ 1.4
POLR2J3-218ENST00000513506 PLXNC1O60486 1568 aa23.75■■□□□ 1.39
POLR2J3-218ENST00000513506 CROCC2H7BZ55 1655 aa23.75■■□□□ 1.39
POLR2J3-218ENST00000513506 PTPRKQ15262 1439 aa23.75■■□□□ 1.39
POLR2J3-218ENST00000513506 NCOA1Q15788 1441 aa23.75■■□□□ 1.39
POLR2J3-218ENST00000513506 A2MP01023 1474 aa23.75■■□□□ 1.39
POLR2J3-218ENST00000513506 MYT1LQ9UL68 1186 aa23.73■■□□□ 1.39
POLR2J3-218ENST00000513506 ROCK1Q13464 1354 aa23.73■■□□□ 1.39
POLR2J3-218ENST00000513506 SIGLEC1Q9BZZ2 1709 aa23.7■■□□□ 1.39
POLR2J3-218ENST00000513506 ADGBQ8N7X0 1667 aa23.7■■□□□ 1.39
POLR2J3-218ENST00000513506 ANKRD30AQ9BXX3 1397 aa23.7■■□□□ 1.38
POLR2J3-218ENST00000513506 DUOX2Q9NRD8 1548 aa23.67■■□□□ 1.38
POLR2J3-218ENST00000513506 KIF15Q9NS87 1388 aa23.66■■□□□ 1.38
POLR2J3-218ENST00000513506 KDM4FA0A1W2PPD8 638 aa23.66■■□□□ 1.38
POLR2J3-218ENST00000513506 PPP6R1Q9UPN7 881 aa23.65■■□□□ 1.38
POLR2J3-218ENST00000513506 BCORL1Q5H9F3 1711 aa23.64■■□□□ 1.38
POLR2J3-218ENST00000513506 ARID4BQ4LE39 1312 aaPredicted RBP23.63■■□□□ 1.37
POLR2J3-218ENST00000513506 ERBINQ96RT1 1412 aa23.63■■□□□ 1.37
POLR2J3-218ENST00000513506 CHIC2Q9UKJ5 165 aa23.63■■□□□ 1.37
POLR2J3-218ENST00000513506 ADAMTSL3P82987 1691 aa23.62■■□□□ 1.37
POLR2J3-218ENST00000513506 RRP7BPQ9NSQ0 103 aa23.61■■□□□ 1.37
POLR2J3-218ENST00000513506 EIF2AK4Q9P2K8 1649 aaKnown RBP23.59■■□□□ 1.37
POLR2J3-218ENST00000513506 FAM135AQ9P2D6 1515 aa23.56■■□□□ 1.36
POLR2J3-218ENST00000513506 KIF3BO15066 747 aa23.55■■□□□ 1.36
POLR2J3-218ENST00000513506 ANKRD50Q9ULJ7 1429 aa23.55■■□□□ 1.36
POLR2J3-218ENST00000513506 RNF17Q9BXT8 1623 aaKnown RBP23.53■■□□□ 1.36
POLR2J3-218ENST00000513506 HFM1A2PYH4 1435 aa23.52■■□□□ 1.36
POLR2J3-218ENST00000513506 CNTLNQ9NXG0 1405 aa23.52■■□□□ 1.36
POLR2J3-218ENST00000513506 ITGAEP38570 1179 aa23.52■■□□□ 1.36
POLR2J3-218ENST00000513506 NAIPQ13075 1403 aa23.5■■□□□ 1.35
POLR2J3-218ENST00000513506 KDM5DQ9BY66 1539 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms