RNA–Protein interactions for RNA: ENST00000513431.5

MGAT1-222, Transcript of mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, human

TSL 2

Gene MGAT1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MGAT1-222	ENST00000513431	ILDR1	Q86SU0	546 aa	Predicted RBP	29.32	■■■□□ 2.28
MGAT1-222	ENST00000513431	EFCAB2	Q5VUJ9	269 aa		29.31	■■■□□ 2.28
MGAT1-222	ENST00000513431	MYO5C	Q9NQX4	1742 aa		29.31	■■■□□ 2.28
MGAT1-222	ENST00000513431	TRO	Q12816	1431 aa	Predicted RBP	29.29	■■■□□ 2.28
MGAT1-222	ENST00000513431	YEATS2	Q9ULM3	1422 aa		29.27	■■■□□ 2.28
MGAT1-222	ENST00000513431	RIMS1	Q86UR5	1692 aa	Known RBP	29.24	■■■□□ 2.27
MGAT1-222	ENST00000513431	ARHGAP5	Q13017	1502 aa		29.22	■■■□□ 2.27
MGAT1-222	ENST00000513431	CCDC18	Q5T9S5	1454 aa		29.2	■■■□□ 2.26
MGAT1-222	ENST00000513431	CASKIN1	Q8WXD9	1431 aa		29.19	■■■□□ 2.26
MGAT1-222	ENST00000513431	PCF11	O94913	1555 aa	Known RBP	29.18	■■■□□ 2.26
MGAT1-222	ENST00000513431	ZNF518A	Q6AHZ1	1483 aa		29.17	■■■□□ 2.26
MGAT1-222	ENST00000513431	LRRIQ1	Q96JM4	1722 aa		29.17	■■■□□ 2.26
MGAT1-222	ENST00000513431	MLEC	Q14165	292 aa		29.16	■■■□□ 2.26
MGAT1-222	ENST00000513431	ATP10A	O60312	1499 aa		29.16	■■■□□ 2.26
MGAT1-222	ENST00000513431	C9orf84	Q5VXU9	1444 aa		29.15	■■■□□ 2.26
MGAT1-222	ENST00000513431	PLPPR3	Q6T4P5	718 aa		29.14	■■■□□ 2.26
MGAT1-222	ENST00000513431	SIGLEC1	Q9BZZ2	1709 aa		29.13	■■■□□ 2.25
MGAT1-222	ENST00000513431	LMTK3	Q96Q04	1460 aa		29.12	■■■□□ 2.25
MGAT1-222	ENST00000513431	MYT1L	Q9UL68	1186 aa		29.11	■■■□□ 2.25
MGAT1-222	ENST00000513431	FYCO1	Q9BQS8	1478 aa		29.09	■■■□□ 2.25
MGAT1-222	ENST00000513431	FER1L4	A9Z1Z3	1794 aa		29.08	■■■□□ 2.25
MGAT1-222	ENST00000513431	KDM5C	P41229	1560 aa		29.07	■■■□□ 2.24
MGAT1-222	ENST00000513431	AFAP1	Q8N556	730 aa		29.07	■■■□□ 2.24
MGAT1-222	ENST00000513431	PREX2	Q70Z35	1606 aa		29.05	■■■□□ 2.24
MGAT1-222	ENST00000513431	CDC42BPB	Q9Y5S2	1711 aa		29.04	■■■□□ 2.24
MGAT1-222	ENST00000513431	ARHGEF12	Q9NZN5	1544 aa		29.03	■■■□□ 2.24
MGAT1-222	ENST00000513431	ABCC1	P33527	1531 aa		28.99	■■■□□ 2.23
MGAT1-222	ENST00000513431	MLH3	Q9UHC1	1453 aa		28.97	■■■□□ 2.23
MGAT1-222	ENST00000513431	HSPA2	P54652	639 aa		28.97	■■■□□ 2.23
MGAT1-222	ENST00000513431	DIP2C	Q9Y2E4	1556 aa		28.96	■■■□□ 2.23
MGAT1-222	ENST00000513431	FBXO41	Q8TF61	875 aa		28.94	■■■□□ 2.22
MGAT1-222	ENST00000513431	TRAPPC8	Q9Y2L5	1435 aa		28.94	■■■□□ 2.22
MGAT1-222	ENST00000513431	ITSN2	Q9NZM3	1697 aa		28.93	■■■□□ 2.22
MGAT1-222	ENST00000513431	RERE	Q9P2R6	1566 aa		28.93	■■■□□ 2.22
MGAT1-222	ENST00000513431	CDC42BPA	Q5VT25	1732 aa		28.92	■■■□□ 2.22
MGAT1-222	ENST00000513431	ABCA6	Q8N139	1617 aa		28.91	■■■□□ 2.22
MGAT1-222	ENST00000513431	ZNF777	Q9ULD5	760 aa	Predicted RBP	28.9	■■■□□ 2.22
MGAT1-222	ENST00000513431	ESF1	Q9H501	851 aa	Known RBP	28.88	■■■□□ 2.21
MGAT1-222	ENST00000513431	CEBPA	P49715	358 aa	Predicted RBP	28.86	■■■□□ 2.21
MGAT1-222	ENST00000513431	PREX1	Q8TCU6	1659 aa		28.86	■■■□□ 2.21
MGAT1-222	ENST00000513431	AGL	P35573	1532 aa		28.85	■■■□□ 2.21
MGAT1-222	ENST00000513431	GPATCH8	Q9UKJ3	1502 aa	Known RBP	28.84	■■■□□ 2.21
MGAT1-222	ENST00000513431	MTUS2	Q5JR59	1369 aa		28.84	■■■□□ 2.21
MGAT1-222	ENST00000513431	CCNB3	Q8WWL7	1395 aa		28.82	■■■□□ 2.2
MGAT1-222	ENST00000513431	SYCP2	Q9BX26	1530 aa		28.82	■■■□□ 2.2
MGAT1-222	ENST00000513431	SAMD9L	Q8IVG5	1584 aa		28.82	■■■□□ 2.2
MGAT1-222	ENST00000513431	CFDP1	Q9UEE9	299 aa	Predicted RBP	28.81	■■■□□ 2.2
MGAT1-222	ENST00000513431	KIDINS220	Q9ULH0	1771 aa		28.8	■■■□□ 2.2
MGAT1-222	ENST00000513431	PLEKHH2	Q8IVE3	1493 aa		28.8	■■■□□ 2.2
MGAT1-222	ENST00000513431	UHRF1BP1	Q6BDS2	1440 aa		28.79	■■■□□ 2.2
MGAT1-222	ENST00000513431	SPAG9	O60271	1321 aa	Known RBP	28.79	■■■□□ 2.2
MGAT1-222	ENST00000513431	KIAA1107	Q9UPP5	1409 aa		28.77	■■■□□ 2.2
MGAT1-222	ENST00000513431	HNRNPM	P52272	730 aa	Known RBP eCLIP	28.76	■■■□□ 2.19	3e-8	■■■■■ 35.6
MGAT1-222	ENST00000513431	CNTLN	Q9NXG0	1405 aa		28.75	■■■□□ 2.19
MGAT1-222	ENST00000513431	SETD1B	Q9UPS6	1966 aa	Known RBP	28.73	■■■□□ 2.19
MGAT1-222	ENST00000513431	C3	P01024	1663 aa		28.71	■■■□□ 2.19
MGAT1-222	ENST00000513431	CEP162	Q5TB80	1403 aa		28.71	■■■□□ 2.19
MGAT1-222	ENST00000513431	EHBP1L1	Q8N3D4	1523 aa		28.71	■■■□□ 2.19
MGAT1-222	ENST00000513431	ATP7A	Q04656	1500 aa		28.7	■■■□□ 2.19
MGAT1-222	ENST00000513431	DMRT2	Q9Y5R5	561 aa		28.7	■■■□□ 2.18
MGAT1-222	ENST00000513431	INO80	Q9ULG1	1556 aa	Predicted RBP	28.65	■■■□□ 2.18
MGAT1-222	ENST00000513431	TIAM1	Q13009	1591 aa		28.64	■■■□□ 2.18
MGAT1-222	ENST00000513431	CERK	Q8TCT0	537 aa		28.64	■■■□□ 2.18
MGAT1-222	ENST00000513431	SUPT6H	Q7KZ85	1726 aa	Known RBP	28.63	■■■□□ 2.17
MGAT1-222	ENST00000513431	A2M	P01023	1474 aa		28.62	■■■□□ 2.17
MGAT1-222	ENST00000513431	MROH2A	A6NES4	1674 aa		28.6	■■■□□ 2.17
MGAT1-222	ENST00000513431	PLXNC1	O60486	1568 aa		28.59	■■■□□ 2.17
MGAT1-222	ENST00000513431	STRC	Q7RTU9	1775 aa		28.58	■■■□□ 2.17
MGAT1-222	ENST00000513431	NPAT	Q14207	1427 aa		28.58	■■■□□ 2.17
MGAT1-222	ENST00000513431	ZNF644	Q9H582	1327 aa	Predicted RBP	28.57	■■■□□ 2.16
MGAT1-222	ENST00000513431	ZMYM3	Q14202	1370 aa		28.57	■■■□□ 2.16
MGAT1-222	ENST00000513431	ADGB	Q8N7X0	1667 aa		28.54	■■■□□ 2.16
MGAT1-222	ENST00000513431	GGT6	Q6P531	493 aa		28.53	■■■□□ 2.16
MGAT1-222	ENST00000513431	MBD5	Q9P267	1494 aa		28.53	■■■□□ 2.16
MGAT1-222	ENST00000513431	PTPRT	O14522	1441 aa		28.52	■■■□□ 2.16
MGAT1-222	ENST00000513431	NCOA2	Q15596	1464 aa		28.51	■■■□□ 2.15
MGAT1-222	ENST00000513431	CLTC	Q00610	1675 aa	Known RBP	28.51	■■■□□ 2.15
MGAT1-222	ENST00000513431	RTEL1-TNFRSF6B	F6WH68	1400 aa		28.51	■■■□□ 2.15
MGAT1-222	ENST00000513431	PPP6R1	Q9UPN7	881 aa		28.5	■■■□□ 2.15
MGAT1-222	ENST00000513431	NCOA1	Q15788	1441 aa		28.47	■■■□□ 2.15
MGAT1-222	ENST00000513431	CCDC141	Q6ZP82	1450 aa		28.46	■■■□□ 2.15
MGAT1-222	ENST00000513431	RSPH4A	Q5TD94	716 aa		28.45	■■■□□ 2.14
MGAT1-222	ENST00000513431	CAMSAP2	Q08AD1	1489 aa		28.45	■■■□□ 2.14
MGAT1-222	ENST00000513431	DHX29	Q7Z478	1369 aa	Known RBP	28.43	■■■□□ 2.14
MGAT1-222	ENST00000513431	CAMSAP1	Q5T5Y3	1602 aa		28.43	■■■□□ 2.14
MGAT1-222	ENST00000513431	VPS8	Q8N3P4	1428 aa		28.43	■■■□□ 2.14
MGAT1-222	ENST00000513431	PTPRK	Q15262	1439 aa		28.41	■■■□□ 2.14
MGAT1-222	ENST00000513431	MYO3A	Q8NEV4	1616 aa		28.4	■■■□□ 2.14
MGAT1-222	ENST00000513431	ZNF142	P52746	1687 aa	Predicted RBP	28.36	■■■□□ 2.13
MGAT1-222	ENST00000513431	LOC105371045	A0A1W2PR82	267 aa		28.36	■■■□□ 2.13
MGAT1-222	ENST00000513431	KIF3B	O15066	747 aa		28.36	■■■□□ 2.13
MGAT1-222	ENST00000513431	LRRC9	Q6ZRR7	1453 aa		28.35	■■■□□ 2.13
MGAT1-222	ENST00000513431	TSPY4	P0CV99	314 aa		28.35	■■■□□ 2.13
MGAT1-222	ENST00000513431	TSPY10	P0CW01	314 aa		28.35	■■■□□ 2.13
MGAT1-222	ENST00000513431	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	28.35	■■■□□ 2.13
MGAT1-222	ENST00000513431	ARHGEF5	Q12774	1597 aa		28.33	■■■□□ 2.13
MGAT1-222	ENST00000513431	PLA2R1	Q13018	1463 aa		28.33	■■■□□ 2.13
MGAT1-222	ENST00000513431	PKD2	Q13563	968 aa		28.32	■■■□□ 2.12
MGAT1-222	ENST00000513431	FAM135A	Q9P2D6	1515 aa		28.32	■■■□□ 2.12
MGAT1-222	ENST00000513431	KDM5D	Q9BY66	1539 aa		28.3	■■■□□ 2.12

Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms