RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 AKNAQ7Z591 1439 aa32.69■■■□□ 2.82
NEIL3-202ENST00000513321 CFDP1Q9UEE9 299 aaPredicted RBP32.69■■■□□ 2.82
NEIL3-202ENST00000513321 CDC42BPAQ5VT25 1732 aa32.68■■■□□ 2.82
NEIL3-202ENST00000513321 PPARGC1BQ86YN6 1023 aaKnown RBP32.67■■■□□ 2.82
NEIL3-202ENST00000513321 PREX2Q70Z35 1606 aa32.67■■■□□ 2.82
NEIL3-202ENST00000513321 COL17A1Q9UMD9 1497 aaPredicted RBP32.67■■■□□ 2.82
NEIL3-202ENST00000513321 CDC42BPBQ9Y5S2 1711 aa32.66■■■□□ 2.82
NEIL3-202ENST00000513321 ZNF777Q9ULD5 760 aaPredicted RBP32.65■■■□□ 2.82
NEIL3-202ENST00000513321 KDM6BO15054 1643 aa32.64■■■□□ 2.82
NEIL3-202ENST00000513321 CFAP74Q9C0B2 1584 aa32.64■■■□□ 2.82
NEIL3-202ENST00000513321 ADGRL1O94910 1474 aa32.58■■■□□ 2.81
NEIL3-202ENST00000513321 RAPGEF3O95398 923 aa32.57■■■□□ 2.8
NEIL3-202ENST00000513321 SCAPERQ9BY12 1400 aa32.57■■■□□ 2.8
NEIL3-202ENST00000513321 ITSN2Q9NZM3 1697 aa32.56■■■□□ 2.8
NEIL3-202ENST00000513321 ZNF644Q9H582 1327 aaPredicted RBP32.54■■■□□ 2.8
NEIL3-202ENST00000513321 MYOM3Q5VTT5 1437 aa32.54■■■□□ 2.8
NEIL3-202ENST00000513321 DENND4BO75064 1496 aaPredicted RBP32.54■■■□□ 2.8
NEIL3-202ENST00000513321 SAMD9LQ8IVG5 1584 aa32.49■■■□□ 2.79
NEIL3-202ENST00000513321 HNRNPMP52272 730 aaKnown RBP eCLIP32.48■■■□□ 2.79
NEIL3-202ENST00000513321 MIA2Q96PC5 1412 aa32.47■■■□□ 2.79
NEIL3-202ENST00000513321 ABCC1P33527 1531 aa32.46■■■□□ 2.79
NEIL3-202ENST00000513321 ARHGEF12Q9NZN5 1544 aa32.46■■■□□ 2.79
NEIL3-202ENST00000513321 PLEKHH2Q8IVE3 1493 aa32.45■■■□□ 2.79
NEIL3-202ENST00000513321 AFAP1Q8N556 730 aa32.45■■■□□ 2.78
NEIL3-202ENST00000513321 KIAA1107Q9UPP5 1409 aa32.44■■■□□ 2.78
NEIL3-202ENST00000513321 POGZQ7Z3K3 1410 aa32.43■■■□□ 2.78
NEIL3-202ENST00000513321 TRAPPC8Q9Y2L5 1435 aa32.41■■■□□ 2.78
NEIL3-202ENST00000513321 FRMPD1Q5SYB0 1578 aa32.4■■■□□ 2.78
NEIL3-202ENST00000513321 SYCP2Q9BX26 1530 aa32.4■■■□□ 2.78
NEIL3-202ENST00000513321 CAMSAP2Q08AD1 1489 aa32.4■■■□□ 2.78
NEIL3-202ENST00000513321 FGD6Q6ZV73 1430 aa32.4■■■□□ 2.78
NEIL3-202ENST00000513321 RICTORQ6R327 1708 aa32.39■■■□□ 2.78
NEIL3-202ENST00000513321 ZNF518AQ6AHZ1 1483 aa32.38■■■□□ 2.77
NEIL3-202ENST00000513321 MBD5Q9P267 1494 aa32.35■■■□□ 2.77
NEIL3-202ENST00000513321 RSPH4AQ5TD94 716 aa32.31■■■□□ 2.76
NEIL3-202ENST00000513321 PTPN23Q9H3S7 1636 aa32.31■■■□□ 2.76
NEIL3-202ENST00000513321 MYT1LQ9UL68 1186 aa32.3■■■□□ 2.76
NEIL3-202ENST00000513321 ZMYM4Q5VZL5 1548 aa32.29■■■□□ 2.76
NEIL3-202ENST00000513321 FAM50AQ14320 339 aaKnown RBP32.28■■■□□ 2.76
NEIL3-202ENST00000513321 KDM5CP41229 1560 aa32.28■■■□□ 2.76
NEIL3-202ENST00000513321 TCOF1Q13428 1488 aaKnown RBP32.28■■■□□ 2.76
NEIL3-202ENST00000513321 MAGI2Q86UL8 1455 aa32.26■■■□□ 2.76
NEIL3-202ENST00000513321 SPAG9O60271 1321 aaKnown RBP32.26■■■□□ 2.76
NEIL3-202ENST00000513321 CCDC141Q6ZP82 1450 aa32.23■■■□□ 2.75
NEIL3-202ENST00000513321 MLH3Q9UHC1 1453 aa32.23■■■□□ 2.75
NEIL3-202ENST00000513321 YEATS2Q9ULM3 1422 aa32.22■■■□□ 2.75
NEIL3-202ENST00000513321 ARHGEF5Q12774 1597 aa32.22■■■□□ 2.75
NEIL3-202ENST00000513321 TSPY4P0CV99 314 aa32.21■■■□□ 2.75
NEIL3-202ENST00000513321 TSPY10P0CW01 314 aa32.21■■■□□ 2.75
NEIL3-202ENST00000513321 ZFYVE16Q7Z3T8 1539 aa32.2■■■□□ 2.74
NEIL3-202ENST00000513321 HECW2Q9P2P5 1572 aa32.18■■■□□ 2.74
NEIL3-202ENST00000513321 ABCC5O15440 1437 aa32.15■■■□□ 2.74
NEIL3-202ENST00000513321 ARHGEF40Q8TER5 1519 aa32.14■■■□□ 2.74
NEIL3-202ENST00000513321 RRBP1Q9P2E9 1410 aaKnown RBP32.14■■■□□ 2.74
NEIL3-202ENST00000513321 KIDINS220Q9ULH0 1771 aa32.12■■■□□ 2.73
NEIL3-202ENST00000513321 RTEL1-TNFRSF6BF6WH68 1400 aa32.12■■■□□ 2.73
NEIL3-202ENST00000513321 DAPK1P53355 1430 aa32.12■■■□□ 2.73
NEIL3-202ENST00000513321 ATP7AQ04656 1500 aa32.12■■■□□ 2.73
NEIL3-202ENST00000513321 ATP10AO60312 1499 aa32.11■■■□□ 2.73
NEIL3-202ENST00000513321 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.1■■■□□ 2.73
NEIL3-202ENST00000513321 INO80Q9ULG1 1556 aaPredicted RBP32.09■■■□□ 2.73
NEIL3-202ENST00000513321 DNMT1P26358 1616 aaKnown RBP32.08■■■□□ 2.73
NEIL3-202ENST00000513321 C9orf84Q5VXU9 1444 aa32.07■■■□□ 2.72
NEIL3-202ENST00000513321 DIP2CQ9Y2E4 1556 aa32.07■■■□□ 2.72
NEIL3-202ENST00000513321 ABCA6Q8N139 1617 aa32.06■■■□□ 2.72
NEIL3-202ENST00000513321 CHIC2Q9UKJ5 165 aa32.05■■■□□ 2.72
NEIL3-202ENST00000513321 ITGAEP38570 1179 aa32.04■■■□□ 2.72
NEIL3-202ENST00000513321 ARID4BQ4LE39 1312 aaPredicted RBP32.03■■■□□ 2.72
NEIL3-202ENST00000513321 MAST1Q9Y2H9 1570 aa32.03■■■□□ 2.72
NEIL3-202ENST00000513321 SHANK2Q9UPX8 1470 aa32.02■■■□□ 2.72
NEIL3-202ENST00000513321 CROCC2H7BZ55 1655 aa31.99■■■□□ 2.71
NEIL3-202ENST00000513321 PTPRKQ15262 1439 aa31.98■■■□□ 2.71
NEIL3-202ENST00000513321 A2MP01023 1474 aa31.97■■■□□ 2.71
NEIL3-202ENST00000513321 RRP7BPQ9NSQ0 103 aa31.95■■■□□ 2.71
NEIL3-202ENST00000513321 REREQ9P2R6 1566 aa31.94■■■□□ 2.7
NEIL3-202ENST00000513321 DHX29Q7Z478 1369 aaKnown RBP31.93■■■□□ 2.7
NEIL3-202ENST00000513321 ANKRD30AQ9BXX3 1397 aa31.93■■■□□ 2.7
NEIL3-202ENST00000513321 SIGLEC1Q9BZZ2 1709 aa31.92■■■□□ 2.7
NEIL3-202ENST00000513321 NCOA1Q15788 1441 aa31.91■■■□□ 2.7
NEIL3-202ENST00000513321 ADGBQ8N7X0 1667 aa31.9■■■□□ 2.7
NEIL3-202ENST00000513321 KIF15Q9NS87 1388 aa31.89■■■□□ 2.7
NEIL3-202ENST00000513321 PLXNC1O60486 1568 aa31.89■■■□□ 2.7
NEIL3-202ENST00000513321 MLECQ14165 292 aa31.89■■■□□ 2.7
NEIL3-202ENST00000513321 ADGRL2O95490 1459 aa31.88■■■□□ 2.69
NEIL3-202ENST00000513321 AGLP35573 1532 aa31.87■■■□□ 2.69
NEIL3-202ENST00000513321 ROCK1Q13464 1354 aa31.83■■■□□ 2.69
NEIL3-202ENST00000513321 KDM4FA0A1W2PPD8 638 aa31.83■■■□□ 2.69
NEIL3-202ENST00000513321 KIF3BO15066 747 aa31.82■■■□□ 2.68
NEIL3-202ENST00000513321 DUOX2Q9NRD8 1548 aa31.82■■■□□ 2.68
NEIL3-202ENST00000513321 BCORL1Q5H9F3 1711 aa31.78■■■□□ 2.68
NEIL3-202ENST00000513321 GGT6Q6P531 493 aa31.78■■■□□ 2.68
NEIL3-202ENST00000513321 ERBINQ96RT1 1412 aa31.73■■■□□ 2.67
NEIL3-202ENST00000513321 ANKRD50Q9ULJ7 1429 aa31.71■■■□□ 2.67
NEIL3-202ENST00000513321 ADAMTSL3P82987 1691 aa31.71■■■□□ 2.67
NEIL3-202ENST00000513321 ESF1Q9H501 851 aaKnown RBP31.67■■■□□ 2.66
NEIL3-202ENST00000513321 EIF2AK4Q9P2K8 1649 aaKnown RBP31.66■■■□□ 2.66
NEIL3-202ENST00000513321 PPP6R1Q9UPN7 881 aa31.66■■■□□ 2.66
NEIL3-202ENST00000513321 MADDQ8WXG6 1647 aa31.64■■■□□ 2.66
NEIL3-202ENST00000513321 NAIPQ13075 1403 aa31.63■■■□□ 2.65
NEIL3-202ENST00000513321 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms