RNA–Protein interactions for RNA: ENST00000513151.5

SKP2-206, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3

Gene SKP2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-206ENST00000513151 CCNB3Q8WWL7 1395 aa14.09□□□□□ -0.15
SKP2-206ENST00000513151 GPATCH8Q9UKJ3 1502 aaKnown RBP14.08□□□□□ -0.16
SKP2-206ENST00000513151 SCAPERQ9BY12 1400 aa14.07□□□□□ -0.16
SKP2-206ENST00000513151 ADGRL1O94910 1474 aa14.07□□□□□ -0.16
SKP2-206ENST00000513151 LRRC9Q6ZRR7 1453 aa14.07□□□□□ -0.16
SKP2-206ENST00000513151 KANK4Q5T7N3 995 aaPredicted RBP14.07□□□□□ -0.16
SKP2-206ENST00000513151 CFDP1Q9UEE9 299 aaPredicted RBP14.06□□□□□ -0.16
SKP2-206ENST00000513151 PREX2Q70Z35 1606 aa14.05□□□□□ -0.16
SKP2-206ENST00000513151 CDC42BPBQ9Y5S2 1711 aa14.05□□□□□ -0.16
SKP2-206ENST00000513151 ZNF777Q9ULD5 760 aaPredicted RBP14.04□□□□□ -0.16
SKP2-206ENST00000513151 NCOA2Q15596 1464 aa14.04□□□□□ -0.16
SKP2-206ENST00000513151 CDC42BPAQ5VT25 1732 aa14.04□□□□□ -0.16
SKP2-206ENST00000513151 SUPT6HQ7KZ85 1726 aaKnown RBP14.02□□□□□ -0.16
SKP2-206ENST00000513151 FRMPD1Q5SYB0 1578 aa14.02□□□□□ -0.16
SKP2-206ENST00000513151 POGZQ7Z3K3 1410 aa14.01□□□□□ -0.17
SKP2-206ENST00000513151 AFAP1Q8N556 730 aa14.01□□□□□ -0.17
SKP2-206ENST00000513151 RICTORQ6R327 1708 aa14.01□□□□□ -0.17
SKP2-206ENST00000513151 ARHGEF12Q9NZN5 1544 aa13.99□□□□□ -0.17
SKP2-206ENST00000513151 ZNF518AQ6AHZ1 1483 aa13.99□□□□□ -0.17
SKP2-206ENST00000513151 MAGI2Q86UL8 1455 aa13.99□□□□□ -0.17
SKP2-206ENST00000513151 HNRNPMP52272 730 aaKnown RBP eCLIP13.98□□□□□ -0.17
SKP2-206ENST00000513151 ABCC1P33527 1531 aa13.98□□□□□ -0.17
SKP2-206ENST00000513151 ZMYM4Q5VZL5 1548 aa13.98□□□□□ -0.17
SKP2-206ENST00000513151 PLEKHH2Q8IVE3 1493 aa13.98□□□□□ -0.17
SKP2-206ENST00000513151 KIAA1107Q9UPP5 1409 aa13.98□□□□□ -0.17
SKP2-206ENST00000513151 SAMD9LQ8IVG5 1584 aa13.97□□□□□ -0.17
SKP2-206ENST00000513151 ZNF644Q9H582 1327 aaPredicted RBP13.97□□□□□ -0.17
SKP2-206ENST00000513151 ITSN2Q9NZM3 1697 aa13.97□□□□□ -0.17
SKP2-206ENST00000513151 TRAPPC8Q9Y2L5 1435 aa13.97□□□□□ -0.17
SKP2-206ENST00000513151 MYT1LQ9UL68 1186 aa13.95□□□□□ -0.18
SKP2-206ENST00000513151 KDM4FA0A1W2PPD8 638 aa13.94□□□□□ -0.18
SKP2-206ENST00000513151 KDM5CP41229 1560 aa13.94□□□□□ -0.18
SKP2-206ENST00000513151 YEATS2Q9ULM3 1422 aa13.94□□□□□ -0.18
SKP2-206ENST00000513151 ZFYVE16Q7Z3T8 1539 aa13.94□□□□□ -0.18
SKP2-206ENST00000513151 SYCP2Q9BX26 1530 aa13.94□□□□□ -0.18
SKP2-206ENST00000513151 MLH3Q9UHC1 1453 aa13.93□□□□□ -0.18
SKP2-206ENST00000513151 MYOM3Q5VTT5 1437 aa13.93□□□□□ -0.18
SKP2-206ENST00000513151 ARHGEF40Q8TER5 1519 aa13.92□□□□□ -0.18
SKP2-206ENST00000513151 RSPH4AQ5TD94 716 aa13.92□□□□□ -0.18
SKP2-206ENST00000513151 ATP10AO60312 1499 aa13.92□□□□□ -0.18
SKP2-206ENST00000513151 SPAG9O60271 1321 aaKnown RBP13.91□□□□□ -0.18
SKP2-206ENST00000513151 ARID4BQ4LE39 1312 aaPredicted RBP13.91□□□□□ -0.18
SKP2-206ENST00000513151 MIA2Q96PC5 1412 aa13.91□□□□□ -0.18
SKP2-206ENST00000513151 MBD5Q9P267 1494 aa13.91□□□□□ -0.18
SKP2-206ENST00000513151 AEBP2Q6ZN18 517 aaPredicted RBP13.9□□□□□ -0.18
SKP2-206ENST00000513151 CAMSAP2Q08AD1 1489 aa13.9□□□□□ -0.18
SKP2-206ENST00000513151 HECW2Q9P2P5 1572 aa13.89□□□□□ -0.19
SKP2-206ENST00000513151 C9orf84Q5VXU9 1444 aa13.87□□□□□ -0.19
SKP2-206ENST00000513151 TSPY4P0CV99 314 aa13.86□□□□□ -0.19
SKP2-206ENST00000513151 TSPY10P0CW01 314 aa13.86□□□□□ -0.19
SKP2-206ENST00000513151 DIP2CQ9Y2E4 1556 aa13.85□□□□□ -0.19
SKP2-206ENST00000513151 RTEL1-TNFRSF6BF6WH68 1400 aa13.85□□□□□ -0.19
SKP2-206ENST00000513151 FGD6Q6ZV73 1430 aa13.85□□□□□ -0.19
SKP2-206ENST00000513151 PPARGC1BQ86YN6 1023 aaKnown RBP13.85□□□□□ -0.19
SKP2-206ENST00000513151 KIDINS220Q9ULH0 1771 aa13.85□□□□□ -0.19
SKP2-206ENST00000513151 CCDC141Q6ZP82 1450 aa13.85□□□□□ -0.19
SKP2-206ENST00000513151 ARHGEF5Q12774 1597 aa13.84□□□□□ -0.19
SKP2-206ENST00000513151 ATP7AQ04656 1500 aa13.84□□□□□ -0.19
SKP2-206ENST00000513151 ABCA6Q8N139 1617 aa13.83□□□□□ -0.2
SKP2-206ENST00000513151 REREQ9P2R6 1566 aa13.83□□□□□ -0.2
SKP2-206ENST00000513151 MLECQ14165 292 aa13.82□□□□□ -0.2
SKP2-206ENST00000513151 INO80Q9ULG1 1556 aaPredicted RBP13.82□□□□□ -0.2
SKP2-206ENST00000513151 PTPN23Q9H3S7 1636 aa13.82□□□□□ -0.2
SKP2-206ENST00000513151 TCOF1Q13428 1488 aaKnown RBP13.81□□□□□ -0.2
SKP2-206ENST00000513151 BCORL1Q5H9F3 1711 aa13.81□□□□□ -0.2
SKP2-206ENST00000513151 SIGLEC1Q9BZZ2 1709 aa13.81□□□□□ -0.2
SKP2-206ENST00000513151 ADAMTSL3P82987 1691 aa13.8□□□□□ -0.2
SKP2-206ENST00000513151 AGLP35573 1532 aa13.8□□□□□ -0.2
SKP2-206ENST00000513151 FAM50AQ14320 339 aaKnown RBP13.79□□□□□ -0.2
SKP2-206ENST00000513151 A2MP01023 1474 aa13.79□□□□□ -0.2
SKP2-206ENST00000513151 DHX29Q7Z478 1369 aaKnown RBP13.78□□□□□ -0.2
SKP2-206ENST00000513151 ABCC5O15440 1437 aa13.78□□□□□ -0.2
SKP2-206ENST00000513151 MAST1Q9Y2H9 1570 aa13.76□□□□□ -0.21
SKP2-206ENST00000513151 DAPK1P53355 1430 aa13.75□□□□□ -0.21
SKP2-206ENST00000513151 ADGBQ8N7X0 1667 aa13.75□□□□□ -0.21
SKP2-206ENST00000513151 MADDQ8WXG6 1647 aa13.75□□□□□ -0.21
SKP2-206ENST00000513151 PLXNC1O60486 1568 aa13.75□□□□□ -0.21
SKP2-206ENST00000513151 PTPRMP28827 1452 aa13.74□□□□□ -0.21
SKP2-206ENST00000513151 DNMT1P26358 1616 aaKnown RBP13.74□□□□□ -0.21
SKP2-206ENST00000513151 SHANK2Q9UPX8 1470 aa13.74□□□□□ -0.21
SKP2-206ENST00000513151 ESF1Q9H501 851 aaKnown RBP13.73□□□□□ -0.21
SKP2-206ENST00000513151 KIF3BO15066 747 aa13.72□□□□□ -0.21
SKP2-206ENST00000513151 GGT6Q6P531 493 aa13.72□□□□□ -0.21
SKP2-206ENST00000513151 CHIC2Q9UKJ5 165 aa13.72□□□□□ -0.21
SKP2-206ENST00000513151 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.71□□□□□ -0.21
SKP2-206ENST00000513151 RRP7BPQ9NSQ0 103 aa13.71□□□□□ -0.21
SKP2-206ENST00000513151 PPP6R1Q9UPN7 881 aa13.71□□□□□ -0.21
SKP2-206ENST00000513151 RIMS1Q86UR5 1692 aaKnown RBP13.7□□□□□ -0.22
SKP2-206ENST00000513151 ANKRD30AQ9BXX3 1397 aa13.7□□□□□ -0.22
SKP2-206ENST00000513151 CROCC2H7BZ55 1655 aa13.69□□□□□ -0.22
SKP2-206ENST00000513151 KIF15Q9NS87 1388 aa13.69□□□□□ -0.22
SKP2-206ENST00000513151 FER1L4A9Z1Z3 1794 aa13.68□□□□□ -0.22
SKP2-206ENST00000513151 NCOA1Q15788 1441 aa13.68□□□□□ -0.22
SKP2-206ENST00000513151 CNTLNQ9NXG0 1405 aa13.68□□□□□ -0.22
SKP2-206ENST00000513151 PLPPR3Q6T4P5 718 aa13.68□□□□□ -0.22
SKP2-206ENST00000513151 DUOX2Q9NRD8 1548 aa13.68□□□□□ -0.22
SKP2-206ENST00000513151 RRBP1Q9P2E9 1410 aaKnown RBP13.67□□□□□ -0.22
SKP2-206ENST00000513151 CEBPAP49715 358 aaPredicted RBP13.67□□□□□ -0.22
SKP2-206ENST00000513151 PTPRKQ15262 1439 aa13.66□□□□□ -0.22
SKP2-206ENST00000513151 ITGAEP38570 1179 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms