RNA–Protein interactions for RNA: ENST00000513101.1

ACSF2-223, Transcript of acyl-CoA synthetase family member 2, human

TSL 4

Gene ACSF2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-223	ENST00000513101	TIAM1	Q13009	1591 aa		13.71	□□□□□ -0.22
ACSF2-223	ENST00000513101	CFAP74	Q9C0B2	1584 aa		13.71	□□□□□ -0.22
ACSF2-223	ENST00000513101	CCNB3	Q8WWL7	1395 aa		13.71	□□□□□ -0.22
ACSF2-223	ENST00000513101	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.7	□□□□□ -0.22
ACSF2-223	ENST00000513101	SCAPER	Q9BY12	1400 aa		13.7	□□□□□ -0.22
ACSF2-223	ENST00000513101	LRRC9	Q6ZRR7	1453 aa		13.69	□□□□□ -0.22
ACSF2-223	ENST00000513101	KANK4	Q5T7N3	995 aa	Predicted RBP	13.69	□□□□□ -0.22
ACSF2-223	ENST00000513101	ARHGAP5	Q13017	1502 aa		13.69	□□□□□ -0.22
ACSF2-223	ENST00000513101	ADGRL1	O94910	1474 aa		13.68	□□□□□ -0.22
ACSF2-223	ENST00000513101	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.68	□□□□□ -0.22
ACSF2-223	ENST00000513101	KDM4F	A0A1W2PPD8	638 aa		13.67	□□□□□ -0.22
ACSF2-223	ENST00000513101	MYO5C	Q9NQX4	1742 aa		13.67	□□□□□ -0.22
ACSF2-223	ENST00000513101	NCOA2	Q15596	1464 aa		13.65	□□□□□ -0.22
ACSF2-223	ENST00000513101	POGZ	Q7Z3K3	1410 aa		13.64	□□□□□ -0.23
ACSF2-223	ENST00000513101	MAGI2	Q86UL8	1455 aa		13.64	□□□□□ -0.23
ACSF2-223	ENST00000513101	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.64	□□□□□ -0.23
ACSF2-223	ENST00000513101	PREX2	Q70Z35	1606 aa		13.64	□□□□□ -0.23
ACSF2-223	ENST00000513101	AFAP1	Q8N556	730 aa		13.63	□□□□□ -0.23
ACSF2-223	ENST00000513101	KIAA1107	Q9UPP5	1409 aa		13.63	□□□□□ -0.23
ACSF2-223	ENST00000513101	FRMPD1	Q5SYB0	1578 aa		13.62	□□□□□ -0.23
ACSF2-223	ENST00000513101	ZNF518A	Q6AHZ1	1483 aa		13.62	□□□□□ -0.23
ACSF2-223	ENST00000513101	CDC42BPB	Q9Y5S2	1711 aa		13.62	□□□□□ -0.23
ACSF2-223	ENST00000513101	PLEKHH2	Q8IVE3	1493 aa		13.61	□□□□□ -0.23
ACSF2-223	ENST00000513101	CDC42BPA	Q5VT25	1732 aa		13.61	□□□□□ -0.23
ACSF2-223	ENST00000513101	ZMYM4	Q5VZL5	1548 aa		13.6	□□□□□ -0.23
ACSF2-223	ENST00000513101	ARHGEF12	Q9NZN5	1544 aa		13.6	□□□□□ -0.23
ACSF2-223	ENST00000513101	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.6	□□□□□ -0.23	8e-7	■■□□□ 14.4
ACSF2-223	ENST00000513101	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.6	□□□□□ -0.23
ACSF2-223	ENST00000513101	TRAPPC8	Q9Y2L5	1435 aa		13.6	□□□□□ -0.23
ACSF2-223	ENST00000513101	ABCC1	P33527	1531 aa		13.59	□□□□□ -0.23
ACSF2-223	ENST00000513101	RICTOR	Q6R327	1708 aa		13.59	□□□□□ -0.23
ACSF2-223	ENST00000513101	RSPH4A	Q5TD94	716 aa		13.59	□□□□□ -0.23
ACSF2-223	ENST00000513101	ZNF644	Q9H582	1327 aa	Predicted RBP	13.59	□□□□□ -0.23
ACSF2-223	ENST00000513101	MLH3	Q9UHC1	1453 aa		13.57	□□□□□ -0.24
ACSF2-223	ENST00000513101	SAMD9L	Q8IVG5	1584 aa		13.57	□□□□□ -0.24
ACSF2-223	ENST00000513101	MIA2	Q96PC5	1412 aa		13.56	□□□□□ -0.24
ACSF2-223	ENST00000513101	YEATS2	Q9ULM3	1422 aa		13.56	□□□□□ -0.24
ACSF2-223	ENST00000513101	KDM5C	P41229	1560 aa		13.56	□□□□□ -0.24
ACSF2-223	ENST00000513101	MYOM3	Q5VTT5	1437 aa		13.56	□□□□□ -0.24
ACSF2-223	ENST00000513101	MBD5	Q9P267	1494 aa		13.55	□□□□□ -0.24
ACSF2-223	ENST00000513101	ZFYVE16	Q7Z3T8	1539 aa		13.55	□□□□□ -0.24
ACSF2-223	ENST00000513101	MYT1L	Q9UL68	1186 aa		13.55	□□□□□ -0.24
ACSF2-223	ENST00000513101	ITSN2	Q9NZM3	1697 aa		13.55	□□□□□ -0.24
ACSF2-223	ENST00000513101	SPAG9	O60271	1321 aa	Known RBP	13.55	□□□□□ -0.24
ACSF2-223	ENST00000513101	ATP10A	O60312	1499 aa		13.55	□□□□□ -0.24
ACSF2-223	ENST00000513101	ARHGEF40	Q8TER5	1519 aa		13.54	□□□□□ -0.24
ACSF2-223	ENST00000513101	SYCP2	Q9BX26	1530 aa		13.54	□□□□□ -0.24
ACSF2-223	ENST00000513101	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.53	□□□□□ -0.24
ACSF2-223	ENST00000513101	CAMSAP2	Q08AD1	1489 aa		13.51	□□□□□ -0.25
ACSF2-223	ENST00000513101	C9orf84	Q5VXU9	1444 aa		13.51	□□□□□ -0.25
ACSF2-223	ENST00000513101	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.5	□□□□□ -0.25
ACSF2-223	ENST00000513101	TSPY4	P0CV99	314 aa		13.5	□□□□□ -0.25
ACSF2-223	ENST00000513101	TSPY10	P0CW01	314 aa		13.5	□□□□□ -0.25
ACSF2-223	ENST00000513101	HECW2	Q9P2P5	1572 aa		13.49	□□□□□ -0.25
ACSF2-223	ENST00000513101	CCDC141	Q6ZP82	1450 aa		13.48	□□□□□ -0.25
ACSF2-223	ENST00000513101	FGD6	Q6ZV73	1430 aa		13.47	□□□□□ -0.25
ACSF2-223	ENST00000513101	ARHGEF5	Q12774	1597 aa		13.46	□□□□□ -0.25
ACSF2-223	ENST00000513101	RERE	Q9P2R6	1566 aa		13.46	□□□□□ -0.25
ACSF2-223	ENST00000513101	DIP2C	Q9Y2E4	1556 aa		13.46	□□□□□ -0.25
ACSF2-223	ENST00000513101	ATP7A	Q04656	1500 aa		13.45	□□□□□ -0.26
ACSF2-223	ENST00000513101	TCOF1	Q13428	1488 aa	Known RBP	13.45	□□□□□ -0.26
ACSF2-223	ENST00000513101	TRIM26	Q12899	539 aa	Predicted RBP	13.45	□□□□□ -0.26
ACSF2-223	ENST00000513101	KIDINS220	Q9ULH0	1771 aa		13.45	□□□□□ -0.26
ACSF2-223	ENST00000513101	AGL	P35573	1532 aa		13.44	□□□□□ -0.26
ACSF2-223	ENST00000513101	MLEC	Q14165	292 aa		13.43	□□□□□ -0.26
ACSF2-223	ENST00000513101	DHX29	Q7Z478	1369 aa	Known RBP	13.43	□□□□□ -0.26
ACSF2-223	ENST00000513101	ABCA6	Q8N139	1617 aa		13.42	□□□□□ -0.26
ACSF2-223	ENST00000513101	INO80	Q9ULG1	1556 aa	Predicted RBP	13.42	□□□□□ -0.26
ACSF2-223	ENST00000513101	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.42	□□□□□ -0.26
ACSF2-223	ENST00000513101	FBXO41	Q8TF61	875 aa		13.42	□□□□□ -0.26
ACSF2-223	ENST00000513101	A2M	P01023	1474 aa		13.42	□□□□□ -0.26
ACSF2-223	ENST00000513101	ABCC5	O15440	1437 aa		13.41	□□□□□ -0.26
ACSF2-223	ENST00000513101	PTPN23	Q9H3S7	1636 aa		13.41	□□□□□ -0.26
ACSF2-223	ENST00000513101	BCORL1	Q5H9F3	1711 aa		13.41	□□□□□ -0.26
ACSF2-223	ENST00000513101	ADAMTSL3	P82987	1691 aa		13.4	□□□□□ -0.26
ACSF2-223	ENST00000513101	FAM50A	Q14320	339 aa	Known RBP	13.39	□□□□□ -0.27
ACSF2-223	ENST00000513101	PPP6R1	Q9UPN7	881 aa		13.39	□□□□□ -0.27
ACSF2-223	ENST00000513101	SIGLEC1	Q9BZZ2	1709 aa		13.39	□□□□□ -0.27
ACSF2-223	ENST00000513101	DAPK1	P53355	1430 aa		13.39	□□□□□ -0.27
ACSF2-223	ENST00000513101	MAST1	Q9Y2H9	1570 aa		13.38	□□□□□ -0.27
ACSF2-223	ENST00000513101	SHANK2	Q9UPX8	1470 aa		13.38	□□□□□ -0.27
ACSF2-223	ENST00000513101	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.38	□□□□□ -0.27	5e-6	■■■■■ 46.2
ACSF2-223	ENST00000513101	PTPRM	P28827	1452 aa		13.37	□□□□□ -0.27
ACSF2-223	ENST00000513101	PLXNC1	O60486	1568 aa		13.37	□□□□□ -0.27
ACSF2-223	ENST00000513101	ESF1	Q9H501	851 aa	Known RBP	13.36	□□□□□ -0.27
ACSF2-223	ENST00000513101	KIF3B	O15066	747 aa		13.35	□□□□□ -0.27
ACSF2-223	ENST00000513101	GGT6	Q6P531	493 aa		13.35	□□□□□ -0.27
ACSF2-223	ENST00000513101	ANKRD30A	Q9BXX3	1397 aa		13.34	□□□□□ -0.27
ACSF2-223	ENST00000513101	RRBP1	Q9P2E9	1410 aa	Known RBP	13.34	□□□□□ -0.27
ACSF2-223	ENST00000513101	RRP7BP	Q9NSQ0	103 aa		13.34	□□□□□ -0.27
ACSF2-223	ENST00000513101	CHIC2	Q9UKJ5	165 aa		13.34	□□□□□ -0.27
ACSF2-223	ENST00000513101	DNMT1	P26358	1616 aa	Known RBP	13.34	□□□□□ -0.27
ACSF2-223	ENST00000513101	MADD	Q8WXG6	1647 aa		13.34	□□□□□ -0.27
ACSF2-223	ENST00000513101	ADGB	Q8N7X0	1667 aa		13.34	□□□□□ -0.27
ACSF2-223	ENST00000513101	KIF15	Q9NS87	1388 aa		13.33	□□□□□ -0.27
ACSF2-223	ENST00000513101	CNTLN	Q9NXG0	1405 aa		13.33	□□□□□ -0.28
ACSF2-223	ENST00000513101	NCOA1	Q15788	1441 aa		13.32	□□□□□ -0.28
ACSF2-223	ENST00000513101	LMTK3	Q96Q04	1460 aa		13.32	□□□□□ -0.28
ACSF2-223	ENST00000513101	ADGRL2	O95490	1459 aa		13.3	□□□□□ -0.28
ACSF2-223	ENST00000513101	DUOX2	Q9NRD8	1548 aa		13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 11 ms