RNA–Protein interactions for RNA: ENST00000513080.5

SPOP-218, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 4

Gene SPOP, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-218ENST00000513080 SCAPERQ9BY12 1400 aa23.23■■□□□ 1.31
SPOP-218ENST00000513080 MTUS2Q5JR59 1369 aa23.21■■□□□ 1.31
SPOP-218ENST00000513080 PREX2Q70Z35 1606 aa23.21■■□□□ 1.31
SPOP-218ENST00000513080 VPS8Q8N3P4 1428 aa23.2■■□□□ 1.3
SPOP-218ENST00000513080 CDC42BPAQ5VT25 1732 aa23.19■■□□□ 1.3
SPOP-218ENST00000513080 POGZQ7Z3K3 1410 aa23.16■■□□□ 1.3
SPOP-218ENST00000513080 ZMYM4Q5VZL5 1548 aa23.15■■□□□ 1.3
SPOP-218ENST00000513080 EHBP1L1Q8N3D4 1523 aa23.13■■□□□ 1.29
SPOP-218ENST00000513080 GPATCH8Q9UKJ3 1502 aaKnown RBP23.13■■□□□ 1.29
SPOP-218ENST00000513080 ARHGEF40Q8TER5 1519 aa23.13■■□□□ 1.29
SPOP-218ENST00000513080 MAGI2Q86UL8 1455 aa23.11■■□□□ 1.29
SPOP-218ENST00000513080 TIAM1Q13009 1591 aa23.11■■□□□ 1.29
SPOP-218ENST00000513080 CCNB3Q8WWL7 1395 aa23.11■■□□□ 1.29
SPOP-218ENST00000513080 ZFYVE16Q7Z3T8 1539 aa23.1■■□□□ 1.29
SPOP-218ENST00000513080 AFAP1Q8N556 730 aa23.09■■□□□ 1.29
SPOP-218ENST00000513080 ZNF777Q9ULD5 760 aaPredicted RBP23.09■■□□□ 1.29
SPOP-218ENST00000513080 ZNF518AQ6AHZ1 1483 aa23.09■■□□□ 1.29
SPOP-218ENST00000513080 YEATS2Q9ULM3 1422 aa23.08■■□□□ 1.29
SPOP-218ENST00000513080 ABCC1P33527 1531 aa23.08■■□□□ 1.29
SPOP-218ENST00000513080 CFDP1Q9UEE9 299 aaPredicted RBP23.07■■□□□ 1.28
SPOP-218ENST00000513080 ARHGEF12Q9NZN5 1544 aa23.07■■□□□ 1.28
SPOP-218ENST00000513080 ARID4BQ4LE39 1312 aaPredicted RBP23.07■■□□□ 1.28
SPOP-218ENST00000513080 ITSN2Q9NZM3 1697 aa23.06■■□□□ 1.28
SPOP-218ENST00000513080 KDM5CP41229 1560 aa23.05■■□□□ 1.28
SPOP-218ENST00000513080 SAMD9LQ8IVG5 1584 aa23.05■■□□□ 1.28
SPOP-218ENST00000513080 SUPT6HQ7KZ85 1726 aaKnown RBP23.04■■□□□ 1.28
SPOP-218ENST00000513080 TRAPPC8Q9Y2L5 1435 aa23.03■■□□□ 1.28
SPOP-218ENST00000513080 MYT1LQ9UL68 1186 aa23.03■■□□□ 1.28
SPOP-218ENST00000513080 MAP3K1Q13233 1512 aa23.02■■□□□ 1.28
SPOP-218ENST00000513080 NCOA2Q15596 1464 aa23.01■■□□□ 1.27
SPOP-218ENST00000513080 LRRC9Q6ZRR7 1453 aa23.01■■□□□ 1.27
SPOP-218ENST00000513080 BCORL1Q5H9F3 1711 aa23■■□□□ 1.27
SPOP-218ENST00000513080 HECW2Q9P2P5 1572 aa23■■□□□ 1.27
SPOP-218ENST00000513080 ATP10AO60312 1499 aa22.99■■□□□ 1.27
SPOP-218ENST00000513080 HNRNPMP52272 730 aaKnown RBP eCLIP22.99■■□□□ 1.277e-6■■□□□ 11.4
SPOP-218ENST00000513080 ADAMTSL3P82987 1691 aa22.99■■□□□ 1.27
SPOP-218ENST00000513080 SIGLEC1Q9BZZ2 1709 aa22.99■■□□□ 1.27
SPOP-218ENST00000513080 SYCP2Q9BX26 1530 aa22.98■■□□□ 1.27
SPOP-218ENST00000513080 PLEKHH2Q8IVE3 1493 aa22.98■■□□□ 1.27
SPOP-218ENST00000513080 MLH3Q9UHC1 1453 aa22.98■■□□□ 1.27
SPOP-218ENST00000513080 KANK4Q5T7N3 995 aaPredicted RBP22.97■■□□□ 1.27
SPOP-218ENST00000513080 KIAA1107Q9UPP5 1409 aa22.97■■□□□ 1.27
SPOP-218ENST00000513080 APLP2Q06481 763 aa22.96■■□□□ 1.27
SPOP-218ENST00000513080 C9orf84Q5VXU9 1444 aa22.95■■□□□ 1.26
SPOP-218ENST00000513080 ZNF644Q9H582 1327 aaPredicted RBP22.95■■□□□ 1.26
SPOP-218ENST00000513080 DIP2CQ9Y2E4 1556 aa22.93■■□□□ 1.26
SPOP-218ENST00000513080 KIDINS220Q9ULH0 1771 aa22.92■■□□□ 1.26
SPOP-218ENST00000513080 ABCA6Q8N139 1617 aa22.92■■□□□ 1.26
SPOP-218ENST00000513080 MADDQ8WXG6 1647 aa22.92■■□□□ 1.26
SPOP-218ENST00000513080 SPAG9O60271 1321 aaKnown RBP22.9■■□□□ 1.26
SPOP-218ENST00000513080 MLECQ14165 292 aa22.9■■□□□ 1.26
SPOP-218ENST00000513080 PTPRMP28827 1452 aa22.88■■□□□ 1.25
SPOP-218ENST00000513080 REREQ9P2R6 1566 aa22.87■■□□□ 1.25
SPOP-218ENST00000513080 MBD5Q9P267 1494 aa22.86■■□□□ 1.25
SPOP-218ENST00000513080 RIMS1Q86UR5 1692 aaKnown RBP22.86■■□□□ 1.25
SPOP-218ENST00000513080 CAMSAP2Q08AD1 1489 aa22.85■■□□□ 1.25
SPOP-218ENST00000513080 ATP7AQ04656 1500 aa22.84■■□□□ 1.25
SPOP-218ENST00000513080 INO80Q9ULG1 1556 aaPredicted RBP22.83■■□□□ 1.25
SPOP-218ENST00000513080 FER1L4A9Z1Z3 1794 aa22.82■■□□□ 1.24
SPOP-218ENST00000513080 AGLP35573 1532 aa22.8■■□□□ 1.24
SPOP-218ENST00000513080 MYOM3Q5VTT5 1437 aa22.8■■□□□ 1.24
SPOP-218ENST00000513080 RSPH4AQ5TD94 716 aa22.79■■□□□ 1.24
SPOP-218ENST00000513080 CCDC141Q6ZP82 1450 aa22.78■■□□□ 1.24
SPOP-218ENST00000513080 MIA2Q96PC5 1412 aa22.77■■□□□ 1.24
SPOP-218ENST00000513080 PLPPR3Q6T4P5 718 aa22.76■■□□□ 1.23
SPOP-218ENST00000513080 RTEL1-TNFRSF6BF6WH68 1400 aa22.75■■□□□ 1.23
SPOP-218ENST00000513080 ARHGEF5Q12774 1597 aa22.75■■□□□ 1.23
SPOP-218ENST00000513080 A2MP01023 1474 aa22.74■■□□□ 1.23
SPOP-218ENST00000513080 ADGBQ8N7X0 1667 aa22.74■■□□□ 1.23
SPOP-218ENST00000513080 TSPY4P0CV99 314 aa22.71■■□□□ 1.23
SPOP-218ENST00000513080 TSPY10P0CW01 314 aa22.71■■□□□ 1.23
SPOP-218ENST00000513080 PLXNC1O60486 1568 aa22.71■■□□□ 1.23
SPOP-218ENST00000513080 ESF1Q9H501 851 aaKnown RBP22.68■■□□□ 1.22
SPOP-218ENST00000513080 PTPN23Q9H3S7 1636 aa22.68■■□□□ 1.22
SPOP-218ENST00000513080 CEBPAP49715 358 aaPredicted RBP22.66■■□□□ 1.22
SPOP-218ENST00000513080 FGD6Q6ZV73 1430 aa22.65■■□□□ 1.22
SPOP-218ENST00000513080 DHX29Q7Z478 1369 aaKnown RBP22.65■■□□□ 1.22
SPOP-218ENST00000513080 MAST1Q9Y2H9 1570 aa22.63■■□□□ 1.21
SPOP-218ENST00000513080 GGT6Q6P531 493 aa22.63■■□□□ 1.21
SPOP-218ENST00000513080 CNTLNQ9NXG0 1405 aa22.61■■□□□ 1.21
SPOP-218ENST00000513080 C3P01024 1663 aa22.61■■□□□ 1.21
SPOP-218ENST00000513080 TCOF1Q13428 1488 aaKnown RBP22.6■■□□□ 1.21
SPOP-218ENST00000513080 LMTK3Q96Q04 1460 aa22.6■■□□□ 1.21
SPOP-218ENST00000513080 SENP3Q9H4L4 574 aaPredicted RBP22.59■■□□□ 1.21
SPOP-218ENST00000513080 KIF3BO15066 747 aa22.58■■□□□ 1.21
SPOP-218ENST00000513080 ABCC5O15440 1437 aa22.57■■□□□ 1.2
SPOP-218ENST00000513080 CROCC2H7BZ55 1655 aa22.57■■□□□ 1.2
SPOP-218ENST00000513080 CLTCQ00610 1675 aaKnown RBP22.57■■□□□ 1.2
SPOP-218ENST00000513080 MROH2AA6NES4 1674 aa22.56■■□□□ 1.2
SPOP-218ENST00000513080 PPARGC1BQ86YN6 1023 aaKnown RBP22.55■■□□□ 1.2
SPOP-218ENST00000513080 DNMT1P26358 1616 aaKnown RBP22.55■■□□□ 1.2
SPOP-218ENST00000513080 DAPK1P53355 1430 aa22.55■■□□□ 1.2
SPOP-218ENST00000513080 ZMYM3Q14202 1370 aa22.54■■□□□ 1.2
SPOP-218ENST00000513080 PPP6R1Q9UPN7 881 aa22.54■■□□□ 1.2
SPOP-218ENST00000513080 SHANK2Q9UPX8 1470 aa22.54■■□□□ 1.2
SPOP-218ENST00000513080 PREX1Q8TCU6 1659 aa22.53■■□□□ 1.2
SPOP-218ENST00000513080 FAM50AQ14320 339 aaKnown RBP22.52■■□□□ 1.2
SPOP-218ENST00000513080 SETD1BQ9UPS6 1966 aaKnown RBP22.52■■□□□ 1.2
SPOP-218ENST00000513080 HSPA2P54652 639 aa22.5■■□□□ 1.19
SPOP-218ENST00000513080 DUOX2Q9NRD8 1548 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms