RNA–Protein interactions for RNA: ENST00000513044.1

RBM47-210, Transcript of RNA binding motif protein 47, humanhuman

TSL 2

Gene RBM47, Length 2,118 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-210ENST00000513044 HNRNPUL2Q1KMD3 747 aaKnown RBP12.4□□□□□ -0.43
RBM47-210ENST00000513044 TCOF1Q13428 1488 aaKnown RBP12.4□□□□□ -0.43
RBM47-210ENST00000513044 ABCC10Q5T3U5 1492 aa12.4□□□□□ -0.43
RBM47-210ENST00000513044 ZCCHC11Q5TAX3 1644 aaKnown RBP12.39□□□□□ -0.43
RBM47-210ENST00000513044 KIF14Q15058 1648 aa12.37□□□□□ -0.43
RBM47-210ENST00000513044 GPATCH8Q9UKJ3 1502 aaKnown RBP12.36□□□□□ -0.43
RBM47-210ENST00000513044 RIMBP3CA6NJZ7 1639 aa12.34□□□□□ -0.43
RBM47-210ENST00000513044 RIMBP3BA6NNM3 1639 aa12.34□□□□□ -0.43
RBM47-210ENST00000513044 PTPN23Q9H3S7 1636 aa12.34□□□□□ -0.43
RBM47-210ENST00000513044 RIMBP3Q9UFD9 1639 aa12.34□□□□□ -0.43
RBM47-210ENST00000513044 PELP1Q8IZL8 1130 aaKnown RBP12.34□□□□□ -0.43
RBM47-210ENST00000513044 MYCNP04198 464 aaPredicted RBP12.34□□□□□ -0.43
RBM47-210ENST00000513044 ITSN2Q9NZM3 1697 aa12.33□□□□□ -0.44
RBM47-210ENST00000513044 WDR7Q9Y4E6 1490 aa12.31□□□□□ -0.44
RBM47-210ENST00000513044 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.31□□□□□ -0.44
RBM47-210ENST00000513044 PRKCSHP14314 528 aaPredicted RBP12.3□□□□□ -0.44
RBM47-210ENST00000513044 CDC42BPAQ5VT25 1732 aa12.3□□□□□ -0.44
RBM47-210ENST00000513044 FAM50AQ14320 339 aaKnown RBP12.29□□□□□ -0.44
RBM47-210ENST00000513044 ASXL2Q76L83 1435 aa12.29□□□□□ -0.44
RBM47-210ENST00000513044 PREX2Q70Z35 1606 aa12.28□□□□□ -0.44
RBM47-210ENST00000513044 PTPRKQ15262 1439 aa12.28□□□□□ -0.44
RBM47-210ENST00000513044 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
RBM47-210ENST00000513044 CFDP1Q9UEE9 299 aaPredicted RBP12.28□□□□□ -0.44
RBM47-210ENST00000513044 ARAP3Q8WWN8 1544 aa12.28□□□□□ -0.44
RBM47-210ENST00000513044 TTC37Q6PGP7 1564 aa12.27□□□□□ -0.44
RBM47-210ENST00000513044 MAPKBP1O60336 1514 aa12.27□□□□□ -0.45
RBM47-210ENST00000513044 NPM1P06748 294 aaKnown RBP eCLIP12.26□□□□□ -0.45
RBM47-210ENST00000513044 PLCH2O75038 1416 aa12.26□□□□□ -0.45
RBM47-210ENST00000513044 CAMSAP2Q08AD1 1489 aa12.26□□□□□ -0.45
RBM47-210ENST00000513044 HRCP23327 699 aa12.26□□□□□ -0.45
RBM47-210ENST00000513044 AKNAQ7Z591 1439 aa12.26□□□□□ -0.45
RBM47-210ENST00000513044 DNMT1P26358 1616 aaKnown RBP12.25□□□□□ -0.45
RBM47-210ENST00000513044 ABCA9Q8IUA7 1624 aa12.25□□□□□ -0.45
RBM47-210ENST00000513044 CDC42BPBQ9Y5S2 1711 aa12.24□□□□□ -0.45
RBM47-210ENST00000513044 ABCC5O15440 1437 aa12.24□□□□□ -0.45
RBM47-210ENST00000513044 CYB5RLQ6IPT4 315 aa12.24□□□□□ -0.45
RBM47-210ENST00000513044 ZNF644Q9H582 1327 aaPredicted RBP12.24□□□□□ -0.45
RBM47-210ENST00000513044 HFM1A2PYH4 1435 aa12.23□□□□□ -0.45
RBM47-210ENST00000513044 DAPK1P53355 1430 aa12.23□□□□□ -0.45
RBM47-210ENST00000513044 MSH5O43196 834 aa12.23□□□□□ -0.45
RBM47-210ENST00000513044 PLCB2Q00722 1185 aa12.23□□□□□ -0.45
RBM47-210ENST00000513044 ROCK1Q13464 1354 aa12.23□□□□□ -0.45
RBM47-210ENST00000513044 ERICH6Q7L0X2 663 aa12.23□□□□□ -0.45
RBM47-210ENST00000513044 MYO5CQ9NQX4 1742 aa12.23□□□□□ -0.45
RBM47-210ENST00000513044 MBD5Q9P267 1494 aa12.22□□□□□ -0.45
RBM47-210ENST00000513044 SETD5Q9C0A6 1442 aa12.22□□□□□ -0.45
RBM47-210ENST00000513044 KIAA1107Q9UPP5 1409 aa12.22□□□□□ -0.45
RBM47-210ENST00000513044 ARHGEF5Q12774 1597 aa12.22□□□□□ -0.45
RBM47-210ENST00000513044 KCNH8Q96L42 1107 aa12.22□□□□□ -0.45
RBM47-210ENST00000513044 SAMD9LQ8IVG5 1584 aa12.22□□□□□ -0.45
RBM47-210ENST00000513044 ITGAEP38570 1179 aa12.21□□□□□ -0.45
RBM47-210ENST00000513044 PLEKHH2Q8IVE3 1493 aa12.21□□□□□ -0.45
RBM47-210ENST00000513044 RSPH4AQ5TD94 716 aa12.2□□□□□ -0.46
RBM47-210ENST00000513044 SHANK2Q9UPX8 1470 aa12.2□□□□□ -0.46
RBM47-210ENST00000513044 NAIPQ13075 1403 aa12.2□□□□□ -0.46
RBM47-210ENST00000513044 ARHGAP5Q13017 1502 aa12.19□□□□□ -0.46
RBM47-210ENST00000513044 ADGRL2O95490 1459 aa12.19□□□□□ -0.46
RBM47-210ENST00000513044 RAB3GAP2Q9H2M9 1393 aa12.19□□□□□ -0.46
RBM47-210ENST00000513044 CROCC2H7BZ55 1655 aa12.18□□□□□ -0.46
RBM47-210ENST00000513044 EFCAB2Q5VUJ9 269 aa12.18□□□□□ -0.46
RBM47-210ENST00000513044 GLI2P10070 1586 aa12.18□□□□□ -0.46
RBM47-210ENST00000513044 ZNF777Q9ULD5 760 aaPredicted RBP12.16□□□□□ -0.46
RBM47-210ENST00000513044 ABCC1P33527 1531 aa12.16□□□□□ -0.46
RBM47-210ENST00000513044 NCOA1Q15788 1441 aa12.16□□□□□ -0.46
RBM47-210ENST00000513044 GCC2Q8IWJ2 1684 aa12.16□□□□□ -0.46
RBM47-210ENST00000513044 CCDC141Q6ZP82 1450 aa12.16□□□□□ -0.46
RBM47-210ENST00000513044 ARHGEF12Q9NZN5 1544 aa12.15□□□□□ -0.46
RBM47-210ENST00000513044 MAST1Q9Y2H9 1570 aa12.15□□□□□ -0.46
RBM47-210ENST00000513044 ACIN1Q9UKV3 1341 aaKnown RBP12.15□□□□□ -0.46
RBM47-210ENST00000513044 CLSPNQ9HAW4 1339 aa12.14□□□□□ -0.47
RBM47-210ENST00000513044 DHX57Q6P158 1386 aaKnown RBP12.14□□□□□ -0.47
RBM47-210ENST00000513044 SYCP2Q9BX26 1530 aa12.14□□□□□ -0.47
RBM47-210ENST00000513044 ZEB1P37275 1124 aaPredicted RBP12.14□□□□□ -0.47
RBM47-210ENST00000513044 FANCAO15360 1455 aa12.14□□□□□ -0.47
RBM47-210ENST00000513044 CD109Q6YHK3 1445 aa12.13□□□□□ -0.47
RBM47-210ENST00000513044 C9orf84Q5VXU9 1444 aa12.13□□□□□ -0.47
RBM47-210ENST00000513044 HNRNPMP52272 730 aaKnown RBP eCLIP12.13□□□□□ -0.47
RBM47-210ENST00000513044 CCER1Q8TC90 406 aaPredicted RBP12.13□□□□□ -0.47
RBM47-210ENST00000513044 ADGBQ8N7X0 1667 aa12.13□□□□□ -0.47
RBM47-210ENST00000513044 DMRT2Q9Y5R5 561 aa12.12□□□□□ -0.47
RBM47-210ENST00000513044 ANKRD30AQ9BXX3 1397 aa12.12□□□□□ -0.47
RBM47-210ENST00000513044 MAP3K4Q9Y6R4 1608 aa12.12□□□□□ -0.47
RBM47-210ENST00000513044 DIP2BQ9P265 1576 aa12.11□□□□□ -0.47
RBM47-210ENST00000513044 TSPY4P0CV99 314 aa12.11□□□□□ -0.47
RBM47-210ENST00000513044 TSPY10P0CW01 314 aa12.11□□□□□ -0.47
RBM47-210ENST00000513044 CHIC2Q9UKJ5 165 aa12.11□□□□□ -0.47
RBM47-210ENST00000513044 NEO1Q92859 1461 aa12.1□□□□□ -0.47
RBM47-210ENST00000513044 CFAP74Q9C0B2 1584 aa12.1□□□□□ -0.47
RBM47-210ENST00000513044 RRP7BPQ9NSQ0 103 aa12.1□□□□□ -0.47
RBM47-210ENST00000513044 RTEL1-TNFRSF6BF6WH68 1400 aa12.09□□□□□ -0.47
RBM47-210ENST00000513044 TRAPPC8Q9Y2L5 1435 aa12.09□□□□□ -0.47
RBM47-210ENST00000513044 PLXNC1O60486 1568 aa12.08□□□□□ -0.47
RBM47-210ENST00000513044 KDM6BO15054 1643 aa12.08□□□□□ -0.48
RBM47-210ENST00000513044 ADGRL1O94910 1474 aa12.07□□□□□ -0.48
RBM47-210ENST00000513044 ATF5Q9Y2D1 282 aaPredicted RBP12.07□□□□□ -0.48
RBM47-210ENST00000513044 SCAPERQ9BY12 1400 aa12.06□□□□□ -0.48
RBM47-210ENST00000513044 DNAJC5Q9H3Z4 198 aa12.06□□□□□ -0.48
RBM47-210ENST00000513044 ANKRD50Q9ULJ7 1429 aa12.05□□□□□ -0.48
RBM47-210ENST00000513044 KIF15Q9NS87 1388 aa12.05□□□□□ -0.48
RBM47-210ENST00000513044 ZFYVE16Q7Z3T8 1539 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms