RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-238ENST00000512620 MARVELD3Q96A59 401 aa7.81□□□□□ -1.16
CAST-238ENST00000512620 DNAJC5Q9H3Z4 198 aa7.8□□□□□ -1.16
CAST-238ENST00000512620 PDAP1Q13442 181 aaKnown RBP7.79□□□□□ -1.16
CAST-238ENST00000512620 PRKCSHP14314 528 aaPredicted RBP7.77□□□□□ -1.17
CAST-238ENST00000512620 EMP3P54852 163 aa7.77□□□□□ -1.17
CAST-238ENST00000512620 HS3ST6Q96QI5 342 aa7.74□□□□□ -1.17
CAST-238ENST00000512620 KRTAP3-3Q9BYR6 98 aa7.72□□□□□ -1.17
CAST-238ENST00000512620 KRTAP3-2Q9BYR7 98 aa7.72□□□□□ -1.17
CAST-238ENST00000512620 BOLA1Q9Y3E2 137 aa7.72□□□□□ -1.17
CAST-238ENST00000512620 POTEB3A0JP26 581 aa7.71□□□□□ -1.18
CAST-238ENST00000512620 FAM205CA6NFA0 338 aa7.71□□□□□ -1.18
CAST-238ENST00000512620 G3V3G9 751 aa7.71□□□□□ -1.18
CAST-238ENST00000512620 DPY19L2Q6NUT2 758 aa7.71□□□□□ -1.18
CAST-238ENST00000512620 POTEBQ6S5H4 581 aa7.71□□□□□ -1.18
CAST-238ENST00000512620 CABP2Q9NPB3 220 aa7.71□□□□□ -1.18
CAST-238ENST00000512620 HOXB3P14651 431 aaPredicted RBP7.69□□□□□ -1.18
CAST-238ENST00000512620 HOXB1P14653 301 aaPredicted RBP7.68□□□□□ -1.18
CAST-238ENST00000512620 TPRNQ4KMQ1 711 aa7.66□□□□□ -1.18
CAST-238ENST00000512620 CADPS2Q86UW7 1296 aa7.66□□□□□ -1.18
CAST-238ENST00000512620 MFRPQ9BY79 579 aa7.66□□□□□ -1.18
CAST-238ENST00000512620 DOK7Q18PE1 504 aa7.65□□□□□ -1.18
CAST-238ENST00000512620 EFCAB3Q8N7B9 438 aa7.65□□□□□ -1.18
CAST-238ENST00000512620 NBR1Q14596 966 aa7.64□□□□□ -1.19
CAST-238ENST00000512620 ZNF710Q8N1W2 664 aa7.64□□□□□ -1.19
CAST-238ENST00000512620 RYDENQ9NUL5 291 aaKnown RBP7.64□□□□□ -1.19
CAST-238ENST00000512620 PPP1R37O75864 691 aa7.62□□□□□ -1.19
CAST-238ENST00000512620 PHF8Q9UPP1 1060 aa7.62□□□□□ -1.19
CAST-238ENST00000512620 RIMBP2O15034 1052 aa7.61□□□□□ -1.19
CAST-238ENST00000512620 ZSWIM6Q9HCJ5 1215 aa7.61□□□□□ -1.19
CAST-238ENST00000512620 ERBB3P21860 1342 aa7.6□□□□□ -1.19
CAST-238ENST00000512620 SOX12O15370 315 aa7.59□□□□□ -1.19
CAST-238ENST00000512620 FBXO22Q8NEZ5 403 aa7.57□□□□□ -1.2
CAST-238ENST00000512620 MICALL2Q8IY33 904 aa7.56□□□□□ -1.2
CAST-238ENST00000512620 NLRP6P59044 892 aa7.55□□□□□ -1.2
CAST-238ENST00000512620 ZNF687Q8N1G0 1237 aa7.55□□□□□ -1.2
CAST-238ENST00000512620 WDR70Q9NW82 654 aa7.54□□□□□ -1.2
CAST-238ENST00000512620 VARS2Q5ST30 1063 aaKnown RBP7.53□□□□□ -1.2
CAST-238ENST00000512620 GPR153Q6NV75 609 aa7.53□□□□□ -1.2
CAST-238ENST00000512620 TMEM92Q6UXU6 159 aa7.53□□□□□ -1.2
CAST-238ENST00000512620 KCNV2Q8TDN2 545 aa7.53□□□□□ -1.2
CAST-238ENST00000512620 MS4A4AQ96JQ5 239 aa7.53□□□□□ -1.2
CAST-238ENST00000512620 RNF166Q96A37 237 aaPredicted RBP7.52□□□□□ -1.21
CAST-238ENST00000512620 PTGER2P43116 358 aa7.51□□□□□ -1.21
CAST-238ENST00000512620 MYT1LQ9UL68 1186 aa7.49□□□□□ -1.21
CAST-238ENST00000512620 P3H3Q8IVL6 736 aa7.47□□□□□ -1.21
CAST-238ENST00000512620 NCKAP5LQ9HCH0 1330 aa7.46□□□□□ -1.22
CAST-238ENST00000512620 LARP6Q9BRS8 491 aaKnown RBP7.45□□□□□ -1.22
CAST-238ENST00000512620 ZNF316A6NFI3 1004 aaPredicted RBP7.43□□□□□ -1.22
CAST-238ENST00000512620 ARSIQ5FYB1 569 aa7.43□□□□□ -1.22
CAST-238ENST00000512620 E2F4Q16254 413 aa7.42□□□□□ -1.22
CAST-238ENST00000512620 KIF3CO14782 793 aa7.39□□□□□ -1.23
CAST-238ENST00000512620 PDE4AP27815 886 aa7.39□□□□□ -1.23
CAST-238ENST00000512620 SEMA3EO15041 775 aa7.38□□□□□ -1.23
CAST-238ENST00000512620 PBX2P40425 430 aa7.38□□□□□ -1.23
CAST-238ENST00000512620 ANKRD13DQ6ZTN6 518 aa7.38□□□□□ -1.23
CAST-238ENST00000512620 DDX27Q96GQ7 796 aaKnown RBP7.38□□□□□ -1.23
CAST-238ENST00000512620 CRISPLD2Q9H0B8 497 aa7.38□□□□□ -1.23
CAST-238ENST00000512620 SLC34A2O95436 690 aa7.37□□□□□ -1.23
CAST-238ENST00000512620 LSM11P83369 360 aaKnown RBP eCLIP7.37□□□□□ -1.23
CAST-238ENST00000512620 LMOD2Q6P5Q4 547 aa7.37□□□□□ -1.23
CAST-238ENST00000512620 ARHGEF1Q92888 912 aaKnown RBP7.36□□□□□ -1.23
CAST-238ENST00000512620 MFSD10Q14728 455 aa7.35□□□□□ -1.23
CAST-238ENST00000512620 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.35□□□□□ -1.23
CAST-238ENST00000512620 KHSRPQ92945 711 aaKnown RBP eCLIP7.35□□□□□ -1.23
CAST-238ENST00000512620 C2orf72A6NCS6 295 aa7.34□□□□□ -1.23
CAST-238ENST00000512620 PPP1R15BQ5SWA1 713 aa7.32□□□□□ -1.24
CAST-238ENST00000512620 NUDT7P0C024 238 aa7.31□□□□□ -1.24
CAST-238ENST00000512620 GPHNQ9NQX3 736 aaPredicted RBP7.31□□□□□ -1.24
CAST-238ENST00000512620 TESPA1A2RU30 521 aaPredicted RBP7.3□□□□□ -1.24
CAST-238ENST00000512620 PSDA5PKW4 1024 aaPredicted RBP7.3□□□□□ -1.24
CAST-238ENST00000512620 DSG2Q14126 1118 aa7.3□□□□□ -1.24
CAST-238ENST00000512620 LHX6Q9UPM6 363 aa7.3□□□□□ -1.24
CAST-238ENST00000512620 PCDHGA4Q9Y5G9 962 aa7.3□□□□□ -1.24
CAST-238ENST00000512620 CAMK2BQ13554 666 aa7.29□□□□□ -1.24
CAST-238ENST00000512620 POTEEQ6S8J3 1075 aa7.29□□□□□ -1.24
CAST-238ENST00000512620 TULP1O00294 542 aaPredicted RBP7.28□□□□□ -1.24
CAST-238ENST00000512620 TMC2Q8TDI7 906 aa7.28□□□□□ -1.24
CAST-238ENST00000512620 HCSTQ9UBK5 93 aa7.28□□□□□ -1.24
CAST-238ENST00000512620 DPYSL4O14531 572 aa7.27□□□□□ -1.25
CAST-238ENST00000512620 MLLT3P42568 568 aaPredicted RBP7.27□□□□□ -1.25
CAST-238ENST00000512620 EMILIN3Q9NT22 766 aa7.27□□□□□ -1.25
CAST-238ENST00000512620 ARHGAP33O14559 1287 aa7.26□□□□□ -1.25
CAST-238ENST00000512620 ZC3H15Q8WU90 426 aaKnown RBP7.26□□□□□ -1.25
CAST-238ENST00000512620 AXIN2Q9Y2T1 843 aa7.25□□□□□ -1.25
CAST-238ENST00000512620 KDM4FA0A1W2PPD8 638 aa7.24□□□□□ -1.25
CAST-238ENST00000512620 TK2O00142 265 aa7.24□□□□□ -1.25
CAST-238ENST00000512620 ADGRD1Q6QNK2 874 aa7.24□□□□□ -1.25
CAST-238ENST00000512620 PLPP6Q8IY26 295 aa7.24□□□□□ -1.25
CAST-238ENST00000512620 PTCD2Q8WV60 388 aaKnown RBP7.24□□□□□ -1.25
CAST-238ENST00000512620 RBM26Q5T8P6 1007 aaKnown RBP7.23□□□□□ -1.25
CAST-238ENST00000512620 PLA2G2EQ9NZK7 142 aa7.23□□□□□ -1.25
CAST-238ENST00000512620 FOXK1P85037 733 aa7.22□□□□□ -1.25
CAST-238ENST00000512620 UPF1Q92900 1129 aaKnown RBP eCLIP7.22□□□□□ -1.25
CAST-238ENST00000512620 ARIH1Q9Y4X5 557 aaPredicted RBP7.22□□□□□ -1.25
CAST-238ENST00000512620 SLC24A3Q9HC58 644 aa7.21□□□□□ -1.26
CAST-238ENST00000512620 HRO43593 1189 aa7.2□□□□□ -1.26
CAST-238ENST00000512620 SMYD5Q6GMV2 418 aa7.2□□□□□ -1.26
CAST-238ENST00000512620 TBC1D12O60347 775 aa7.17□□□□□ -1.26
CAST-238ENST00000512620 PDIA6Q15084 440 aa7.17□□□□□ -1.26
CAST-238ENST00000512620 GRXCR2A6NFK2 248 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms