RNA–Protein interactions for RNA: ENST00000512517.1

LINC01258-201, Transcript of long intergenic non-protein coding RNA 1258, humanhuman

TSL 2 BASIC

Gene LINC01258, Length 2,059 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01258-201ENST00000512517 BCANQ96GW7 911 aa12.35□□□□□ -0.43
LINC01258-201ENST00000512517 CCNB3Q8WWL7 1395 aa12.35□□□□□ -0.43
LINC01258-201ENST00000512517 CDK11AQ9UQ88 783 aaPredicted RBP12.34□□□□□ -0.43
LINC01258-201ENST00000512517 NCOA2Q15596 1464 aa12.34□□□□□ -0.43
LINC01258-201ENST00000512517 FAM50AQ14320 339 aaKnown RBP12.34□□□□□ -0.43
LINC01258-201ENST00000512517 RRBP1Q9P2E9 1410 aaKnown RBP12.34□□□□□ -0.43
LINC01258-201ENST00000512517 UACAQ9BZF9 1416 aa12.33□□□□□ -0.44
LINC01258-201ENST00000512517 IL27Q8NEV9 243 aa12.32□□□□□ -0.44
LINC01258-201ENST00000512517 ATP10BO94823 1461 aa12.3□□□□□ -0.44
LINC01258-201ENST00000512517 PLEKHD1A6NEE1 506 aa12.29□□□□□ -0.44
LINC01258-201ENST00000512517 RTL5Q5HYW3 569 aaPredicted RBP12.29□□□□□ -0.44
LINC01258-201ENST00000512517 ABCC2Q92887 1545 aa12.28□□□□□ -0.44
LINC01258-201ENST00000512517 FGD6Q6ZV73 1430 aa12.28□□□□□ -0.44
LINC01258-201ENST00000512517 C11orf95C9JLR9 678 aaPredicted RBP12.28□□□□□ -0.44
LINC01258-201ENST00000512517 TROQ12816 1431 aaPredicted RBP12.28□□□□□ -0.44
LINC01258-201ENST00000512517 MYOM3Q5VTT5 1437 aa12.28□□□□□ -0.44
LINC01258-201ENST00000512517 KIF14Q15058 1648 aa12.27□□□□□ -0.45
LINC01258-201ENST00000512517 NOP58Q9Y2X3 529 aaKnown RBP12.26□□□□□ -0.45
LINC01258-201ENST00000512517 AEBP2Q6ZN18 517 aaPredicted RBP12.26□□□□□ -0.45
LINC01258-201ENST00000512517 RSPH6AQ9H0K4 717 aa12.26□□□□□ -0.45
LINC01258-201ENST00000512517 ARHGEF11O15085 1522 aa12.26□□□□□ -0.45
LINC01258-201ENST00000512517 PTPN23Q9H3S7 1636 aa12.24□□□□□ -0.45
LINC01258-201ENST00000512517 ZCCHC11Q5TAX3 1644 aaKnown RBP12.24□□□□□ -0.45
LINC01258-201ENST00000512517 ADCY10Q96PN6 1610 aa12.23□□□□□ -0.45
LINC01258-201ENST00000512517 RTN4Q9NQC3 1192 aaKnown RBP12.23□□□□□ -0.45
LINC01258-201ENST00000512517 UHRF1BP1LA0JNW5 1464 aa12.21□□□□□ -0.45
LINC01258-201ENST00000512517 ITSN2Q9NZM3 1697 aa12.21□□□□□ -0.46
LINC01258-201ENST00000512517 KCNH8Q96L42 1107 aa12.2□□□□□ -0.46
LINC01258-201ENST00000512517 ZMYND15Q9H091 742 aa12.2□□□□□ -0.46
LINC01258-201ENST00000512517 ZNF777Q9ULD5 760 aaPredicted RBP12.2□□□□□ -0.46
LINC01258-201ENST00000512517 CDC42BPAQ5VT25 1732 aa12.19□□□□□ -0.46
LINC01258-201ENST00000512517 KDM5BQ9UGL1 1544 aa12.19□□□□□ -0.46
LINC01258-201ENST00000512517 NBR1Q14596 966 aa12.18□□□□□ -0.46
LINC01258-201ENST00000512517 CFDP1Q9UEE9 299 aaPredicted RBP12.18□□□□□ -0.46
LINC01258-201ENST00000512517 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC01258-201ENST00000512517 MIA2Q96PC5 1412 aa12.18□□□□□ -0.46
LINC01258-201ENST00000512517 GPATCH8Q9UKJ3 1502 aaKnown RBP12.17□□□□□ -0.46
LINC01258-201ENST00000512517 ZNF644Q9H582 1327 aaPredicted RBP12.16□□□□□ -0.46
LINC01258-201ENST00000512517 NPM1P06748 294 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC01258-201ENST00000512517 TCOF1Q13428 1488 aaKnown RBP12.15□□□□□ -0.46
LINC01258-201ENST00000512517 ABCC10Q5T3U5 1492 aa12.15□□□□□ -0.46
LINC01258-201ENST00000512517 WASHC2AQ641Q2 1341 aa12.15□□□□□ -0.46
LINC01258-201ENST00000512517 CHIC2Q9UKJ5 165 aa12.15□□□□□ -0.46
LINC01258-201ENST00000512517 WASHC2CQ9Y4E1 1318 aa12.14□□□□□ -0.47
LINC01258-201ENST00000512517 RIMBP3CA6NJZ7 1639 aa12.14□□□□□ -0.47
LINC01258-201ENST00000512517 RIMBP3BA6NNM3 1639 aa12.14□□□□□ -0.47
LINC01258-201ENST00000512517 RIMBP3Q9UFD9 1639 aa12.14□□□□□ -0.47
LINC01258-201ENST00000512517 TTC37Q6PGP7 1564 aa12.14□□□□□ -0.47
LINC01258-201ENST00000512517 CYB5RLQ6IPT4 315 aa12.14□□□□□ -0.47
LINC01258-201ENST00000512517 CAMSAP2Q08AD1 1489 aa12.13□□□□□ -0.47
LINC01258-201ENST00000512517 PTPRKQ15262 1439 aa12.13□□□□□ -0.47
LINC01258-201ENST00000512517 MYO5CQ9NQX4 1742 aa12.13□□□□□ -0.47
LINC01258-201ENST00000512517 CDC42BPBQ9Y5S2 1711 aa12.13□□□□□ -0.47
LINC01258-201ENST00000512517 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.12□□□□□ -0.47
LINC01258-201ENST00000512517 USP35Q9P2H5 1018 aa12.12□□□□□ -0.47
LINC01258-201ENST00000512517 RAB3GAP2Q9H2M9 1393 aa12.12□□□□□ -0.47
LINC01258-201ENST00000512517 SETD5Q9C0A6 1442 aa12.12□□□□□ -0.47
LINC01258-201ENST00000512517 PREX2Q70Z35 1606 aa12.12□□□□□ -0.47
LINC01258-201ENST00000512517 VSIG10Q8N0Z9 540 aa12.11□□□□□ -0.47
LINC01258-201ENST00000512517 PDE4CQ08493 712 aa12.1□□□□□ -0.47
LINC01258-201ENST00000512517 WDR7Q9Y4E6 1490 aa12.1□□□□□ -0.47
LINC01258-201ENST00000512517 ARHGAP5Q13017 1502 aa12.1□□□□□ -0.47
LINC01258-201ENST00000512517 RRP7BPQ9NSQ0 103 aa12.1□□□□□ -0.47
LINC01258-201ENST00000512517 DNMT1P26358 1616 aaKnown RBP12.1□□□□□ -0.47
LINC01258-201ENST00000512517 ASXL2Q76L83 1435 aa12.1□□□□□ -0.47
LINC01258-201ENST00000512517 DAPK1P53355 1430 aa12.09□□□□□ -0.47
LINC01258-201ENST00000512517 FGD1P98174 961 aa12.08□□□□□ -0.48
LINC01258-201ENST00000512517 ABCC5O15440 1437 aa12.07□□□□□ -0.48
LINC01258-201ENST00000512517 HFM1A2PYH4 1435 aa12.06□□□□□ -0.48
LINC01258-201ENST00000512517 SAMD9LQ8IVG5 1584 aa12.06□□□□□ -0.48
LINC01258-201ENST00000512517 HNRNPMP52272 730 aaKnown RBP eCLIP12.06□□□□□ -0.48
LINC01258-201ENST00000512517 CROCC2H7BZ55 1655 aa12.05□□□□□ -0.48
LINC01258-201ENST00000512517 PDIA4P13667 645 aaKnown RBP12.05□□□□□ -0.48
LINC01258-201ENST00000512517 DHX57Q6P158 1386 aaKnown RBP12.04□□□□□ -0.48
LINC01258-201ENST00000512517 GCC2Q8IWJ2 1684 aa12.04□□□□□ -0.48
LINC01258-201ENST00000512517 PAK3O75914 559 aaPredicted RBP12.04□□□□□ -0.48
LINC01258-201ENST00000512517 NAIPQ13075 1403 aa12.04□□□□□ -0.48
LINC01258-201ENST00000512517 AAMPQ13685 434 aa12.04□□□□□ -0.48
LINC01258-201ENST00000512517 ADGBQ8N7X0 1667 aa12.03□□□□□ -0.48
LINC01258-201ENST00000512517 SYCP2Q9BX26 1530 aa12.03□□□□□ -0.48
LINC01258-201ENST00000512517 PLCH2O75038 1416 aa12.03□□□□□ -0.48
LINC01258-201ENST00000512517 FAM43AQ8N2R8 423 aa12.02□□□□□ -0.48
LINC01258-201ENST00000512517 ABCA9Q8IUA7 1624 aa12.02□□□□□ -0.48
LINC01258-201ENST00000512517 TSPY4P0CV99 314 aa12.02□□□□□ -0.49
LINC01258-201ENST00000512517 TSPY10P0CW01 314 aa12.02□□□□□ -0.49
LINC01258-201ENST00000512517 EFCAB2Q5VUJ9 269 aa12.02□□□□□ -0.49
LINC01258-201ENST00000512517 IPO9Q96P70 1041 aaKnown RBP12.02□□□□□ -0.49
LINC01258-201ENST00000512517 ANP32AP39687 249 aaKnown RBP12.01□□□□□ -0.49
LINC01258-201ENST00000512517 AKNAQ7Z591 1439 aa12.01□□□□□ -0.49
LINC01258-201ENST00000512517 TIMELESSQ9UNS1 1208 aa12.01□□□□□ -0.49
LINC01258-201ENST00000512517 KDM6BO15054 1643 aa12□□□□□ -0.49
LINC01258-201ENST00000512517 C9orf84Q5VXU9 1444 aa12□□□□□ -0.49
LINC01258-201ENST00000512517 RBM10P98175 930 aaKnown RBP11.99□□□□□ -0.49
LINC01258-201ENST00000512517 TRIM52Q96A61 297 aa11.99□□□□□ -0.49
LINC01258-201ENST00000512517 ZBTB47Q9UFB7 747 aaPredicted RBP11.99□□□□□ -0.49
LINC01258-201ENST00000512517 ROCK1Q13464 1354 aa11.99□□□□□ -0.49
LINC01258-201ENST00000512517 CCDC141Q6ZP82 1450 aa11.99□□□□□ -0.49
LINC01258-201ENST00000512517 ARHGEF5Q12774 1597 aa11.99□□□□□ -0.49
LINC01258-201ENST00000512517 RRP9O43818 475 aaKnown RBP11.99□□□□□ -0.49
LINC01258-201ENST00000512517 ANKRD30AQ9BXX3 1397 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms