RNA–Protein interactions for RNA: ENST00000511988.5

SUB1-210, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-210ENST00000511988 NCOA2Q15596 1464 aa15.74■□□□□ 0.11
SUB1-210ENST00000511988 PLEKHD1A6NEE1 506 aa15.74■□□□□ 0.11
SUB1-210ENST00000511988 MAP3K4Q9Y6R4 1608 aa15.73■□□□□ 0.11
SUB1-210ENST00000511988 HSPA2P54652 639 aa15.71■□□□□ 0.11
SUB1-210ENST00000511988 ABCA9Q8IUA7 1624 aa15.69■□□□□ 0.1
SUB1-210ENST00000511988 TTC37Q6PGP7 1564 aa15.69■□□□□ 0.1
SUB1-210ENST00000511988 MYO5CQ9NQX4 1742 aa15.68■□□□□ 0.1
SUB1-210ENST00000511988 PPARGC1BQ86YN6 1023 aaKnown RBP15.68■□□□□ 0.1
SUB1-210ENST00000511988 CDC42BPAQ5VT25 1732 aa15.68■□□□□ 0.1
SUB1-210ENST00000511988 PREX2Q70Z35 1606 aa15.68■□□□□ 0.1
SUB1-210ENST00000511988 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.68■□□□□ 0.11e-8■■□□□ 11.6
SUB1-210ENST00000511988 MYOM3Q5VTT5 1437 aa15.67■□□□□ 0.1
SUB1-210ENST00000511988 PHLDB1Q86UU1 1377 aa15.66■□□□□ 0.1
SUB1-210ENST00000511988 CCNB3Q8WWL7 1395 aa15.64■□□□□ 0.09
SUB1-210ENST00000511988 ARAP3Q8WWN8 1544 aa15.64■□□□□ 0.09
SUB1-210ENST00000511988 FGD6Q6ZV73 1430 aa15.63■□□□□ 0.09
SUB1-210ENST00000511988 MIA2Q96PC5 1412 aa15.63■□□□□ 0.09
SUB1-210ENST00000511988 RRBP1Q9P2E9 1410 aaKnown RBP15.63■□□□□ 0.09
SUB1-210ENST00000511988 ADAMTSL3P82987 1691 aa15.63■□□□□ 0.09
SUB1-210ENST00000511988 GPATCH8Q9UKJ3 1502 aaKnown RBP15.62■□□□□ 0.09
SUB1-210ENST00000511988 PTPN23Q9H3S7 1636 aa15.61■□□□□ 0.09
SUB1-210ENST00000511988 CDC42BPBQ9Y5S2 1711 aa15.6■□□□□ 0.09
SUB1-210ENST00000511988 CFAP74Q9C0B2 1584 aa15.59■□□□□ 0.09
SUB1-210ENST00000511988 FOXD1Q16676 465 aa15.59■□□□□ 0.09
SUB1-210ENST00000511988 TCOF1Q13428 1488 aaKnown RBP15.59■□□□□ 0.09
SUB1-210ENST00000511988 ARHGAP5Q13017 1502 aa15.58■□□□□ 0.08
SUB1-210ENST00000511988 KCNH8Q96L42 1107 aa15.57■□□□□ 0.08
SUB1-210ENST00000511988 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.57■□□□□ 0.08
SUB1-210ENST00000511988 PLPPR3Q6T4P5 718 aa15.56■□□□□ 0.08
SUB1-210ENST00000511988 PLCH2O75038 1416 aa15.56■□□□□ 0.08
SUB1-210ENST00000511988 MADDQ8WXG6 1647 aa15.56■□□□□ 0.08
SUB1-210ENST00000511988 CAMSAP2Q08AD1 1489 aa15.55■□□□□ 0.08
SUB1-210ENST00000511988 TRIM26Q12899 539 aaPredicted RBP15.55■□□□□ 0.08
SUB1-210ENST00000511988 SAMD9LQ8IVG5 1584 aa15.53■□□□□ 0.08
SUB1-210ENST00000511988 PLEKHH2Q8IVE3 1493 aa15.53■□□□□ 0.08
SUB1-210ENST00000511988 CD109Q6YHK3 1445 aa15.53■□□□□ 0.08
SUB1-210ENST00000511988 ARID4BQ4LE39 1312 aaPredicted RBP15.52■□□□□ 0.08
SUB1-210ENST00000511988 CFDP1Q9UEE9 299 aaPredicted RBP15.52■□□□□ 0.08
SUB1-210ENST00000511988 ABCC1P33527 1531 aa15.51■□□□□ 0.07
SUB1-210ENST00000511988 FANCAO15360 1455 aa15.51■□□□□ 0.07
SUB1-210ENST00000511988 CROCC2H7BZ55 1655 aa15.51■□□□□ 0.07
SUB1-210ENST00000511988 DNMT1P26358 1616 aaKnown RBP15.5■□□□□ 0.07
SUB1-210ENST00000511988 ARHGEF5Q12774 1597 aa15.49■□□□□ 0.07
SUB1-210ENST00000511988 BCORL1Q5H9F3 1711 aa15.48■□□□□ 0.07
SUB1-210ENST00000511988 NEO1Q92859 1461 aa15.48■□□□□ 0.07
SUB1-210ENST00000511988 SYCP2Q9BX26 1530 aa15.48■□□□□ 0.07
SUB1-210ENST00000511988 EFCAB2Q5VUJ9 269 aa15.47■□□□□ 0.07
SUB1-210ENST00000511988 KIAA1107Q9UPP5 1409 aa15.47■□□□□ 0.07
SUB1-210ENST00000511988 FAM50AQ14320 339 aaKnown RBP15.46■□□□□ 0.07
SUB1-210ENST00000511988 RIMS1Q86UR5 1692 aaKnown RBP15.46■□□□□ 0.07
SUB1-210ENST00000511988 SHANK2Q9UPX8 1470 aa15.45■□□□□ 0.06
SUB1-210ENST00000511988 ADGBQ8N7X0 1667 aa15.44■□□□□ 0.06
SUB1-210ENST00000511988 CCDC141Q6ZP82 1450 aa15.44■□□□□ 0.06
SUB1-210ENST00000511988 DAPK1P53355 1430 aa15.43■□□□□ 0.06
SUB1-210ENST00000511988 MBD5Q9P267 1494 aa15.42■□□□□ 0.06
SUB1-210ENST00000511988 ZNF777Q9ULD5 760 aaPredicted RBP15.42■□□□□ 0.06
SUB1-210ENST00000511988 AKNAQ7Z591 1439 aa15.42■□□□□ 0.06
SUB1-210ENST00000511988 ZNF644Q9H582 1327 aaPredicted RBP15.42■□□□□ 0.06
SUB1-210ENST00000511988 MAST1Q9Y2H9 1570 aa15.41■□□□□ 0.06
SUB1-210ENST00000511988 ABCC5O15440 1437 aa15.4■□□□□ 0.06
SUB1-210ENST00000511988 ARHGEF12Q9NZN5 1544 aa15.39■□□□□ 0.05
SUB1-210ENST00000511988 RAPGEF3O95398 923 aa15.39■□□□□ 0.05
SUB1-210ENST00000511988 RSPH4AQ5TD94 716 aa15.38■□□□□ 0.05
SUB1-210ENST00000511988 ZNF518AQ6AHZ1 1483 aa15.38■□□□□ 0.05
SUB1-210ENST00000511988 GCC2Q8IWJ2 1684 aa15.38■□□□□ 0.05
SUB1-210ENST00000511988 RICTORQ6R327 1708 aa15.37■□□□□ 0.05
SUB1-210ENST00000511988 KDM5CP41229 1560 aa15.37■□□□□ 0.05
SUB1-210ENST00000511988 POGZQ7Z3K3 1410 aa15.37■□□□□ 0.05
SUB1-210ENST00000511988 PCGF6Q9BYE7 350 aa15.37■□□□□ 0.05
SUB1-210ENST00000511988 ADGRL2O95490 1459 aa15.37■□□□□ 0.05
SUB1-210ENST00000511988 PLXNC1O60486 1568 aa15.36■□□□□ 0.05
SUB1-210ENST00000511988 INO80Q9ULG1 1556 aaPredicted RBP15.36■□□□□ 0.05
SUB1-210ENST00000511988 C9orf84Q5VXU9 1444 aa15.36■□□□□ 0.05
SUB1-210ENST00000511988 SCAPERQ9BY12 1400 aa15.36■□□□□ 0.05
SUB1-210ENST00000511988 DMRT2Q9Y5R5 561 aa15.36■□□□□ 0.05
SUB1-210ENST00000511988 ROCK1Q13464 1354 aa15.36■□□□□ 0.05
SUB1-210ENST00000511988 PTPRKQ15262 1439 aa15.35■□□□□ 0.05
SUB1-210ENST00000511988 YEATS2Q9ULM3 1422 aa15.35■□□□□ 0.05
SUB1-210ENST00000511988 DENND4BO75064 1496 aaPredicted RBP15.35■□□□□ 0.05
SUB1-210ENST00000511988 ZFYVE16Q7Z3T8 1539 aa15.35■□□□□ 0.05
SUB1-210ENST00000511988 TRAPPC8Q9Y2L5 1435 aa15.34■□□□□ 0.05
SUB1-210ENST00000511988 ZMYM4Q5VZL5 1548 aa15.33■□□□□ 0.05
SUB1-210ENST00000511988 FRMPD1Q5SYB0 1578 aa15.33■□□□□ 0.05
SUB1-210ENST00000511988 ITGAEP38570 1179 aa15.33■□□□□ 0.04
SUB1-210ENST00000511988 HNRNPMP52272 730 aaKnown RBP eCLIP15.33■□□□□ 0.04
SUB1-210ENST00000511988 HFM1A2PYH4 1435 aa15.33■□□□□ 0.04
SUB1-210ENST00000511988 ATP7AQ04656 1500 aa15.33■□□□□ 0.04
SUB1-210ENST00000511988 RTEL1-TNFRSF6BF6WH68 1400 aa15.31■□□□□ 0.04
SUB1-210ENST00000511988 TSPY4P0CV99 314 aa15.3■□□□□ 0.04
SUB1-210ENST00000511988 TSPY10P0CW01 314 aa15.3■□□□□ 0.04
SUB1-210ENST00000511988 ANKRD30AQ9BXX3 1397 aa15.3■□□□□ 0.04
SUB1-210ENST00000511988 MLH3Q9UHC1 1453 aa15.29■□□□□ 0.04
SUB1-210ENST00000511988 KIDINS220Q9ULH0 1771 aa15.29■□□□□ 0.04
SUB1-210ENST00000511988 NCOA1Q15788 1441 aa15.28■□□□□ 0.04
SUB1-210ENST00000511988 NAIPQ13075 1403 aa15.27■□□□□ 0.04
SUB1-210ENST00000511988 STRCQ7RTU9 1775 aa15.27■□□□□ 0.04
SUB1-210ENST00000511988 SPAG9O60271 1321 aaKnown RBP15.27■□□□□ 0.04
SUB1-210ENST00000511988 LTBP4Q8N2S1 1624 aa15.27■□□□□ 0.03
SUB1-210ENST00000511988 MED1Q15648 1581 aaPredicted RBP15.27■□□□□ 0.03
SUB1-210ENST00000511988 IQSEC2Q5JU85 1478 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms