RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 ARHGAP35Q9NRY4 1499 aa9.63□□□□□ -0.87
RNF4-217ENST00000511892 CDK13Q14004 1512 aaKnown RBP9.61□□□□□ -0.87
RNF4-217ENST00000511892 ARAP3Q8WWN8 1544 aa9.6□□□□□ -0.87
RNF4-217ENST00000511892 POLA2Q14181 598 aa9.59□□□□□ -0.87
RNF4-217ENST00000511892 HECW1Q76N89 1606 aa9.59□□□□□ -0.87
RNF4-217ENST00000511892 TTC37Q6PGP7 1564 aa9.58□□□□□ -0.88
RNF4-217ENST00000511892 FMN1Q68DA7 1419 aa9.58□□□□□ -0.88
RNF4-217ENST00000511892 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.58□□□□□ -0.88
RNF4-217ENST00000511892 PLEKHD1A6NEE1 506 aa9.57□□□□□ -0.88
RNF4-217ENST00000511892 ADGRL1O94910 1474 aa9.57□□□□□ -0.88
RNF4-217ENST00000511892 NEO1Q92859 1461 aa9.57□□□□□ -0.88
RNF4-217ENST00000511892 FRMPD1Q5SYB0 1578 aa9.57□□□□□ -0.88
RNF4-217ENST00000511892 RICTORQ6R327 1708 aa9.56□□□□□ -0.88
RNF4-217ENST00000511892 PHLDB1Q86UU1 1377 aa9.55□□□□□ -0.88
RNF4-217ENST00000511892 KIF14Q15058 1648 aa9.55□□□□□ -0.88
RNF4-217ENST00000511892 CFAP74Q9C0B2 1584 aa9.54□□□□□ -0.88
RNF4-217ENST00000511892 MYO5CQ9NQX4 1742 aa9.54□□□□□ -0.88
RNF4-217ENST00000511892 PCF11O94913 1555 aaKnown RBP9.54□□□□□ -0.88
RNF4-217ENST00000511892 RAPGEF3O95398 923 aa9.53□□□□□ -0.88
RNF4-217ENST00000511892 MYCNP04198 464 aaPredicted RBP9.53□□□□□ -0.88
RNF4-217ENST00000511892 ATP1B4Q9UN42 357 aaPredicted RBP9.53□□□□□ -0.88
RNF4-217ENST00000511892 FANCAO15360 1455 aa9.52□□□□□ -0.89
RNF4-217ENST00000511892 AKNAQ7Z591 1439 aa9.51□□□□□ -0.89
RNF4-217ENST00000511892 CASKIN1Q8WXD9 1431 aa9.51□□□□□ -0.89
RNF4-217ENST00000511892 CDC42BPBQ9Y5S2 1711 aa9.51□□□□□ -0.89
RNF4-217ENST00000511892 PLCH2O75038 1416 aa9.5□□□□□ -0.89
RNF4-217ENST00000511892 TROQ12816 1431 aaPredicted RBP9.49□□□□□ -0.89
RNF4-217ENST00000511892 SIGLEC1Q9BZZ2 1709 aa9.49□□□□□ -0.89
RNF4-217ENST00000511892 RBM42Q9BTD8 480 aaKnown RBP9.49□□□□□ -0.89
RNF4-217ENST00000511892 ADAMTSL3P82987 1691 aa9.48□□□□□ -0.89
RNF4-217ENST00000511892 CLIP1P30622 1438 aa9.48□□□□□ -0.89
RNF4-217ENST00000511892 CDC42BPAQ5VT25 1732 aa9.48□□□□□ -0.89
RNF4-217ENST00000511892 DENND4BO75064 1496 aaPredicted RBP9.48□□□□□ -0.89
RNF4-217ENST00000511892 ZMYM4Q5VZL5 1548 aa9.48□□□□□ -0.89
RNF4-217ENST00000511892 ARHGEF40Q8TER5 1519 aa9.48□□□□□ -0.89
RNF4-217ENST00000511892 CDK11AQ9UQ88 783 aaPredicted RBP9.48□□□□□ -0.89
RNF4-217ENST00000511892 BCORL1Q5H9F3 1711 aa9.48□□□□□ -0.89
RNF4-217ENST00000511892 CCDC18Q5T9S5 1454 aa9.47□□□□□ -0.89
RNF4-217ENST00000511892 FYCO1Q9BQS8 1478 aa9.47□□□□□ -0.89
RNF4-217ENST00000511892 PREX2Q70Z35 1606 aa9.46□□□□□ -0.89
RNF4-217ENST00000511892 SLC4A1APQ9BWU0 796 aaKnown RBP9.45□□□□□ -0.9
RNF4-217ENST00000511892 POGZQ7Z3K3 1410 aa9.45□□□□□ -0.9
RNF4-217ENST00000511892 SCAPERQ9BY12 1400 aa9.45□□□□□ -0.9
RNF4-217ENST00000511892 ATF5Q9Y2D1 282 aaPredicted RBP9.44□□□□□ -0.9
RNF4-217ENST00000511892 ARHGAP5Q13017 1502 aa9.44□□□□□ -0.9
RNF4-217ENST00000511892 ZFYVE16Q7Z3T8 1539 aa9.44□□□□□ -0.9
RNF4-217ENST00000511892 MADDQ8WXG6 1647 aa9.44□□□□□ -0.9
RNF4-217ENST00000511892 ITSN2Q9NZM3 1697 aa9.43□□□□□ -0.9
RNF4-217ENST00000511892 HECW2Q9P2P5 1572 aa9.43□□□□□ -0.9
RNF4-217ENST00000511892 MAGI2Q86UL8 1455 aa9.43□□□□□ -0.9
RNF4-217ENST00000511892 YEATS2Q9ULM3 1422 aa9.43□□□□□ -0.9
RNF4-217ENST00000511892 EFCAB2Q5VUJ9 269 aa9.43□□□□□ -0.9
RNF4-217ENST00000511892 RIMS1Q86UR5 1692 aaKnown RBP9.42□□□□□ -0.9
RNF4-217ENST00000511892 CEP162Q5TB80 1403 aa9.42□□□□□ -0.9
RNF4-217ENST00000511892 CHRDL2Q6WN34 429 aa9.42□□□□□ -0.9
RNF4-217ENST00000511892 KDM5CP41229 1560 aa9.41□□□□□ -0.9
RNF4-217ENST00000511892 ABCC1P33527 1531 aa9.41□□□□□ -0.9
RNF4-217ENST00000511892 ARHGEF12Q9NZN5 1544 aa9.41□□□□□ -0.9
RNF4-217ENST00000511892 PTPRMP28827 1452 aa9.4□□□□□ -0.9
RNF4-217ENST00000511892 FER1L4A9Z1Z3 1794 aa9.4□□□□□ -0.9
RNF4-217ENST00000511892 ZNF518AQ6AHZ1 1483 aa9.4□□□□□ -0.91
RNF4-217ENST00000511892 ARID4BQ4LE39 1312 aaPredicted RBP9.39□□□□□ -0.91
RNF4-217ENST00000511892 SAMD9LQ8IVG5 1584 aa9.39□□□□□ -0.91
RNF4-217ENST00000511892 LOC105371045A0A1W2PR82 267 aa9.39□□□□□ -0.91
RNF4-217ENST00000511892 AFAP1Q8N556 730 aa9.39□□□□□ -0.91
RNF4-217ENST00000511892 ABCA6Q8N139 1617 aa9.38□□□□□ -0.91
RNF4-217ENST00000511892 DIP2CQ9Y2E4 1556 aa9.38□□□□□ -0.91
RNF4-217ENST00000511892 KIDINS220Q9ULH0 1771 aa9.38□□□□□ -0.91
RNF4-217ENST00000511892 GPATCH8Q9UKJ3 1502 aaKnown RBP9.38□□□□□ -0.91
RNF4-217ENST00000511892 ATP10AO60312 1499 aa9.38□□□□□ -0.91
RNF4-217ENST00000511892 TRAPPC8Q9Y2L5 1435 aa9.38□□□□□ -0.91
RNF4-217ENST00000511892 FOXD4L1Q9NU39 408 aa9.37□□□□□ -0.91
RNF4-217ENST00000511892 C9orf84Q5VXU9 1444 aa9.37□□□□□ -0.91
RNF4-217ENST00000511892 MLH3Q9UHC1 1453 aa9.36□□□□□ -0.91
RNF4-217ENST00000511892 TIAM1Q13009 1591 aa9.36□□□□□ -0.91
RNF4-217ENST00000511892 EHBP1L1Q8N3D4 1523 aa9.36□□□□□ -0.91
RNF4-217ENST00000511892 REREQ9P2R6 1566 aa9.35□□□□□ -0.91
RNF4-217ENST00000511892 SYCP2Q9BX26 1530 aa9.35□□□□□ -0.91
RNF4-217ENST00000511892 MTUS2Q5JR59 1369 aa9.34□□□□□ -0.91
RNF4-217ENST00000511892 MLECQ14165 292 aa9.33□□□□□ -0.92
RNF4-217ENST00000511892 ZNF777Q9ULD5 760 aaPredicted RBP9.33□□□□□ -0.92
RNF4-217ENST00000511892 SUPT6HQ7KZ85 1726 aaKnown RBP9.33□□□□□ -0.92
RNF4-217ENST00000511892 CCNB3Q8WWL7 1395 aa9.32□□□□□ -0.92
RNF4-217ENST00000511892 INO80Q9ULG1 1556 aaPredicted RBP9.32□□□□□ -0.92
RNF4-217ENST00000511892 VPS8Q8N3P4 1428 aa9.31□□□□□ -0.92
RNF4-217ENST00000511892 HNRNPMP52272 730 aaKnown RBP eCLIP9.31□□□□□ -0.92
RNF4-217ENST00000511892 CFDP1Q9UEE9 299 aaPredicted RBP9.31□□□□□ -0.92
RNF4-217ENST00000511892 MYT1LQ9UL68 1186 aa9.31□□□□□ -0.92
RNF4-217ENST00000511892 LMTK3Q96Q04 1460 aa9.31□□□□□ -0.92
RNF4-217ENST00000511892 SETD1BQ9UPS6 1966 aaKnown RBP9.31□□□□□ -0.92
RNF4-217ENST00000511892 AGLP35573 1532 aa9.31□□□□□ -0.92
RNF4-217ENST00000511892 KIAA1107Q9UPP5 1409 aa9.31□□□□□ -0.92
RNF4-217ENST00000511892 C3P01024 1663 aa9.3□□□□□ -0.92
RNF4-217ENST00000511892 PLEKHH2Q8IVE3 1493 aa9.3□□□□□ -0.92
RNF4-217ENST00000511892 ATP7AQ04656 1500 aa9.3□□□□□ -0.92
RNF4-217ENST00000511892 ZNF644Q9H582 1327 aaPredicted RBP9.3□□□□□ -0.92
RNF4-217ENST00000511892 ADGBQ8N7X0 1667 aa9.29□□□□□ -0.92
RNF4-217ENST00000511892 NCOA2Q15596 1464 aa9.29□□□□□ -0.92
RNF4-217ENST00000511892 PREX1Q8TCU6 1659 aa9.29□□□□□ -0.92
RNF4-217ENST00000511892 LRRC9Q6ZRR7 1453 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms