RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 AKNAQ7Z591 1439 aa16.11■□□□□ 0.17
COPS4-211ENST00000511891 LRRIQ1Q96JM4 1722 aa16.1■□□□□ 0.17
COPS4-211ENST00000511891 PCF11O94913 1555 aaKnown RBP16.09■□□□□ 0.17
COPS4-211ENST00000511891 CDK11AQ9UQ88 783 aaPredicted RBP16.09■□□□□ 0.17
COPS4-211ENST00000511891 CLIP1P30622 1438 aa16.09■□□□□ 0.17
COPS4-211ENST00000511891 CASKIN1Q8WXD9 1431 aa16.08■□□□□ 0.16
COPS4-211ENST00000511891 DENND4BO75064 1496 aaPredicted RBP16.08■□□□□ 0.16
COPS4-211ENST00000511891 KIF14Q15058 1648 aa16.08■□□□□ 0.16
COPS4-211ENST00000511891 PLCH2O75038 1416 aa16.07■□□□□ 0.16
COPS4-211ENST00000511891 TROQ12816 1431 aaPredicted RBP16.07■□□□□ 0.16
COPS4-211ENST00000511891 CFAP74Q9C0B2 1584 aa16.05■□□□□ 0.16
COPS4-211ENST00000511891 RICTORQ6R327 1708 aa16.04■□□□□ 0.16
COPS4-211ENST00000511891 CCDC18Q5T9S5 1454 aa16.02■□□□□ 0.15
COPS4-211ENST00000511891 SCAPERQ9BY12 1400 aa16.02■□□□□ 0.15
COPS4-211ENST00000511891 EFCAB2Q5VUJ9 269 aa16.01■□□□□ 0.15
COPS4-211ENST00000511891 MYO5CQ9NQX4 1742 aa16.01■□□□□ 0.15
COPS4-211ENST00000511891 FYCO1Q9BQS8 1478 aa16.01■□□□□ 0.15
COPS4-211ENST00000511891 ARID4BQ4LE39 1312 aaPredicted RBP16■□□□□ 0.15
COPS4-211ENST00000511891 ARHGEF40Q8TER5 1519 aa15.99■□□□□ 0.15
COPS4-211ENST00000511891 YEATS2Q9ULM3 1422 aa15.99■□□□□ 0.15
COPS4-211ENST00000511891 ARHGAP5Q13017 1502 aa15.99■□□□□ 0.15
COPS4-211ENST00000511891 POGZQ7Z3K3 1410 aa15.98■□□□□ 0.15
COPS4-211ENST00000511891 ZMYM4Q5VZL5 1548 aa15.98■□□□□ 0.15
COPS4-211ENST00000511891 ZFYVE16Q7Z3T8 1539 aa15.96■□□□□ 0.15
COPS4-211ENST00000511891 ADAMTSL3P82987 1691 aa15.95■□□□□ 0.14
COPS4-211ENST00000511891 CEP162Q5TB80 1403 aa15.95■□□□□ 0.14
COPS4-211ENST00000511891 LOC105371045A0A1W2PR82 267 aa15.94■□□□□ 0.14
COPS4-211ENST00000511891 BCORL1Q5H9F3 1711 aa15.94■□□□□ 0.14
COPS4-211ENST00000511891 CDC42BPBQ9Y5S2 1711 aa15.94■□□□□ 0.14
COPS4-211ENST00000511891 AFAP1Q8N556 730 aa15.93■□□□□ 0.14
COPS4-211ENST00000511891 MAGI2Q86UL8 1455 aa15.92■□□□□ 0.14
COPS4-211ENST00000511891 SIGLEC1Q9BZZ2 1709 aa15.92■□□□□ 0.14
COPS4-211ENST00000511891 HECW2Q9P2P5 1572 aa15.92■□□□□ 0.14
COPS4-211ENST00000511891 PTPRMP28827 1452 aa15.91■□□□□ 0.14
COPS4-211ENST00000511891 PREX2Q70Z35 1606 aa15.91■□□□□ 0.14
COPS4-211ENST00000511891 MADDQ8WXG6 1647 aa15.91■□□□□ 0.14
COPS4-211ENST00000511891 MLECQ14165 292 aa15.89■□□□□ 0.13
COPS4-211ENST00000511891 ZNF518AQ6AHZ1 1483 aa15.89■□□□□ 0.13
COPS4-211ENST00000511891 ARHGEF12Q9NZN5 1544 aa15.89■□□□□ 0.13
COPS4-211ENST00000511891 CDC42BPAQ5VT25 1732 aa15.88■□□□□ 0.13
COPS4-211ENST00000511891 TRAPPC8Q9Y2L5 1435 aa15.88■□□□□ 0.13
COPS4-211ENST00000511891 MYT1LQ9UL68 1186 aa15.88■□□□□ 0.13
COPS4-211ENST00000511891 ZNF777Q9ULD5 760 aaPredicted RBP15.88■□□□□ 0.13
COPS4-211ENST00000511891 ATP10AO60312 1499 aa15.88■□□□□ 0.13
COPS4-211ENST00000511891 ABCC1P33527 1531 aa15.87■□□□□ 0.13
COPS4-211ENST00000511891 KDM5CP41229 1560 aa15.87■□□□□ 0.13
COPS4-211ENST00000511891 MTUS2Q5JR59 1369 aa15.87■□□□□ 0.13
COPS4-211ENST00000511891 GPATCH8Q9UKJ3 1502 aaKnown RBP15.86■□□□□ 0.13
COPS4-211ENST00000511891 RIMS1Q86UR5 1692 aaKnown RBP15.86■□□□□ 0.13
COPS4-211ENST00000511891 C9orf84Q5VXU9 1444 aa15.85■□□□□ 0.13
COPS4-211ENST00000511891 ITSN2Q9NZM3 1697 aa15.84■□□□□ 0.13
COPS4-211ENST00000511891 CCNB3Q8WWL7 1395 aa15.83■□□□□ 0.12
COPS4-211ENST00000511891 SAMD9LQ8IVG5 1584 aa15.83■□□□□ 0.12
COPS4-211ENST00000511891 DIP2CQ9Y2E4 1556 aa15.82■□□□□ 0.12
COPS4-211ENST00000511891 HNRNPMP52272 730 aaKnown RBP eCLIP15.81■□□□□ 0.12
COPS4-211ENST00000511891 CFDP1Q9UEE9 299 aaPredicted RBP15.81■□□□□ 0.12
COPS4-211ENST00000511891 MLH3Q9UHC1 1453 aa15.81■□□□□ 0.12
COPS4-211ENST00000511891 ABCA6Q8N139 1617 aa15.8■□□□□ 0.12
COPS4-211ENST00000511891 EHBP1L1Q8N3D4 1523 aa15.8■□□□□ 0.12
COPS4-211ENST00000511891 SYCP2Q9BX26 1530 aa15.8■□□□□ 0.12
COPS4-211ENST00000511891 FER1L4A9Z1Z3 1794 aa15.77■□□□□ 0.12
COPS4-211ENST00000511891 ZNF644Q9H582 1327 aaPredicted RBP15.77■□□□□ 0.12
COPS4-211ENST00000511891 TIAM1Q13009 1591 aa15.77■□□□□ 0.11
COPS4-211ENST00000511891 KIDINS220Q9ULH0 1771 aa15.77■□□□□ 0.11
COPS4-211ENST00000511891 VPS8Q8N3P4 1428 aa15.77■□□□□ 0.11
COPS4-211ENST00000511891 SPAG9O60271 1321 aaKnown RBP15.75■□□□□ 0.11
COPS4-211ENST00000511891 KIAA1107Q9UPP5 1409 aa15.75■□□□□ 0.11
COPS4-211ENST00000511891 REREQ9P2R6 1566 aa15.75■□□□□ 0.11
COPS4-211ENST00000511891 PLEKHH2Q8IVE3 1493 aa15.74■□□□□ 0.11
COPS4-211ENST00000511891 LMTK3Q96Q04 1460 aa15.74■□□□□ 0.11
COPS4-211ENST00000511891 CEBPAP49715 358 aaPredicted RBP15.74■□□□□ 0.11
COPS4-211ENST00000511891 NCOA2Q15596 1464 aa15.72■□□□□ 0.11
COPS4-211ENST00000511891 HSPA2P54652 639 aa15.72■□□□□ 0.11
COPS4-211ENST00000511891 AGLP35573 1532 aa15.71■□□□□ 0.11
COPS4-211ENST00000511891 ATP7AQ04656 1500 aa15.7■□□□□ 0.1
COPS4-211ENST00000511891 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.7■□□□□ 0.1
COPS4-211ENST00000511891 SUPT6HQ7KZ85 1726 aaKnown RBP15.7■□□□□ 0.1
COPS4-211ENST00000511891 KANK4Q5T7N3 995 aaPredicted RBP15.69■□□□□ 0.1
COPS4-211ENST00000511891 MBD5Q9P267 1494 aa15.69■□□□□ 0.1
COPS4-211ENST00000511891 INO80Q9ULG1 1556 aaPredicted RBP15.68■□□□□ 0.1
COPS4-211ENST00000511891 LRRC9Q6ZRR7 1453 aa15.68■□□□□ 0.1
COPS4-211ENST00000511891 ESF1Q9H501 851 aaKnown RBP15.66■□□□□ 0.1
COPS4-211ENST00000511891 CAMSAP2Q08AD1 1489 aa15.65■□□□□ 0.1
COPS4-211ENST00000511891 A2MP01023 1474 aa15.65■□□□□ 0.1
COPS4-211ENST00000511891 ILDR1Q86SU0 546 aaPredicted RBP15.64■□□□□ 0.09
COPS4-211ENST00000511891 PLXNC1O60486 1568 aa15.62■□□□□ 0.09
COPS4-211ENST00000511891 C3P01024 1663 aa15.62■□□□□ 0.09
COPS4-211ENST00000511891 MAP3K1Q13233 1512 aa15.62■□□□□ 0.09
COPS4-211ENST00000511891 CCDC141Q6ZP82 1450 aa15.61■□□□□ 0.09
COPS4-211ENST00000511891 RTEL1-TNFRSF6BF6WH68 1400 aa15.6■□□□□ 0.09
COPS4-211ENST00000511891 GGT6Q6P531 493 aa15.6■□□□□ 0.09
COPS4-211ENST00000511891 PREX1Q8TCU6 1659 aa15.6■□□□□ 0.09
COPS4-211ENST00000511891 CNTLNQ9NXG0 1405 aa15.6■□□□□ 0.09
COPS4-211ENST00000511891 POTEHQ6S545 545 aa15.59■□□□□ 0.09
COPS4-211ENST00000511891 ADGBQ8N7X0 1667 aa15.58■□□□□ 0.08
COPS4-211ENST00000511891 UHRF1BP1Q6BDS2 1440 aa15.58■□□□□ 0.08
COPS4-211ENST00000511891 APLP2Q06481 763 aa15.57■□□□□ 0.08
COPS4-211ENST00000511891 RSPH4AQ5TD94 716 aa15.57■□□□□ 0.08
COPS4-211ENST00000511891 ZMYM3Q14202 1370 aa15.57■□□□□ 0.08
COPS4-211ENST00000511891 DHX29Q7Z478 1369 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms