RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.75□□□□□ -0.53
COPS4-209ENST00000511653 ABCC10Q5T3U5 1492 aa11.75□□□□□ -0.53
COPS4-209ENST00000511653 TSPOAP1O95153 1857 aa11.74□□□□□ -0.53
COPS4-209ENST00000511653 KIAA0586Q9BVV6 1533 aa11.74□□□□□ -0.53
COPS4-209ENST00000511653 IGF1RP08069 1367 aa11.73□□□□□ -0.53
COPS4-209ENST00000511653 PYGBP11216 843 aa11.73□□□□□ -0.53
COPS4-209ENST00000511653 HS6ST3Q8IZP7 471 aa11.72□□□□□ -0.53
COPS4-209ENST00000511653 KIF27Q86VH2 1401 aa11.72□□□□□ -0.53
COPS4-209ENST00000511653 RIOK3O14730 519 aaKnown RBP11.71□□□□□ -0.53
COPS4-209ENST00000511653 FAM69CQ0P6D2 419 aa11.7□□□□□ -0.54
COPS4-209ENST00000511653 KDM2AQ9Y2K7 1162 aa11.7□□□□□ -0.54
COPS4-209ENST00000511653 FARP1Q9Y4F1 1045 aaPredicted RBP11.7□□□□□ -0.54
COPS4-209ENST00000511653 PRKAR2AP13861 404 aaKnown RBP11.69□□□□□ -0.54
COPS4-209ENST00000511653 CHRM1P11229 460 aaPredicted RBP11.68□□□□□ -0.54
COPS4-209ENST00000511653 NKX1-1Q15270 411 aaPredicted RBP11.68□□□□□ -0.54
COPS4-209ENST00000511653 KDM6BO15054 1643 aa11.68□□□□□ -0.54
COPS4-209ENST00000511653 FXR2P51116 673 aaKnown RBP eCLIP11.68□□□□□ -0.54
COPS4-209ENST00000511653 TSPYL2Q9H2G4 693 aaPredicted RBP11.68□□□□□ -0.54
COPS4-209ENST00000511653 SPRYD3Q8NCJ5 442 aa11.67□□□□□ -0.54
COPS4-209ENST00000511653 TSHZ2Q9NRE2 1034 aa11.67□□□□□ -0.54
COPS4-209ENST00000511653 IQGAP2Q13576 1575 aa11.66□□□□□ -0.54
COPS4-209ENST00000511653 PPRC1Q5VV67 1664 aaKnown RBP11.65□□□□□ -0.55
COPS4-209ENST00000511653 CARMIL1Q5VZK9 1371 aa11.65□□□□□ -0.55
COPS4-209ENST00000511653 PTPRGP23470 1445 aa11.63□□□□□ -0.55
COPS4-209ENST00000511653 TTBK1Q5TCY1 1321 aaPredicted RBP11.62□□□□□ -0.55
COPS4-209ENST00000511653 VSIG10Q8N0Z9 540 aa11.62□□□□□ -0.55
COPS4-209ENST00000511653 ABCC2Q92887 1545 aa11.62□□□□□ -0.55
COPS4-209ENST00000511653 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.62□□□□□ -0.55
COPS4-209ENST00000511653 ZFP91Q96JP5 570 aaPredicted RBP11.62□□□□□ -0.55
COPS4-209ENST00000511653 CHRDL2Q6WN34 429 aa11.61□□□□□ -0.55
COPS4-209ENST00000511653 PIP4P2Q8N4L2 257 aa11.61□□□□□ -0.55
COPS4-209ENST00000511653 DISP1Q96F81 1524 aa11.61□□□□□ -0.55
COPS4-209ENST00000511653 TNIKQ9UKE5 1360 aa11.6□□□□□ -0.55
COPS4-209ENST00000511653 STK25O00506 426 aa11.6□□□□□ -0.55
COPS4-209ENST00000511653 VGFO15240 615 aaPredicted RBP11.6□□□□□ -0.55
COPS4-209ENST00000511653 CARMIL2Q6F5E8 1435 aa11.59□□□□□ -0.55
COPS4-209ENST00000511653 ASXL2Q76L83 1435 aa11.59□□□□□ -0.55
COPS4-209ENST00000511653 GLI2P10070 1586 aa11.58□□□□□ -0.56
COPS4-209ENST00000511653 UHRF1BP1LA0JNW5 1464 aa11.57□□□□□ -0.56
COPS4-209ENST00000511653 KIAA0556O60303 1618 aa11.57□□□□□ -0.56
COPS4-209ENST00000511653 ZCCHC11Q5TAX3 1644 aaKnown RBP11.57□□□□□ -0.56
COPS4-209ENST00000511653 UGGT2Q9NYU1 1516 aa11.56□□□□□ -0.56
COPS4-209ENST00000511653 KDM4FA0A1W2PPD8 638 aa11.56□□□□□ -0.56
COPS4-209ENST00000511653 BCL11BQ9C0K0 894 aaPredicted RBP11.56□□□□□ -0.56
COPS4-209ENST00000511653 CCDC61Q9Y6R9 512 aa11.56□□□□□ -0.56
COPS4-209ENST00000511653 GTPBP6O43824 516 aaPredicted RBP11.55□□□□□ -0.56
COPS4-209ENST00000511653 PLB1Q6P1J6 1458 aa11.55□□□□□ -0.56
COPS4-209ENST00000511653 CTTNBP2Q8WZ74 1663 aa11.55□□□□□ -0.56
COPS4-209ENST00000511653 UACAQ9BZF9 1416 aa11.55□□□□□ -0.56
COPS4-209ENST00000511653 MAP3K4Q9Y6R4 1608 aa11.55□□□□□ -0.56
COPS4-209ENST00000511653 SGIP1Q9BQI5 828 aa11.55□□□□□ -0.56
COPS4-209ENST00000511653 PCDHB8Q9UN66 801 aa11.55□□□□□ -0.56
COPS4-209ENST00000511653 PCDHB13Q9Y5F0 798 aa11.55□□□□□ -0.56
COPS4-209ENST00000511653 STK24Q9Y6E0 443 aa11.55□□□□□ -0.56
COPS4-209ENST00000511653 RAPGEF2Q9Y4G8 1499 aa11.54□□□□□ -0.56
COPS4-209ENST00000511653 KDM5BQ9UGL1 1544 aa11.54□□□□□ -0.56
COPS4-209ENST00000511653 EPRSP07814 1512 aaKnown RBP11.53□□□□□ -0.56
COPS4-209ENST00000511653 COL17A1Q9UMD9 1497 aaPredicted RBP11.51□□□□□ -0.57
COPS4-209ENST00000511653 TAOK2Q9UL54 1235 aa11.5□□□□□ -0.57
COPS4-209ENST00000511653 ADGRL1O94910 1474 aa11.48□□□□□ -0.57
COPS4-209ENST00000511653 WDR7Q9Y4E6 1490 aa11.46□□□□□ -0.57
COPS4-209ENST00000511653 ABCA8O94911 1581 aa11.46□□□□□ -0.58
COPS4-209ENST00000511653 TEX14Q8IWB6 1497 aa11.45□□□□□ -0.58
COPS4-209ENST00000511653 CFAP43Q8NDM7 1665 aa11.44□□□□□ -0.58
COPS4-209ENST00000511653 MAP3K13O43283 966 aa11.43□□□□□ -0.58
COPS4-209ENST00000511653 ZNF467Q7Z7K2 595 aaPredicted RBP11.43□□□□□ -0.58
COPS4-209ENST00000511653 IFNL1Q8IU54 200 aa11.43□□□□□ -0.58
COPS4-209ENST00000511653 KIF12Q96FN5 646 aa11.42□□□□□ -0.58
COPS4-209ENST00000511653 GOLGA3Q08378 1498 aa11.42□□□□□ -0.58
COPS4-209ENST00000511653 PRXQ9BXM0 1461 aa11.42□□□□□ -0.58
COPS4-209ENST00000511653 PDAP1Q13442 181 aaKnown RBP11.4□□□□□ -0.58
COPS4-209ENST00000511653 ZNF579Q8NAF0 562 aaKnown RBP11.4□□□□□ -0.59
COPS4-209ENST00000511653 PSEN1P49768 467 aa11.39□□□□□ -0.59
COPS4-209ENST00000511653 BCANQ96GW7 911 aa11.39□□□□□ -0.59
COPS4-209ENST00000511653 HECW2Q9P2P5 1572 aa11.39□□□□□ -0.59
COPS4-209ENST00000511653 MAGI3Q5TCQ9 1506 aa11.39□□□□□ -0.59
COPS4-209ENST00000511653 PHF12Q96QT6 1004 aa11.38□□□□□ -0.59
COPS4-209ENST00000511653 KIF21BO75037 1637 aa11.38□□□□□ -0.59
COPS4-209ENST00000511653 CD109Q6YHK3 1445 aa11.37□□□□□ -0.59
COPS4-209ENST00000511653 ZRANB1Q9UGI0 708 aa11.37□□□□□ -0.59
COPS4-209ENST00000511653 CD44P16070 742 aaKnown RBP11.36□□□□□ -0.59
COPS4-209ENST00000511653 PAK3O75914 559 aaPredicted RBP11.36□□□□□ -0.59
COPS4-209ENST00000511653 KCNH8Q96L42 1107 aa11.36□□□□□ -0.59
COPS4-209ENST00000511653 SAMD9Q5K651 1589 aa11.36□□□□□ -0.59
COPS4-209ENST00000511653 ARID3CA6NKF2 412 aa11.33□□□□□ -0.6
COPS4-209ENST00000511653 PRKCSHP14314 528 aaPredicted RBP11.33□□□□□ -0.6
COPS4-209ENST00000511653 MFRPQ9BY79 579 aa11.33□□□□□ -0.6
COPS4-209ENST00000511653 ATP10BO94823 1461 aa11.33□□□□□ -0.6
COPS4-209ENST00000511653 ABCA9Q8IUA7 1624 aa11.33□□□□□ -0.6
COPS4-209ENST00000511653 RAPGEF6Q8TEU7 1601 aa11.32□□□□□ -0.6
COPS4-209ENST00000511653 ILDR1Q86SU0 546 aaPredicted RBP11.31□□□□□ -0.6
COPS4-209ENST00000511653 P3H3Q8IVL6 736 aa11.31□□□□□ -0.6
COPS4-209ENST00000511653 TRPC6Q9Y210 931 aa11.31□□□□□ -0.6
COPS4-209ENST00000511653 CADPS2Q86UW7 1296 aa11.3□□□□□ -0.6
COPS4-209ENST00000511653 ARAP3Q8WWN8 1544 aa11.3□□□□□ -0.6
COPS4-209ENST00000511653 EFCAB3Q8N7B9 438 aa11.29□□□□□ -0.6
COPS4-209ENST00000511653 FRMPD1Q5SYB0 1578 aa11.28□□□□□ -0.6
COPS4-209ENST00000511653 CABP2Q9NPB3 220 aa11.27□□□□□ -0.6
COPS4-209ENST00000511653 C19orf67A6NJJ6 358 aa11.27□□□□□ -0.61
COPS4-209ENST00000511653 PPP1R37O75864 691 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms