RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 KIF3BO15066 747 aa11.73□□□□□ -0.53
NEK1-207ENST00000511633 NPHP1O15259 732 aa11.73□□□□□ -0.53
NEK1-207ENST00000511633 SMARCA4P51532 1647 aa11.71□□□□□ -0.53
NEK1-207ENST00000511633 OS9Q13438 667 aaPredicted RBP11.71□□□□□ -0.53
NEK1-207ENST00000511633 TPRNQ4KMQ1 711 aa11.71□□□□□ -0.53
NEK1-207ENST00000511633 NCLP19338 710 aaKnown RBP11.71□□□□□ -0.54
NEK1-207ENST00000511633 PPP4R2Q9NY27 417 aa11.7□□□□□ -0.54
NEK1-207ENST00000511633 NUTM2DQ5VT03 806 aaPredicted RBP11.7□□□□□ -0.54
NEK1-207ENST00000511633 HDGFL2Q7Z4V5 671 aaPredicted RBP11.7□□□□□ -0.54
NEK1-207ENST00000511633 JPH4Q96JJ6 628 aa11.7□□□□□ -0.54
NEK1-207ENST00000511633 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
NEK1-207ENST00000511633 KTN1Q86UP2 1357 aaKnown RBP11.69□□□□□ -0.54
NEK1-207ENST00000511633 FANCD2Q9BXW9 1451 aa11.68□□□□□ -0.54
NEK1-207ENST00000511633 B4GALNT3Q6L9W6 998 aa11.68□□□□□ -0.54
NEK1-207ENST00000511633 SPAG9O60271 1321 aaKnown RBP11.67□□□□□ -0.54
NEK1-207ENST00000511633 GOLGA6L22H0YM25 854 aa11.67□□□□□ -0.54
NEK1-207ENST00000511633 TAOK2Q9UL54 1235 aa11.67□□□□□ -0.54
NEK1-207ENST00000511633 MS4A1P11836 297 aa11.67□□□□□ -0.54
NEK1-207ENST00000511633 CCDC18Q5T9S5 1454 aa11.67□□□□□ -0.54
NEK1-207ENST00000511633 CHMP4BQ9H444 224 aaKnown RBP11.66□□□□□ -0.54
NEK1-207ENST00000511633 RTF1Q92541 710 aaKnown RBP11.65□□□□□ -0.54
NEK1-207ENST00000511633 RUSC2Q8N2Y8 1516 aa11.65□□□□□ -0.54
NEK1-207ENST00000511633 WASHC2CQ9Y4E1 1318 aa11.65□□□□□ -0.54
NEK1-207ENST00000511633 CCER2I3L3R5 266 aa11.65□□□□□ -0.54
NEK1-207ENST00000511633 U2AF1L5P0DN76 240 aaPredicted RBP11.64□□□□□ -0.55
NEK1-207ENST00000511633 U2AF1Q01081 240 aaKnown RBP eCLIP11.64□□□□□ -0.55
NEK1-207ENST00000511633 L3MBTL2Q969R5 705 aa11.64□□□□□ -0.55
NEK1-207ENST00000511633 CDK11BP21127 795 aaKnown RBP11.63□□□□□ -0.55
NEK1-207ENST00000511633 EIF3AQ14152 1382 aaKnown RBP11.62□□□□□ -0.55
NEK1-207ENST00000511633 CSB-PGBD3P0DP91 1061 aa11.61□□□□□ -0.55
NEK1-207ENST00000511633 KCNJ4P48050 445 aa11.61□□□□□ -0.55
NEK1-207ENST00000511633 GOLGA2Q08379 1002 aa11.61□□□□□ -0.55
NEK1-207ENST00000511633 ZRSR1Q15695 479 aaKnown RBP11.6□□□□□ -0.55
NEK1-207ENST00000511633 RSPH4AQ5TD94 716 aa11.6□□□□□ -0.55
NEK1-207ENST00000511633 FGD1P98174 961 aa11.6□□□□□ -0.55
NEK1-207ENST00000511633 NAP1L2Q9ULW6 460 aaPredicted RBP11.59□□□□□ -0.55
NEK1-207ENST00000511633 RALBP1Q15311 655 aa11.59□□□□□ -0.55
NEK1-207ENST00000511633 TRIM44Q96DX7 344 aaPredicted RBP11.59□□□□□ -0.55
NEK1-207ENST00000511633 EID1Q9Y6B2 187 aa11.59□□□□□ -0.55
NEK1-207ENST00000511633 APBB1O00213 710 aa11.58□□□□□ -0.55
NEK1-207ENST00000511633 TULP1O00294 542 aaPredicted RBP11.58□□□□□ -0.55
NEK1-207ENST00000511633 HSP90AB1P08238 724 aaKnown RBP11.58□□□□□ -0.56
NEK1-207ENST00000511633 PTPRGP23470 1445 aa11.58□□□□□ -0.56
NEK1-207ENST00000511633 NUTM2FA1L443 756 aa11.58□□□□□ -0.56
NEK1-207ENST00000511633 ANP32EQ9BTT0 268 aa11.58□□□□□ -0.56
NEK1-207ENST00000511633 CYB5RLQ6IPT4 315 aa11.57□□□□□ -0.56
NEK1-207ENST00000511633 ZNF330Q9Y3S2 320 aaPredicted RBP11.57□□□□□ -0.56
NEK1-207ENST00000511633 TRAK1Q9UPV9 953 aa11.57□□□□□ -0.56
NEK1-207ENST00000511633 TERF2IPQ9NYB0 399 aa11.56□□□□□ -0.56
NEK1-207ENST00000511633 FGD5Q6ZNL6 1462 aa11.55□□□□□ -0.56
NEK1-207ENST00000511633 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.55□□□□□ -0.562e-6■■■■□ 20.3
NEK1-207ENST00000511633 CCDC146Q8IYE0 955 aa11.55□□□□□ -0.56
NEK1-207ENST00000511633 RAD54L2Q9Y4B4 1467 aa11.55□□□□□ -0.56
NEK1-207ENST00000511633 PTMAP06454 111 aaKnown RBP11.55□□□□□ -0.56
NEK1-207ENST00000511633 NGDNQ8NEJ9 315 aaKnown RBP11.55□□□□□ -0.56
NEK1-207ENST00000511633 IPO8O15397 1037 aaKnown RBP11.54□□□□□ -0.56
NEK1-207ENST00000511633 ITPRIPQ8IWB1 547 aa11.54□□□□□ -0.56
NEK1-207ENST00000511633 RCAN3Q9UKA8 241 aa11.54□□□□□ -0.56
NEK1-207ENST00000511633 CALD1Q05682 793 aaKnown RBP11.53□□□□□ -0.56
NEK1-207ENST00000511633 GAPVD1Q14C86 1478 aa11.53□□□□□ -0.56
NEK1-207ENST00000511633 CCDC144AA2RUR9 1427 aa11.53□□□□□ -0.56
NEK1-207ENST00000511633 SPRYD3Q8NCJ5 442 aa11.52□□□□□ -0.56
NEK1-207ENST00000511633 NOP58Q9Y2X3 529 aaKnown RBP11.52□□□□□ -0.56
NEK1-207ENST00000511633 CCDC9Q9Y3X0 531 aaKnown RBP11.52□□□□□ -0.57
NEK1-207ENST00000511633 OSCARQ8IYS5 282 aa11.52□□□□□ -0.57
NEK1-207ENST00000511633 LTV1Q96GA3 475 aaPredicted RBP11.51□□□□□ -0.57
NEK1-207ENST00000511633 HSCBQ8IWL3 235 aa11.51□□□□□ -0.57
NEK1-207ENST00000511633 ST20-MTHFSA0A0A6YYL1 179 aa11.51□□□□□ -0.57
NEK1-207ENST00000511633 PLCB2Q00722 1185 aa11.51□□□□□ -0.57
NEK1-207ENST00000511633 IGF1RP08069 1367 aa11.5□□□□□ -0.57
NEK1-207ENST00000511633 AMPHP49418 695 aa11.5□□□□□ -0.57
NEK1-207ENST00000511633 MCCP23508 829 aa11.49□□□□□ -0.57
NEK1-207ENST00000511633 DHX57Q6P158 1386 aaKnown RBP11.49□□□□□ -0.57
NEK1-207ENST00000511633 SMC4Q9NTJ3 1288 aa11.49□□□□□ -0.57
NEK1-207ENST00000511633 STK31Q9BXU1 1019 aa11.48□□□□□ -0.57
NEK1-207ENST00000511633 NLRP13Q86W25 1043 aa11.48□□□□□ -0.57
NEK1-207ENST00000511633 PANK3Q9H999 370 aa11.48□□□□□ -0.57
NEK1-207ENST00000511633 AQRO60306 1485 aaKnown RBP eCLIP11.48□□□□□ -0.57
NEK1-207ENST00000511633 RWDD1Q9H446 243 aaPredicted RBP11.47□□□□□ -0.57
NEK1-207ENST00000511633 CLUAP1Q96AJ1 413 aa11.46□□□□□ -0.57
NEK1-207ENST00000511633 RRP7AQ9Y3A4 280 aaKnown RBP11.46□□□□□ -0.57
NEK1-207ENST00000511633 DNTTIP2Q5QJE6 756 aaKnown RBP11.46□□□□□ -0.58
NEK1-207ENST00000511633 ISY1Q9ULR0 285 aaKnown RBP11.46□□□□□ -0.58
NEK1-207ENST00000511633 UACAQ9BZF9 1416 aa11.45□□□□□ -0.58
NEK1-207ENST00000511633 SLC4A10Q6U841 1118 aa11.45□□□□□ -0.58
NEK1-207ENST00000511633 CHMP3Q9Y3E7 222 aa11.45□□□□□ -0.58
NEK1-207ENST00000511633 VGFO15240 615 aaPredicted RBP11.45□□□□□ -0.58
NEK1-207ENST00000511633 KIF15Q9NS87 1388 aa11.45□□□□□ -0.58
NEK1-207ENST00000511633 GOLGA6L4A6NEF3 574 aa11.45□□□□□ -0.58
NEK1-207ENST00000511633 ZNF644Q9H582 1327 aaPredicted RBP11.44□□□□□ -0.58
NEK1-207ENST00000511633 MINK1Q8N4C8 1332 aaPredicted RBP11.44□□□□□ -0.58
NEK1-207ENST00000511633 PRDM2Q13029 1718 aa11.44□□□□□ -0.58
NEK1-207ENST00000511633 KIAA1211Q6ZU35 1233 aa11.44□□□□□ -0.58
NEK1-207ENST00000511633 GLIPR1L2Q4G1C9 344 aa11.43□□□□□ -0.58
NEK1-207ENST00000511633 CENPJQ9HC77 1338 aaPredicted RBP11.43□□□□□ -0.58
NEK1-207ENST00000511633 FAM69CQ0P6D2 419 aa11.43□□□□□ -0.58
NEK1-207ENST00000511633 MYBBP1AQ9BQG0 1328 aaKnown RBP11.43□□□□□ -0.58
NEK1-207ENST00000511633 CFAP44Q96MT7 982 aa11.42□□□□□ -0.58
NEK1-207ENST00000511633 EVC2Q86UK5 1308 aa11.42□□□□□ -0.58
NEK1-207ENST00000511633 USP47Q96K76 1375 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms