RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 ROCK1Q13464 1354 aa22.64■■□□□ 1.22
SCLT1-209ENST00000511426 NPM1P06748 294 aaKnown RBP eCLIP22.64■■□□□ 1.21
SCLT1-209ENST00000511426 PTPRKQ15262 1439 aa22.63■■□□□ 1.21
SCLT1-209ENST00000511426 TTC37Q6PGP7 1564 aa22.63■■□□□ 1.21
SCLT1-209ENST00000511426 RAB3GAP2Q9H2M9 1393 aa22.62■■□□□ 1.21
SCLT1-209ENST00000511426 MYO5CQ9NQX4 1742 aa22.62■■□□□ 1.21
SCLT1-209ENST00000511426 PLEKHH2Q8IVE3 1493 aa22.61■■□□□ 1.21
SCLT1-209ENST00000511426 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
SCLT1-209ENST00000511426 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
SCLT1-209ENST00000511426 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
SCLT1-209ENST00000511426 ABCC5O15440 1437 aa22.6■■□□□ 1.21
SCLT1-209ENST00000511426 SHANK2Q9UPX8 1470 aa22.6■■□□□ 1.21
SCLT1-209ENST00000511426 RSPH4AQ5TD94 716 aa22.59■■□□□ 1.21
SCLT1-209ENST00000511426 PLCH2O75038 1416 aa22.59■■□□□ 1.21
SCLT1-209ENST00000511426 ASXL2Q76L83 1435 aa22.59■■□□□ 1.21
SCLT1-209ENST00000511426 ARHGEF5Q12774 1597 aa22.59■■□□□ 1.21
SCLT1-209ENST00000511426 CDC42BPBQ9Y5S2 1711 aa22.58■■□□□ 1.21
SCLT1-209ENST00000511426 GCC2Q8IWJ2 1684 aa22.57■■□□□ 1.2
SCLT1-209ENST00000511426 NAIPQ13075 1403 aa22.57■■□□□ 1.2
SCLT1-209ENST00000511426 ABCA9Q8IUA7 1624 aa22.56■■□□□ 1.2
SCLT1-209ENST00000511426 KIAA1107Q9UPP5 1409 aa22.56■■□□□ 1.2
SCLT1-209ENST00000511426 CROCC2H7BZ55 1655 aa22.56■■□□□ 1.2
SCLT1-209ENST00000511426 ADGRL2O95490 1459 aa22.56■■□□□ 1.2
SCLT1-209ENST00000511426 ARHGAP5Q13017 1502 aa22.55■■□□□ 1.2
SCLT1-209ENST00000511426 ZNF644Q9H582 1327 aaPredicted RBP22.55■■□□□ 1.2
SCLT1-209ENST00000511426 DHX57Q6P158 1386 aaKnown RBP22.54■■□□□ 1.2
SCLT1-209ENST00000511426 MAPKBP1O60336 1514 aa22.54■■□□□ 1.2
SCLT1-209ENST00000511426 SAMD9LQ8IVG5 1584 aa22.53■■□□□ 1.2
SCLT1-209ENST00000511426 KCNH8Q96L42 1107 aa22.52■■□□□ 1.2
SCLT1-209ENST00000511426 ADGBQ8N7X0 1667 aa22.51■■□□□ 1.19
SCLT1-209ENST00000511426 MBD5Q9P267 1494 aa22.5■■□□□ 1.19
SCLT1-209ENST00000511426 ZNF777Q9ULD5 760 aaPredicted RBP22.5■■□□□ 1.19
SCLT1-209ENST00000511426 CCDC141Q6ZP82 1450 aa22.5■■□□□ 1.19
SCLT1-209ENST00000511426 EFCAB2Q5VUJ9 269 aa22.49■■□□□ 1.19
SCLT1-209ENST00000511426 ANKRD30AQ9BXX3 1397 aa22.47■■□□□ 1.19
SCLT1-209ENST00000511426 NCOA1Q15788 1441 aa22.45■■□□□ 1.19
SCLT1-209ENST00000511426 MAST1Q9Y2H9 1570 aa22.45■■□□□ 1.19
SCLT1-209ENST00000511426 C9orf84Q5VXU9 1444 aa22.44■■□□□ 1.18
SCLT1-209ENST00000511426 TSPY4P0CV99 314 aa22.44■■□□□ 1.18
SCLT1-209ENST00000511426 TSPY10P0CW01 314 aa22.44■■□□□ 1.18
SCLT1-209ENST00000511426 ABCC1P33527 1531 aa22.44■■□□□ 1.18
SCLT1-209ENST00000511426 SYCP2Q9BX26 1530 aa22.43■■□□□ 1.18
SCLT1-209ENST00000511426 CYB5RLQ6IPT4 315 aa22.42■■□□□ 1.18
SCLT1-209ENST00000511426 CHIC2Q9UKJ5 165 aa22.42■■□□□ 1.18
SCLT1-209ENST00000511426 CFAP74Q9C0B2 1584 aa22.41■■□□□ 1.18
SCLT1-209ENST00000511426 RRP7BPQ9NSQ0 103 aa22.39■■□□□ 1.18
SCLT1-209ENST00000511426 FANCAO15360 1455 aa22.38■■□□□ 1.17
SCLT1-209ENST00000511426 GLI2P10070 1586 aa22.37■■□□□ 1.17
SCLT1-209ENST00000511426 HNRNPMP52272 730 aaKnown RBP eCLIP22.36■■□□□ 1.175e-10■■■■■ 36.7
SCLT1-209ENST00000511426 PLXNC1O60486 1568 aa22.35■■□□□ 1.17
SCLT1-209ENST00000511426 CD109Q6YHK3 1445 aa22.34■■□□□ 1.17
SCLT1-209ENST00000511426 RTEL1-TNFRSF6BF6WH68 1400 aa22.33■■□□□ 1.16
SCLT1-209ENST00000511426 ARHGEF12Q9NZN5 1544 aa22.32■■□□□ 1.16
SCLT1-209ENST00000511426 ANKRD50Q9ULJ7 1429 aa22.32■■□□□ 1.16
SCLT1-209ENST00000511426 KIF15Q9NS87 1388 aa22.3■■□□□ 1.16
SCLT1-209ENST00000511426 NEO1Q92859 1461 aa22.29■■□□□ 1.16
SCLT1-209ENST00000511426 ADGRL1O94910 1474 aa22.29■■□□□ 1.16
SCLT1-209ENST00000511426 KDM6BO15054 1643 aa22.28■■□□□ 1.16
SCLT1-209ENST00000511426 MAP3K4Q9Y6R4 1608 aa22.27■■□□□ 1.16
SCLT1-209ENST00000511426 TRAPPC8Q9Y2L5 1435 aa22.25■■□□□ 1.15
SCLT1-209ENST00000511426 DUOX2Q9NRD8 1548 aa22.25■■□□□ 1.15
SCLT1-209ENST00000511426 TIMELESSQ9UNS1 1208 aa22.24■■□□□ 1.15
SCLT1-209ENST00000511426 DIP2BQ9P265 1576 aa22.23■■□□□ 1.15
SCLT1-209ENST00000511426 SCAPERQ9BY12 1400 aa22.23■■□□□ 1.15
SCLT1-209ENST00000511426 KDM5DQ9BY66 1539 aa22.23■■□□□ 1.15
SCLT1-209ENST00000511426 ZNF518AQ6AHZ1 1483 aa22.23■■□□□ 1.15
SCLT1-209ENST00000511426 ERBINQ96RT1 1412 aa22.22■■□□□ 1.15
SCLT1-209ENST00000511426 ZFYVE16Q7Z3T8 1539 aa22.22■■□□□ 1.15
SCLT1-209ENST00000511426 TRIM52Q96A61 297 aa22.2■■□□□ 1.15
SCLT1-209ENST00000511426 INO80Q9ULG1 1556 aaPredicted RBP22.2■■□□□ 1.14
SCLT1-209ENST00000511426 SPAG9O60271 1321 aaKnown RBP22.2■■□□□ 1.14
SCLT1-209ENST00000511426 MPHOSPH9Q99550 1183 aa22.17■■□□□ 1.14
SCLT1-209ENST00000511426 KDM5CP41229 1560 aa22.17■■□□□ 1.14
SCLT1-209ENST00000511426 POGZQ7Z3K3 1410 aa22.17■■□□□ 1.14
SCLT1-209ENST00000511426 ATP7AQ04656 1500 aa22.17■■□□□ 1.14
SCLT1-209ENST00000511426 DENND4BO75064 1496 aaPredicted RBP22.14■■□□□ 1.13
SCLT1-209ENST00000511426 PZPP20742 1482 aa22.14■■□□□ 1.13
SCLT1-209ENST00000511426 TEX14Q8IWB6 1497 aa22.14■■□□□ 1.13
SCLT1-209ENST00000511426 UNC13BO14795 1591 aa22.14■■□□□ 1.13
SCLT1-209ENST00000511426 MLH3Q9UHC1 1453 aa22.13■■□□□ 1.13
SCLT1-209ENST00000511426 AFAP1Q8N556 730 aa22.12■■□□□ 1.13
SCLT1-209ENST00000511426 MAGI2Q86UL8 1455 aa22.11■■□□□ 1.13
SCLT1-209ENST00000511426 FAM69CQ0P6D2 419 aa22.1■■□□□ 1.13
SCLT1-209ENST00000511426 SLC4A1APQ9BWU0 796 aaKnown RBP22.1■■□□□ 1.13
SCLT1-209ENST00000511426 EIF2AK4Q9P2K8 1649 aaKnown RBP22.09■■□□□ 1.13
SCLT1-209ENST00000511426 HECW2Q9P2P5 1572 aa22.08■■□□□ 1.12
SCLT1-209ENST00000511426 NUP155O75694 1391 aa22.08■■□□□ 1.12
SCLT1-209ENST00000511426 KIDINS220Q9ULH0 1771 aa22.05■■□□□ 1.12
SCLT1-209ENST00000511426 IQGAP3Q86VI3 1631 aa22.04■■□□□ 1.12
SCLT1-209ENST00000511426 ANKRD30BQ9BXX2 1392 aa22.04■■□□□ 1.12
SCLT1-209ENST00000511426 DHX29Q7Z478 1369 aaKnown RBP22.04■■□□□ 1.12
SCLT1-209ENST00000511426 FAM135AQ9P2D6 1515 aa22.03■■□□□ 1.12
SCLT1-209ENST00000511426 DEPDC5O75140 1603 aa22.02■■□□□ 1.12
SCLT1-209ENST00000511426 PPRC1Q5VV67 1664 aaKnown RBP22.01■■□□□ 1.11
SCLT1-209ENST00000511426 RICTORQ6R327 1708 aa22.01■■□□□ 1.11
SCLT1-209ENST00000511426 SIN3AQ96ST3 1273 aa22.01■■□□□ 1.11
SCLT1-209ENST00000511426 TONSLQ96HA7 1378 aa22■■□□□ 1.11
SCLT1-209ENST00000511426 ZMYM4Q5VZL5 1548 aa22■■□□□ 1.11
SCLT1-209ENST00000511426 KIF13AQ9H1H9 1805 aa22■■□□□ 1.11
SCLT1-209ENST00000511426 RPRD2Q5VT52 1461 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms