RNA–Protein interactions for RNA: ENST00000511298.1

CDS1-202, Transcript of CDP-diacylglycerol synthase 1, humanhuman

TSL 5

Gene CDS1, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDS1-202ENST00000511298 ARHGAP5Q13017 1502 aa34.64■■■■□ 3.14
CDS1-202ENST00000511298 GPATCH8Q9UKJ3 1502 aaKnown RBP34.6■■■■□ 3.13
CDS1-202ENST00000511298 POGZQ7Z3K3 1410 aa34.58■■■■□ 3.13
CDS1-202ENST00000511298 EHBP1L1Q8N3D4 1523 aa34.55■■■■□ 3.12
CDS1-202ENST00000511298 RICTORQ6R327 1708 aa34.55■■■■□ 3.12
CDS1-202ENST00000511298 CCNB3Q8WWL7 1395 aa34.55■■■■□ 3.12
CDS1-202ENST00000511298 PREX2Q70Z35 1606 aa34.54■■■■□ 3.12
CDS1-202ENST00000511298 CDC42BPBQ9Y5S2 1711 aa34.53■■■■□ 3.12
CDS1-202ENST00000511298 TIAM1Q13009 1591 aa34.53■■■■□ 3.12
CDS1-202ENST00000511298 AFAP1Q8N556 730 aa34.52■■■■□ 3.12
CDS1-202ENST00000511298 ZMYM4Q5VZL5 1548 aa34.51■■■■□ 3.12
CDS1-202ENST00000511298 CFDP1Q9UEE9 299 aaPredicted RBP34.51■■■■□ 3.12
CDS1-202ENST00000511298 MAGI2Q86UL8 1455 aa34.51■■■■□ 3.11
CDS1-202ENST00000511298 MAP3K1Q13233 1512 aa34.5■■■■□ 3.11
CDS1-202ENST00000511298 ARHGEF12Q9NZN5 1544 aa34.47■■■■□ 3.11
CDS1-202ENST00000511298 ZNF777Q9ULD5 760 aaPredicted RBP34.47■■■■□ 3.11
CDS1-202ENST00000511298 CDC42BPAQ5VT25 1732 aa34.47■■■■□ 3.11
CDS1-202ENST00000511298 KANK4Q5T7N3 995 aaPredicted RBP34.46■■■■□ 3.11
CDS1-202ENST00000511298 YEATS2Q9ULM3 1422 aa34.46■■■■□ 3.11
CDS1-202ENST00000511298 ZNF518AQ6AHZ1 1483 aa34.46■■■■□ 3.11
CDS1-202ENST00000511298 LRRC9Q6ZRR7 1453 aa34.46■■■■□ 3.11
CDS1-202ENST00000511298 TRAPPC8Q9Y2L5 1435 aa34.43■■■■□ 3.1
CDS1-202ENST00000511298 ABCC1P33527 1531 aa34.43■■■■□ 3.1
CDS1-202ENST00000511298 NCOA2Q15596 1464 aa34.41■■■■□ 3.1
CDS1-202ENST00000511298 ARHGEF40Q8TER5 1519 aa34.4■■■■□ 3.1
CDS1-202ENST00000511298 ZFYVE16Q7Z3T8 1539 aa34.4■■■■□ 3.1
CDS1-202ENST00000511298 KIAA1107Q9UPP5 1409 aa34.38■■■■□ 3.09
CDS1-202ENST00000511298 KDM5CP41229 1560 aa34.37■■■■□ 3.09
CDS1-202ENST00000511298 HNRNPMP52272 730 aaKnown RBP eCLIP34.37■■■■□ 3.09
CDS1-202ENST00000511298 SAMD9LQ8IVG5 1584 aa34.36■■■■□ 3.09
CDS1-202ENST00000511298 APLP2Q06481 763 aa34.36■■■■□ 3.09
CDS1-202ENST00000511298 ZNF644Q9H582 1327 aaPredicted RBP34.34■■■■□ 3.09
CDS1-202ENST00000511298 PLEKHH2Q8IVE3 1493 aa34.34■■■■□ 3.09
CDS1-202ENST00000511298 MLH3Q9UHC1 1453 aa34.33■■■■□ 3.09
CDS1-202ENST00000511298 ARID4BQ4LE39 1312 aaPredicted RBP34.33■■■■□ 3.09
CDS1-202ENST00000511298 ATP10AO60312 1499 aa34.33■■■■□ 3.09
CDS1-202ENST00000511298 SUPT6HQ7KZ85 1726 aaKnown RBP34.31■■■■□ 3.08
CDS1-202ENST00000511298 MYT1LQ9UL68 1186 aa34.28■■■■□ 3.08
CDS1-202ENST00000511298 ITSN2Q9NZM3 1697 aa34.28■■■■□ 3.08
CDS1-202ENST00000511298 SYCP2Q9BX26 1530 aa34.27■■■■□ 3.08
CDS1-202ENST00000511298 C9orf84Q5VXU9 1444 aa34.24■■■■□ 3.07
CDS1-202ENST00000511298 MBD5Q9P267 1494 aa34.23■■■■□ 3.07
CDS1-202ENST00000511298 HECW2Q9P2P5 1572 aa34.22■■■■□ 3.07
CDS1-202ENST00000511298 SPAG9O60271 1321 aaKnown RBP34.22■■■■□ 3.07
CDS1-202ENST00000511298 ADAMTSL3P82987 1691 aa34.17■■■■□ 3.06
CDS1-202ENST00000511298 RSPH4AQ5TD94 716 aa34.16■■■■□ 3.06
CDS1-202ENST00000511298 DIP2CQ9Y2E4 1556 aa34.15■■■■□ 3.06
CDS1-202ENST00000511298 BCORL1Q5H9F3 1711 aa34.15■■■■□ 3.06
CDS1-202ENST00000511298 SIGLEC1Q9BZZ2 1709 aa34.15■■■■□ 3.06
CDS1-202ENST00000511298 MYOM3Q5VTT5 1437 aa34.13■■■■□ 3.05
CDS1-202ENST00000511298 CAMSAP2Q08AD1 1489 aa34.13■■■■□ 3.05
CDS1-202ENST00000511298 MIA2Q96PC5 1412 aa34.13■■■■□ 3.05
CDS1-202ENST00000511298 REREQ9P2R6 1566 aa34.11■■■■□ 3.05
CDS1-202ENST00000511298 KIDINS220Q9ULH0 1771 aa34.11■■■■□ 3.05
CDS1-202ENST00000511298 MLECQ14165 292 aa34.11■■■■□ 3.05
CDS1-202ENST00000511298 ABCA6Q8N139 1617 aa34.1■■■■□ 3.05
CDS1-202ENST00000511298 PTPRMP28827 1452 aa34.07■■■■□ 3.04
CDS1-202ENST00000511298 RTEL1-TNFRSF6BF6WH68 1400 aa34.06■■■■□ 3.04
CDS1-202ENST00000511298 AGLP35573 1532 aa34.04■■■■□ 3.04
CDS1-202ENST00000511298 ATP7AQ04656 1500 aa34.04■■■■□ 3.04
CDS1-202ENST00000511298 CCDC141Q6ZP82 1450 aa34.03■■■■□ 3.04
CDS1-202ENST00000511298 INO80Q9ULG1 1556 aaPredicted RBP34.02■■■■□ 3.04
CDS1-202ENST00000511298 MADDQ8WXG6 1647 aa34.01■■■■□ 3.04
CDS1-202ENST00000511298 TSPY4P0CV99 314 aa33.98■■■■□ 3.03
CDS1-202ENST00000511298 TSPY10P0CW01 314 aa33.98■■■■□ 3.03
CDS1-202ENST00000511298 ARHGEF5Q12774 1597 aa33.98■■■■□ 3.03
CDS1-202ENST00000511298 A2MP01023 1474 aa33.95■■■■□ 3.03
CDS1-202ENST00000511298 FGD6Q6ZV73 1430 aa33.92■■■■□ 3.02
CDS1-202ENST00000511298 DHX29Q7Z478 1369 aaKnown RBP33.9■■■■□ 3.02
CDS1-202ENST00000511298 PLXNC1O60486 1568 aa33.88■■■■□ 3.01
CDS1-202ENST00000511298 TCOF1Q13428 1488 aaKnown RBP33.87■■■■□ 3.01
CDS1-202ENST00000511298 RIMS1Q86UR5 1692 aaKnown RBP33.87■■■■□ 3.01
CDS1-202ENST00000511298 PTPN23Q9H3S7 1636 aa33.82■■■■□ 3.01
CDS1-202ENST00000511298 ABCC5O15440 1437 aa33.82■■■■□ 3
CDS1-202ENST00000511298 CEBPAP49715 358 aaPredicted RBP33.8■■■■□ 3
CDS1-202ENST00000511298 PLPPR3Q6T4P5 718 aa33.79■■■■□ 3
CDS1-202ENST00000511298 ESF1Q9H501 851 aaKnown RBP33.79■■■■□ 3
CDS1-202ENST00000511298 MAST1Q9Y2H9 1570 aa33.79■■■■□ 3
CDS1-202ENST00000511298 ADGBQ8N7X0 1667 aa33.78■■■■□ 3
CDS1-202ENST00000511298 GGT6Q6P531 493 aa33.78■■■■□ 3
CDS1-202ENST00000511298 PPP6R1Q9UPN7 881 aa33.78■■■■□ 3
CDS1-202ENST00000511298 FER1L4A9Z1Z3 1794 aa33.77■■■■□ 3
CDS1-202ENST00000511298 PPARGC1BQ86YN6 1023 aaKnown RBP33.75■■■□□ 2.99
CDS1-202ENST00000511298 CNTLNQ9NXG0 1405 aa33.75■■■□□ 2.99
CDS1-202ENST00000511298 DAPK1P53355 1430 aa33.74■■■□□ 2.99
CDS1-202ENST00000511298 KIF3BO15066 747 aa33.74■■■□□ 2.99
CDS1-202ENST00000511298 SHANK2Q9UPX8 1470 aa33.71■■■□□ 2.99
CDS1-202ENST00000511298 FAM50AQ14320 339 aaKnown RBP33.7■■■□□ 2.99
CDS1-202ENST00000511298 ZMYM3Q14202 1370 aa33.67■■■□□ 2.98
CDS1-202ENST00000511298 DNMT1P26358 1616 aaKnown RBP33.65■■■□□ 2.98
CDS1-202ENST00000511298 RRP7BPQ9NSQ0 103 aa33.63■■■□□ 2.97
CDS1-202ENST00000511298 LMTK3Q96Q04 1460 aa33.63■■■□□ 2.97
CDS1-202ENST00000511298 CHIC2Q9UKJ5 165 aa33.62■■■□□ 2.97
CDS1-202ENST00000511298 KIF15Q9NS87 1388 aa33.61■■■□□ 2.97
CDS1-202ENST00000511298 ANKRD30AQ9BXX3 1397 aa33.58■■■□□ 2.97
CDS1-202ENST00000511298 DUOX2Q9NRD8 1548 aa33.58■■■□□ 2.97
CDS1-202ENST00000511298 NCOA1Q15788 1441 aa33.56■■■□□ 2.96
CDS1-202ENST00000511298 CROCC2H7BZ55 1655 aa33.56■■■□□ 2.96
CDS1-202ENST00000511298 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.54■■■□□ 2.96
CDS1-202ENST00000511298 C3P01024 1663 aa33.54■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms