RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 HNRNPUQ00839 825 aaKnown RBP eCLIP12.56□□□□□ -0.4
SNF8-210ENST00000511214 NCBP3Q53F19 620 aaKnown RBP12.56□□□□□ -0.4
SNF8-210ENST00000511214 CDK11AQ9UQ88 783 aaPredicted RBP12.56□□□□□ -0.4
SNF8-210ENST00000511214 WDR62O43379 1518 aa12.56□□□□□ -0.4
SNF8-210ENST00000511214 TDRD9Q8NDG6 1382 aaKnown RBP12.56□□□□□ -0.4
SNF8-210ENST00000511214 RPRD2Q5VT52 1461 aaKnown RBP12.55□□□□□ -0.4
SNF8-210ENST00000511214 POLR1AO95602 1720 aaPredicted RBP12.55□□□□□ -0.4
SNF8-210ENST00000511214 CCDC7Q96M83 1385 aa12.55□□□□□ -0.4
SNF8-210ENST00000511214 CNKSR2Q8WXI2 1034 aa12.54□□□□□ -0.4
SNF8-210ENST00000511214 PPP4R2Q9NY27 417 aa12.54□□□□□ -0.4
SNF8-210ENST00000511214 MPHOSPH9Q99550 1183 aa12.53□□□□□ -0.4
SNF8-210ENST00000511214 ANKRD30BQ9BXX2 1392 aa12.53□□□□□ -0.4
SNF8-210ENST00000511214 ADAMTS12P58397 1594 aa12.52□□□□□ -0.4
SNF8-210ENST00000511214 DNMT1P26358 1616 aaKnown RBP12.52□□□□□ -0.4
SNF8-210ENST00000511214 PBRM1Q86U86 1689 aa12.52□□□□□ -0.4
SNF8-210ENST00000511214 MYT1LQ9UL68 1186 aa12.52□□□□□ -0.41
SNF8-210ENST00000511214 ZBED9Q6R2W3 1325 aa12.52□□□□□ -0.41
SNF8-210ENST00000511214 TEX14Q8IWB6 1497 aa12.52□□□□□ -0.41
SNF8-210ENST00000511214 KDM6BO15054 1643 aa12.51□□□□□ -0.41
SNF8-210ENST00000511214 PRKRIP1Q9H875 184 aaPredicted RBP12.5□□□□□ -0.41
SNF8-210ENST00000511214 RRP7BPQ9NSQ0 103 aa12.5□□□□□ -0.41
SNF8-210ENST00000511214 DAPK1P53355 1430 aa12.5□□□□□ -0.41
SNF8-210ENST00000511214 SPATA31E1Q6ZUB1 1445 aa12.5□□□□□ -0.41
SNF8-210ENST00000511214 L3MBTL2Q969R5 705 aa12.49□□□□□ -0.41
SNF8-210ENST00000511214 ARID4BQ4LE39 1312 aaPredicted RBP12.48□□□□□ -0.41
SNF8-210ENST00000511214 DMRT2Q9Y5R5 561 aa12.48□□□□□ -0.41
SNF8-210ENST00000511214 ABCC5O15440 1437 aa12.46□□□□□ -0.41
SNF8-210ENST00000511214 CDK13Q14004 1512 aaKnown RBP12.46□□□□□ -0.42
SNF8-210ENST00000511214 MBD5Q9P267 1494 aa12.45□□□□□ -0.42
SNF8-210ENST00000511214 CHIC2Q9UKJ5 165 aa12.44□□□□□ -0.42
SNF8-210ENST00000511214 ADGRL2O95490 1459 aa12.44□□□□□ -0.42
SNF8-210ENST00000511214 SMG6Q86US8 1419 aaKnown RBP12.44□□□□□ -0.42
SNF8-210ENST00000511214 KIAA0586Q9BVV6 1533 aa12.43□□□□□ -0.42
SNF8-210ENST00000511214 KIAA0556O60303 1618 aa12.43□□□□□ -0.42
SNF8-210ENST00000511214 ADGBQ8N7X0 1667 aa12.42□□□□□ -0.42
SNF8-210ENST00000511214 MRS2Q9HD23 443 aa12.42□□□□□ -0.42
SNF8-210ENST00000511214 ROCK2O75116 1388 aaKnown RBP12.42□□□□□ -0.42
SNF8-210ENST00000511214 ITSN2Q9NZM3 1697 aa12.42□□□□□ -0.42
SNF8-210ENST00000511214 KIF7Q2M1P5 1343 aa12.41□□□□□ -0.42
SNF8-210ENST00000511214 BCL11AQ9H165 835 aa12.41□□□□□ -0.42
SNF8-210ENST00000511214 RAPGEF6Q8TEU7 1601 aa12.4□□□□□ -0.42
SNF8-210ENST00000511214 PZPP20742 1482 aa12.4□□□□□ -0.42
SNF8-210ENST00000511214 MRC2Q9UBG0 1479 aa12.4□□□□□ -0.42
SNF8-210ENST00000511214 RNF123Q5XPI4 1314 aa12.4□□□□□ -0.42
SNF8-210ENST00000511214 C11orf95C9JLR9 678 aaPredicted RBP12.4□□□□□ -0.42
SNF8-210ENST00000511214 NPM3O75607 178 aaKnown RBP12.4□□□□□ -0.42
SNF8-210ENST00000511214 NBPF8Q3BBV2 869 aa12.4□□□□□ -0.42
SNF8-210ENST00000511214 ERICH6Q7L0X2 663 aa12.4□□□□□ -0.42
SNF8-210ENST00000511214 KIF14Q15058 1648 aa12.4□□□□□ -0.42
SNF8-210ENST00000511214 ADCY10Q96PN6 1610 aa12.4□□□□□ -0.42
SNF8-210ENST00000511214 NUP153P49790 1475 aaKnown RBP12.4□□□□□ -0.43
SNF8-210ENST00000511214 KIAA1107Q9UPP5 1409 aa12.39□□□□□ -0.43
SNF8-210ENST00000511214 DISP1Q96F81 1524 aa12.39□□□□□ -0.43
SNF8-210ENST00000511214 IFT140Q96RY7 1462 aa12.39□□□□□ -0.43
SNF8-210ENST00000511214 TROQ12816 1431 aaPredicted RBP12.38□□□□□ -0.43
SNF8-210ENST00000511214 UHRF1BP1Q6BDS2 1440 aa12.38□□□□□ -0.43
SNF8-210ENST00000511214 DHX29Q7Z478 1369 aaKnown RBP12.38□□□□□ -0.43
SNF8-210ENST00000511214 KTN1Q86UP2 1357 aaKnown RBP12.38□□□□□ -0.43
SNF8-210ENST00000511214 CCDC184Q52MB2 194 aa12.37□□□□□ -0.43
SNF8-210ENST00000511214 SLC4A1APQ9BWU0 796 aaKnown RBP12.37□□□□□ -0.43
SNF8-210ENST00000511214 CROCC2H7BZ55 1655 aa12.37□□□□□ -0.43
SNF8-210ENST00000511214 ARHGEF12Q9NZN5 1544 aa12.37□□□□□ -0.43
SNF8-210ENST00000511214 CAMSAP2Q08AD1 1489 aa12.36□□□□□ -0.43
SNF8-210ENST00000511214 KDM5CP41229 1560 aa12.35□□□□□ -0.43
SNF8-210ENST00000511214 FAM9BQ8IZU0 186 aa12.35□□□□□ -0.43
SNF8-210ENST00000511214 NUDCQ9Y266 331 aa12.35□□□□□ -0.43
SNF8-210ENST00000511214 RALGAPBQ86X10 1494 aa12.34□□□□□ -0.43
SNF8-210ENST00000511214 SHANK2Q9UPX8 1470 aa12.34□□□□□ -0.43
SNF8-210ENST00000511214 KDM5DQ9BY66 1539 aa12.34□□□□□ -0.43
SNF8-210ENST00000511214 IRX6P78412 446 aaPredicted RBP12.34□□□□□ -0.43
SNF8-210ENST00000511214 ANKRD30AQ9BXX3 1397 aa12.33□□□□□ -0.44
SNF8-210ENST00000511214 GPATCH8Q9UKJ3 1502 aaKnown RBP12.32□□□□□ -0.44
SNF8-210ENST00000511214 USP47Q96K76 1375 aa12.32□□□□□ -0.44
SNF8-210ENST00000511214 GRIN2AQ12879 1464 aa12.31□□□□□ -0.44
SNF8-210ENST00000511214 BCORL1Q5H9F3 1711 aa12.3□□□□□ -0.44
SNF8-210ENST00000511214 KIF15Q9NS87 1388 aa12.3□□□□□ -0.44
SNF8-210ENST00000511214 RNF216Q9NWF9 866 aaPredicted RBP12.29□□□□□ -0.44
SNF8-210ENST00000511214 BRD4O60885 1362 aaPredicted RBP12.29□□□□□ -0.44
SNF8-210ENST00000511214 INSRP06213 1382 aa12.29□□□□□ -0.44
SNF8-210ENST00000511214 B4GALNT3Q6L9W6 998 aa12.28□□□□□ -0.44
SNF8-210ENST00000511214 CFDP1Q9UEE9 299 aaPredicted RBP12.28□□□□□ -0.44
SNF8-210ENST00000511214 LRPPRCP42704 1394 aaKnown RBP12.28□□□□□ -0.44
SNF8-210ENST00000511214 MAGI1Q96QZ7 1491 aaPredicted RBP12.27□□□□□ -0.44
SNF8-210ENST00000511214 RALBP1Q15311 655 aa12.27□□□□□ -0.45
SNF8-210ENST00000511214 ZNF644Q9H582 1327 aaPredicted RBP12.27□□□□□ -0.45
SNF8-210ENST00000511214 ANKRD50Q9ULJ7 1429 aa12.27□□□□□ -0.45
SNF8-210ENST00000511214 ZMYM4Q5VZL5 1548 aa12.27□□□□□ -0.45
SNF8-210ENST00000511214 PNISRQ8TF01 805 aaKnown RBP12.26□□□□□ -0.45
SNF8-210ENST00000511214 NOP58Q9Y2X3 529 aaKnown RBP12.26□□□□□ -0.45
SNF8-210ENST00000511214 PTPRGP23470 1445 aa12.26□□□□□ -0.45
SNF8-210ENST00000511214 PRG4Q92954 1404 aaPredicted RBP12.26□□□□□ -0.45
SNF8-210ENST00000511214 CARMIL2Q6F5E8 1435 aa12.25□□□□□ -0.45
SNF8-210ENST00000511214 CEP170Q5SW79 1584 aa12.25□□□□□ -0.45
SNF8-210ENST00000511214 E9PCH4 1651 aa12.25□□□□□ -0.45
SNF8-210ENST00000511214 HOXD11P31277 338 aaPredicted RBP12.24□□□□□ -0.45
SNF8-210ENST00000511214 ARHGEF5Q12774 1597 aa12.24□□□□□ -0.45
SNF8-210ENST00000511214 PKD2Q13563 968 aa12.24□□□□□ -0.45
SNF8-210ENST00000511214 ABCC10Q5T3U5 1492 aa12.23□□□□□ -0.45
SNF8-210ENST00000511214 MYBBP1AQ9BQG0 1328 aaKnown RBP12.23□□□□□ -0.45
SNF8-210ENST00000511214 PDE3BQ13370 1112 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms