RNA–Protein interactions for RNA: ENST00000511162.1

SERF1A-206, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 4

Gene SERF1A, Length 328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-206ENST00000511162 LRRC9Q6ZRR7 1453 aa34.39■■■■□ 3.1
SERF1A-206ENST00000511162 GPATCH8Q9UKJ3 1502 aaKnown RBP34.35■■■■□ 3.09
SERF1A-206ENST00000511162 ADGRL1O94910 1474 aa34.35■■■■□ 3.09
SERF1A-206ENST00000511162 CDC42BPAQ5VT25 1732 aa34.34■■■■□ 3.09
SERF1A-206ENST00000511162 CDC42BPBQ9Y5S2 1711 aa34.34■■■■□ 3.09
SERF1A-206ENST00000511162 CCNB3Q8WWL7 1395 aa34.34■■■■□ 3.09
SERF1A-206ENST00000511162 DENND4BO75064 1496 aaPredicted RBP34.33■■■■□ 3.09
SERF1A-206ENST00000511162 RAPGEF3O95398 923 aa34.33■■■■□ 3.09
SERF1A-206ENST00000511162 FRMPD1Q5SYB0 1578 aa34.32■■■■□ 3.09
SERF1A-206ENST00000511162 APLP2Q06481 763 aa34.31■■■■□ 3.08
SERF1A-206ENST00000511162 KANK4Q5T7N3 995 aaPredicted RBP34.31■■■■□ 3.08
SERF1A-206ENST00000511162 NCOA2Q15596 1464 aa34.3■■■■□ 3.08
SERF1A-206ENST00000511162 SUPT6HQ7KZ85 1726 aaKnown RBP34.3■■■■□ 3.08
SERF1A-206ENST00000511162 SCAPERQ9BY12 1400 aa34.3■■■■□ 3.08
SERF1A-206ENST00000511162 POGZQ7Z3K3 1410 aa34.25■■■■□ 3.07
SERF1A-206ENST00000511162 RICTORQ6R327 1708 aa34.24■■■■□ 3.07
SERF1A-206ENST00000511162 CFDP1Q9UEE9 299 aaPredicted RBP34.22■■■■□ 3.07
SERF1A-206ENST00000511162 ABCC1P33527 1531 aa34.21■■■■□ 3.07
SERF1A-206ENST00000511162 ITSN2Q9NZM3 1697 aa34.19■■■■□ 3.06
SERF1A-206ENST00000511162 ZNF777Q9ULD5 760 aaPredicted RBP34.18■■■■□ 3.06
SERF1A-206ENST00000511162 ZMYM4Q5VZL5 1548 aa34.18■■■■□ 3.06
SERF1A-206ENST00000511162 SAMD9LQ8IVG5 1584 aa34.18■■■■□ 3.06
SERF1A-206ENST00000511162 ARHGEF12Q9NZN5 1544 aa34.16■■■■□ 3.06
SERF1A-206ENST00000511162 ZNF518AQ6AHZ1 1483 aa34.14■■■■□ 3.06
SERF1A-206ENST00000511162 SYCP2Q9BX26 1530 aa34.1■■■■□ 3.05
SERF1A-206ENST00000511162 PLEKHH2Q8IVE3 1493 aa34.1■■■■□ 3.05
SERF1A-206ENST00000511162 TRAPPC8Q9Y2L5 1435 aa34.1■■■■□ 3.05
SERF1A-206ENST00000511162 KDM5CP41229 1560 aa34.09■■■■□ 3.05
SERF1A-206ENST00000511162 ARHGEF40Q8TER5 1519 aa34.09■■■■□ 3.05
SERF1A-206ENST00000511162 KIAA1107Q9UPP5 1409 aa34.08■■■■□ 3.05
SERF1A-206ENST00000511162 AFAP1Q8N556 730 aa34.08■■■■□ 3.05
SERF1A-206ENST00000511162 MAGI2Q86UL8 1455 aa34.07■■■■□ 3.05
SERF1A-206ENST00000511162 ZNF644Q9H582 1327 aaPredicted RBP34.06■■■■□ 3.04
SERF1A-206ENST00000511162 ZFYVE16Q7Z3T8 1539 aa34.05■■■■□ 3.04
SERF1A-206ENST00000511162 MYOM3Q5VTT5 1437 aa34.04■■■■□ 3.04
SERF1A-206ENST00000511162 YEATS2Q9ULM3 1422 aa34.04■■■■□ 3.04
SERF1A-206ENST00000511162 HNRNPMP52272 730 aaKnown RBP eCLIP34.01■■■■□ 3.03
SERF1A-206ENST00000511162 CAMSAP2Q08AD1 1489 aa34.01■■■■□ 3.03
SERF1A-206ENST00000511162 HECW2Q9P2P5 1572 aa33.99■■■■□ 3.03
SERF1A-206ENST00000511162 MIA2Q96PC5 1412 aa33.96■■■■□ 3.03
SERF1A-206ENST00000511162 MBD5Q9P267 1494 aa33.96■■■■□ 3.03
SERF1A-206ENST00000511162 MLH3Q9UHC1 1453 aa33.96■■■■□ 3.03
SERF1A-206ENST00000511162 ADAMTSL3P82987 1691 aa33.93■■■■□ 3.02
SERF1A-206ENST00000511162 MYT1LQ9UL68 1186 aa33.9■■■■□ 3.02
SERF1A-206ENST00000511162 SPAG9O60271 1321 aaKnown RBP33.88■■■■□ 3.01
SERF1A-206ENST00000511162 ATP10AO60312 1499 aa33.88■■■■□ 3.01
SERF1A-206ENST00000511162 BCORL1Q5H9F3 1711 aa33.87■■■■□ 3.01
SERF1A-206ENST00000511162 DIP2CQ9Y2E4 1556 aa33.87■■■■□ 3.01
SERF1A-206ENST00000511162 CCDC141Q6ZP82 1450 aa33.86■■■■□ 3.01
SERF1A-206ENST00000511162 C9orf84Q5VXU9 1444 aa33.86■■■■□ 3.01
SERF1A-206ENST00000511162 FGD6Q6ZV73 1430 aa33.86■■■■□ 3.01
SERF1A-206ENST00000511162 ABCA6Q8N139 1617 aa33.86■■■■□ 3.01
SERF1A-206ENST00000511162 KIDINS220Q9ULH0 1771 aa33.85■■■■□ 3.01
SERF1A-206ENST00000511162 INO80Q9ULG1 1556 aaPredicted RBP33.84■■■■□ 3.01
SERF1A-206ENST00000511162 ATP7AQ04656 1500 aa33.84■■■■□ 3.01
SERF1A-206ENST00000511162 ARHGEF5Q12774 1597 aa33.83■■■■□ 3.01
SERF1A-206ENST00000511162 ARID4BQ4LE39 1312 aaPredicted RBP33.81■■■■□ 3
SERF1A-206ENST00000511162 PTPN23Q9H3S7 1636 aa33.8■■■■□ 3
SERF1A-206ENST00000511162 SIGLEC1Q9BZZ2 1709 aa33.8■■■■□ 3
SERF1A-206ENST00000511162 RSPH4AQ5TD94 716 aa33.8■■■■□ 3
SERF1A-206ENST00000511162 PPARGC1BQ86YN6 1023 aaKnown RBP33.8■■■■□ 3
SERF1A-206ENST00000511162 REREQ9P2R6 1566 aa33.77■■■■□ 3
SERF1A-206ENST00000511162 TCOF1Q13428 1488 aaKnown RBP33.77■■■■□ 3
SERF1A-206ENST00000511162 MADDQ8WXG6 1647 aa33.75■■■□□ 2.99
SERF1A-206ENST00000511162 RTEL1-TNFRSF6BF6WH68 1400 aa33.75■■■□□ 2.99
SERF1A-206ENST00000511162 PTPRMP28827 1452 aa33.75■■■□□ 2.99
SERF1A-206ENST00000511162 TSPY4P0CV99 314 aa33.67■■■□□ 2.98
SERF1A-206ENST00000511162 TSPY10P0CW01 314 aa33.67■■■□□ 2.98
SERF1A-206ENST00000511162 AGLP35573 1532 aa33.66■■■□□ 2.98
SERF1A-206ENST00000511162 MAST1Q9Y2H9 1570 aa33.64■■■□□ 2.98
SERF1A-206ENST00000511162 A2MP01023 1474 aa33.64■■■□□ 2.98
SERF1A-206ENST00000511162 ABCC5O15440 1437 aa33.63■■■□□ 2.97
SERF1A-206ENST00000511162 RIMS1Q86UR5 1692 aaKnown RBP33.63■■■□□ 2.97
SERF1A-206ENST00000511162 PLXNC1O60486 1568 aa33.63■■■□□ 2.97
SERF1A-206ENST00000511162 DAPK1P53355 1430 aa33.62■■■□□ 2.97
SERF1A-206ENST00000511162 DNMT1P26358 1616 aaKnown RBP33.62■■■□□ 2.97
SERF1A-206ENST00000511162 MLECQ14165 292 aa33.62■■■□□ 2.97
SERF1A-206ENST00000511162 SHANK2Q9UPX8 1470 aa33.62■■■□□ 2.97
SERF1A-206ENST00000511162 FAM50AQ14320 339 aaKnown RBP33.6■■■□□ 2.97
SERF1A-206ENST00000511162 ADGBQ8N7X0 1667 aa33.6■■■□□ 2.97
SERF1A-206ENST00000511162 CROCC2H7BZ55 1655 aa33.58■■■□□ 2.97
SERF1A-206ENST00000511162 DHX29Q7Z478 1369 aaKnown RBP33.54■■■□□ 2.96
SERF1A-206ENST00000511162 FER1L4A9Z1Z3 1794 aa33.52■■■□□ 2.96
SERF1A-206ENST00000511162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.46■■■□□ 2.95
SERF1A-206ENST00000511162 RRBP1Q9P2E9 1410 aaKnown RBP33.45■■■□□ 2.95
SERF1A-206ENST00000511162 KIF15Q9NS87 1388 aa33.44■■■□□ 2.94
SERF1A-206ENST00000511162 CHIC2Q9UKJ5 165 aa33.43■■■□□ 2.94
SERF1A-206ENST00000511162 LMTK3Q96Q04 1460 aa33.41■■■□□ 2.94
SERF1A-206ENST00000511162 DUOX2Q9NRD8 1548 aa33.4■■■□□ 2.94
SERF1A-206ENST00000511162 ADGRL2O95490 1459 aa33.4■■■□□ 2.94
SERF1A-206ENST00000511162 ANKRD30AQ9BXX3 1397 aa33.4■■■□□ 2.94
SERF1A-206ENST00000511162 PTPRKQ15262 1439 aa33.38■■■□□ 2.93
SERF1A-206ENST00000511162 KIF3BO15066 747 aa33.38■■■□□ 2.93
SERF1A-206ENST00000511162 RRP7BPQ9NSQ0 103 aa33.38■■■□□ 2.93
SERF1A-206ENST00000511162 NCOA1Q15788 1441 aa33.37■■■□□ 2.93
SERF1A-206ENST00000511162 GGT6Q6P531 493 aa33.37■■■□□ 2.93
SERF1A-206ENST00000511162 ESF1Q9H501 851 aaKnown RBP33.34■■■□□ 2.93
SERF1A-206ENST00000511162 EIF2AK4Q9P2K8 1649 aaKnown RBP33.33■■■□□ 2.93
SERF1A-206ENST00000511162 ERBINQ96RT1 1412 aa33.33■■■□□ 2.93
SERF1A-206ENST00000511162 CNTLNQ9NXG0 1405 aa33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms