RNA–Protein interactions for RNA: ENST00000511129.2

SCARB2-205, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-205ENST00000511129 SNPHO15079 494 aa10.47□□□□□ -0.73
SCARB2-205ENST00000511129 DPY19L2Q6NUT2 758 aa10.47□□□□□ -0.73
SCARB2-205ENST00000511129 MFRPQ9BY79 579 aa10.46□□□□□ -0.73
SCARB2-205ENST00000511129 CDAN1Q8IWY9 1227 aa10.45□□□□□ -0.74
SCARB2-205ENST00000511129 TMEM121BQ9BXQ6 578 aaPredicted RBP10.43□□□□□ -0.74
SCARB2-205ENST00000511129 PHF8Q9UPP1 1060 aa10.43□□□□□ -0.74
SCARB2-205ENST00000511129 BOLA1Q9Y3E2 137 aa10.4□□□□□ -0.74
SCARB2-205ENST00000511129 FBXO22Q8NEZ5 403 aa10.39□□□□□ -0.75
SCARB2-205ENST00000511129 G3V3G9 751 aa10.37□□□□□ -0.75
SCARB2-205ENST00000511129 KDM2AQ9Y2K7 1162 aa10.37□□□□□ -0.75
SCARB2-205ENST00000511129 MARVELD3Q96A59 401 aa10.36□□□□□ -0.75
SCARB2-205ENST00000511129 PPP1R37O75864 691 aa10.33□□□□□ -0.76
SCARB2-205ENST00000511129 MS4A4AQ96JQ5 239 aa10.32□□□□□ -0.76
SCARB2-205ENST00000511129 EMP3P54852 163 aa10.29□□□□□ -0.76
SCARB2-205ENST00000511129 HOXB3P14651 431 aaPredicted RBP10.28□□□□□ -0.76
SCARB2-205ENST00000511129 WDR70Q9NW82 654 aa10.28□□□□□ -0.76
SCARB2-205ENST00000511129 MICALL2Q8IY33 904 aa10.26□□□□□ -0.77
SCARB2-205ENST00000511129 CADPS2Q86UW7 1296 aa10.25□□□□□ -0.77
SCARB2-205ENST00000511129 POTEB3A0JP26 581 aa10.24□□□□□ -0.77
SCARB2-205ENST00000511129 POTEBQ6S5H4 581 aa10.24□□□□□ -0.77
SCARB2-205ENST00000511129 FAM205CA6NFA0 338 aa10.22□□□□□ -0.77
SCARB2-205ENST00000511129 TMEM92Q6UXU6 159 aa10.22□□□□□ -0.77
SCARB2-205ENST00000511129 HS3ST6Q96QI5 342 aa10.22□□□□□ -0.77
SCARB2-205ENST00000511129 SPNS2Q8IVW8 549 aa10.21□□□□□ -0.77
SCARB2-205ENST00000511129 PDE4AP27815 886 aa10.2□□□□□ -0.78
SCARB2-205ENST00000511129 DOK7Q18PE1 504 aa10.2□□□□□ -0.78
SCARB2-205ENST00000511129 BCANQ96GW7 911 aa10.2□□□□□ -0.78
SCARB2-205ENST00000511129 HOXB1P14653 301 aaPredicted RBP10.19□□□□□ -0.78
SCARB2-205ENST00000511129 ZNF710Q8N1W2 664 aa10.19□□□□□ -0.78
SCARB2-205ENST00000511129 MMRN1Q13201 1228 aa10.16□□□□□ -0.78
SCARB2-205ENST00000511129 LARP6Q9BRS8 491 aaKnown RBP10.16□□□□□ -0.78
SCARB2-205ENST00000511129 KRTAP3-3Q9BYR6 98 aa10.16□□□□□ -0.78
SCARB2-205ENST00000511129 KRTAP3-2Q9BYR7 98 aa10.16□□□□□ -0.78
SCARB2-205ENST00000511129 P3H3Q8IVL6 736 aa10.15□□□□□ -0.78
SCARB2-205ENST00000511129 RIMBP2O15034 1052 aa10.13□□□□□ -0.79
SCARB2-205ENST00000511129 NBR1Q14596 966 aa10.13□□□□□ -0.79
SCARB2-205ENST00000511129 NCKAP5LQ9HCH0 1330 aa10.12□□□□□ -0.79
SCARB2-205ENST00000511129 TMC2Q8TDI7 906 aa10.11□□□□□ -0.79
SCARB2-205ENST00000511129 DDX27Q96GQ7 796 aaKnown RBP10.11□□□□□ -0.79
SCARB2-205ENST00000511129 CRISPLD2Q9H0B8 497 aa10.11□□□□□ -0.79
SCARB2-205ENST00000511129 ERBB3P21860 1342 aa10.1□□□□□ -0.79
SCARB2-205ENST00000511129 ZSWIM6Q9HCJ5 1215 aa10.1□□□□□ -0.79
SCARB2-205ENST00000511129 E2F4Q16254 413 aa10.09□□□□□ -0.79
SCARB2-205ENST00000511129 GPR153Q6NV75 609 aa10.08□□□□□ -0.8
SCARB2-205ENST00000511129 GPHNQ9NQX3 736 aaPredicted RBP10.08□□□□□ -0.8
SCARB2-205ENST00000511129 MFSD10Q14728 455 aa10.07□□□□□ -0.8
SCARB2-205ENST00000511129 VARS2Q5ST30 1063 aaKnown RBP10.04□□□□□ -0.8
SCARB2-205ENST00000511129 PPP1R15BQ5SWA1 713 aa10.04□□□□□ -0.8
SCARB2-205ENST00000511129 KCNV2Q8TDN2 545 aa10.04□□□□□ -0.8
SCARB2-205ENST00000511129 C2orf72A6NCS6 295 aa10.02□□□□□ -0.81
SCARB2-205ENST00000511129 KIF3CO14782 793 aa10.02□□□□□ -0.81
SCARB2-205ENST00000511129 ARSIQ5FYB1 569 aa10.02□□□□□ -0.81
SCARB2-205ENST00000511129 ARHGEF1Q92888 912 aaKnown RBP10.02□□□□□ -0.81
SCARB2-205ENST00000511129 FOXK1P85037 733 aa10□□□□□ -0.81
SCARB2-205ENST00000511129 DSG2Q14126 1118 aa10□□□□□ -0.81
SCARB2-205ENST00000511129 ZNF687Q8N1G0 1237 aa9.99□□□□□ -0.81
SCARB2-205ENST00000511129 PLPP6Q8IY26 295 aa9.98□□□□□ -0.81
SCARB2-205ENST00000511129 KHSRPQ92945 711 aaKnown RBP eCLIP9.98□□□□□ -0.81
SCARB2-205ENST00000511129 CAMK2BQ13554 666 aa9.96□□□□□ -0.82
SCARB2-205ENST00000511129 ZNF316A6NFI3 1004 aaPredicted RBP9.93□□□□□ -0.82
SCARB2-205ENST00000511129 TULP1O00294 542 aaPredicted RBP9.92□□□□□ -0.82
SCARB2-205ENST00000511129 ARIH1Q9Y4X5 557 aaPredicted RBP9.92□□□□□ -0.82
SCARB2-205ENST00000511129 SLC34A2O95436 690 aa9.9□□□□□ -0.82
SCARB2-205ENST00000511129 NUDT7P0C024 238 aa9.89□□□□□ -0.83
SCARB2-205ENST00000511129 MAP3K9P80192 1104 aa9.89□□□□□ -0.83
SCARB2-205ENST00000511129 EMILIN3Q9NT22 766 aa9.89□□□□□ -0.83
SCARB2-205ENST00000511129 PCDHGA4Q9Y5G9 962 aa9.89□□□□□ -0.83
SCARB2-205ENST00000511129 DPYSL4O14531 572 aa9.87□□□□□ -0.83
SCARB2-205ENST00000511129 SEMA3EO15041 775 aa9.86□□□□□ -0.83
SCARB2-205ENST00000511129 UPF1Q92900 1129 aaKnown RBP eCLIP9.86□□□□□ -0.83
SCARB2-205ENST00000511129 RNF166Q96A37 237 aaPredicted RBP9.86□□□□□ -0.83
SCARB2-205ENST00000511129 SPDYE16A6NNV3 312 aaPredicted RBP9.85□□□□□ -0.83
SCARB2-205ENST00000511129 TBC1D12O60347 775 aa9.85□□□□□ -0.83
SCARB2-205ENST00000511129 SMYD5Q6GMV2 418 aa9.85□□□□□ -0.83
SCARB2-205ENST00000511129 MYT1LQ9UL68 1186 aa9.85□□□□□ -0.83
SCARB2-205ENST00000511129 LHX6Q9UPM6 363 aa9.85□□□□□ -0.83
SCARB2-205ENST00000511129 ANKRD13DQ6ZTN6 518 aa9.83□□□□□ -0.84
SCARB2-205ENST00000511129 TESPA1A2RU30 521 aaPredicted RBP9.82□□□□□ -0.84
SCARB2-205ENST00000511129 OXER1Q8TDS5 423 aa9.82□□□□□ -0.84
SCARB2-205ENST00000511129 LSM11P83369 360 aaKnown RBP eCLIP9.81□□□□□ -0.84
SCARB2-205ENST00000511129 TPRNQ4KMQ1 711 aa9.81□□□□□ -0.84
SCARB2-205ENST00000511129 PTGER2P43116 358 aa9.8□□□□□ -0.84
SCARB2-205ENST00000511129 PDIA6Q15084 440 aa9.8□□□□□ -0.84
SCARB2-205ENST00000511129 POTEEQ6S8J3 1075 aa9.8□□□□□ -0.84
SCARB2-205ENST00000511129 PTCD2Q8WV60 388 aaKnown RBP9.79□□□□□ -0.84
SCARB2-205ENST00000511129 KDM4FA0A1W2PPD8 638 aa9.78□□□□□ -0.84
SCARB2-205ENST00000511129 PBX2P40425 430 aa9.78□□□□□ -0.84
SCARB2-205ENST00000511129 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.78□□□□□ -0.84
SCARB2-205ENST00000511129 LMOD2Q6P5Q4 547 aa9.77□□□□□ -0.85
SCARB2-205ENST00000511129 AXIN2Q9Y2T1 843 aa9.77□□□□□ -0.85
SCARB2-205ENST00000511129 EVI5O60447 810 aa9.76□□□□□ -0.85
SCARB2-205ENST00000511129 PRKCSHP14314 528 aaPredicted RBP9.75□□□□□ -0.85
SCARB2-205ENST00000511129 PSDA5PKW4 1024 aaPredicted RBP9.73□□□□□ -0.85
SCARB2-205ENST00000511129 MLLT3P42568 568 aaPredicted RBP9.73□□□□□ -0.85
SCARB2-205ENST00000511129 GRXCR2A6NFK2 248 aa9.72□□□□□ -0.85
SCARB2-205ENST00000511129 NISCHQ9Y2I1 1504 aa9.71□□□□□ -0.86
SCARB2-205ENST00000511129 ARHGAP33O14559 1287 aa9.7□□□□□ -0.86
SCARB2-205ENST00000511129 DDX12PQ92771 950 aa9.7□□□□□ -0.86
SCARB2-205ENST00000511129 ANO8Q9HCE9 1232 aaPredicted RBP9.68□□□□□ -0.86
SCARB2-205ENST00000511129 RBM26Q5T8P6 1007 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms