RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 SCAPERQ9BY12 1400 aa37.89■■■■□ 3.66
SMAD5-207ENST00000511116 MYO5CQ9NQX4 1742 aa37.86■■■■□ 3.65
SMAD5-207ENST00000511116 CDK11AQ9UQ88 783 aaPredicted RBP37.82■■■■□ 3.64
SMAD5-207ENST00000511116 TROQ12816 1431 aaPredicted RBP37.81■■■■□ 3.64
SMAD5-207ENST00000511116 KIF14Q15058 1648 aa37.81■■■■□ 3.64
SMAD5-207ENST00000511116 EHMT2Q96KQ7 1210 aa37.8■■■■□ 3.64
SMAD5-207ENST00000511116 EFCAB2Q5VUJ9 269 aa37.79■■■■□ 3.64
SMAD5-207ENST00000511116 LRRIQ1Q96JM4 1722 aa37.76■■■■□ 3.64
SMAD5-207ENST00000511116 ATP1B4Q9UN42 357 aaPredicted RBP37.76■■■■□ 3.64
SMAD5-207ENST00000511116 ATP10AO60312 1499 aa37.74■■■■□ 3.63
SMAD5-207ENST00000511116 C9orf84Q5VXU9 1444 aa37.7■■■■□ 3.63
SMAD5-207ENST00000511116 KDM5CP41229 1560 aa37.7■■■■□ 3.63
SMAD5-207ENST00000511116 ARHGEF12Q9NZN5 1544 aa37.7■■■■□ 3.63
SMAD5-207ENST00000511116 FER1L4A9Z1Z3 1794 aa37.7■■■■□ 3.63
SMAD5-207ENST00000511116 ZNF518AQ6AHZ1 1483 aa37.7■■■■□ 3.63
SMAD5-207ENST00000511116 CLIP1P30622 1438 aa37.7■■■■□ 3.62
SMAD5-207ENST00000511116 FBXO41Q8TF61 875 aa37.69■■■■□ 3.62
SMAD5-207ENST00000511116 ARHGAP5Q13017 1502 aa37.65■■■■□ 3.62
SMAD5-207ENST00000511116 CASKIN1Q8WXD9 1431 aa37.62■■■■□ 3.61
SMAD5-207ENST00000511116 MLECQ14165 292 aa37.6■■■■□ 3.61
SMAD5-207ENST00000511116 CDC42BPBQ9Y5S2 1711 aa37.6■■■■□ 3.61
SMAD5-207ENST00000511116 CCDC18Q5T9S5 1454 aa37.59■■■■□ 3.61
SMAD5-207ENST00000511116 REREQ9P2R6 1566 aa37.56■■■■□ 3.6
SMAD5-207ENST00000511116 HSPA2P54652 639 aa37.56■■■■□ 3.6
SMAD5-207ENST00000511116 AFAP1Q8N556 730 aa37.56■■■■□ 3.6
SMAD5-207ENST00000511116 PREX2Q70Z35 1606 aa37.55■■■■□ 3.6
SMAD5-207ENST00000511116 DIP2CQ9Y2E4 1556 aa37.54■■■■□ 3.6
SMAD5-207ENST00000511116 MLH3Q9UHC1 1453 aa37.52■■■■□ 3.6
SMAD5-207ENST00000511116 ABCC1P33527 1531 aa37.5■■■■□ 3.59
SMAD5-207ENST00000511116 PLPPR3Q6T4P5 718 aa37.49■■■■□ 3.59
SMAD5-207ENST00000511116 ABCA6Q8N139 1617 aa37.46■■■■□ 3.59
SMAD5-207ENST00000511116 FYCO1Q9BQS8 1478 aa37.45■■■■□ 3.59
SMAD5-207ENST00000511116 PREX1Q8TCU6 1659 aa37.45■■■■□ 3.59
SMAD5-207ENST00000511116 TRAPPC8Q9Y2L5 1435 aa37.44■■■■□ 3.58
SMAD5-207ENST00000511116 ITSN2Q9NZM3 1697 aa37.43■■■■□ 3.58
SMAD5-207ENST00000511116 AGLP35573 1532 aa37.41■■■■□ 3.58
SMAD5-207ENST00000511116 CDC42BPAQ5VT25 1732 aa37.41■■■■□ 3.58
SMAD5-207ENST00000511116 CEBPAP49715 358 aaPredicted RBP37.36■■■■□ 3.57
SMAD5-207ENST00000511116 SETD1BQ9UPS6 1966 aaKnown RBP37.35■■■■□ 3.57
SMAD5-207ENST00000511116 KIDINS220Q9ULH0 1771 aa37.34■■■■□ 3.57
SMAD5-207ENST00000511116 MYT1LQ9UL68 1186 aa37.29■■■■□ 3.56
SMAD5-207ENST00000511116 GPATCH8Q9UKJ3 1502 aaKnown RBP37.26■■■■□ 3.56
SMAD5-207ENST00000511116 SAMD9LQ8IVG5 1584 aa37.26■■■■□ 3.56
SMAD5-207ENST00000511116 C3P01024 1663 aa37.26■■■■□ 3.56
SMAD5-207ENST00000511116 UHRF1BP1Q6BDS2 1440 aa37.26■■■■□ 3.55
SMAD5-207ENST00000511116 STRCQ7RTU9 1775 aa37.24■■■■□ 3.55
SMAD5-207ENST00000511116 CERKQ8TCT0 537 aa37.22■■■■□ 3.55
SMAD5-207ENST00000511116 SYCP2Q9BX26 1530 aa37.19■■■■□ 3.54
SMAD5-207ENST00000511116 CNTLNQ9NXG0 1405 aa37.17■■■■□ 3.54
SMAD5-207ENST00000511116 KIAA1107Q9UPP5 1409 aa37.17■■■■□ 3.54
SMAD5-207ENST00000511116 DMRT2Q9Y5R5 561 aa37.13■■■■□ 3.53
SMAD5-207ENST00000511116 PLEKHH2Q8IVE3 1493 aa37.12■■■■□ 3.53
SMAD5-207ENST00000511116 ZNF777Q9ULD5 760 aaPredicted RBP37.1■■■■□ 3.53
SMAD5-207ENST00000511116 SPAG9O60271 1321 aaKnown RBP37.09■■■■□ 3.53
SMAD5-207ENST00000511116 MROH2AA6NES4 1674 aa37.09■■■■□ 3.53
SMAD5-207ENST00000511116 INO80Q9ULG1 1556 aaPredicted RBP37.08■■■■□ 3.53
SMAD5-207ENST00000511116 ESF1Q9H501 851 aaKnown RBP37.08■■■■□ 3.53
SMAD5-207ENST00000511116 ATP7AQ04656 1500 aa37.08■■■■□ 3.53
SMAD5-207ENST00000511116 HNRNPMP52272 730 aaKnown RBP eCLIP37.07■■■■□ 3.523e-6■■■■■ 28.4
SMAD5-207ENST00000511116 PLXNC1O60486 1568 aa37.07■■■■□ 3.52
SMAD5-207ENST00000511116 PTPRTO14522 1441 aa37.05■■■■□ 3.52
SMAD5-207ENST00000511116 CCNB3Q8WWL7 1395 aa37.04■■■■□ 3.52
SMAD5-207ENST00000511116 CFDP1Q9UEE9 299 aaPredicted RBP37.04■■■■□ 3.52
SMAD5-207ENST00000511116 NPATQ14207 1427 aa37.03■■■■□ 3.52
SMAD5-207ENST00000511116 MTUS2Q5JR59 1369 aa37.02■■■■□ 3.52
SMAD5-207ENST00000511116 SUPT6HQ7KZ85 1726 aaKnown RBP36.99■■■■□ 3.51
SMAD5-207ENST00000511116 TIAM1Q13009 1591 aa36.97■■■■□ 3.51
SMAD5-207ENST00000511116 A2MP01023 1474 aa36.97■■■■□ 3.51
SMAD5-207ENST00000511116 NCOA1Q15788 1441 aa36.96■■■■□ 3.51
SMAD5-207ENST00000511116 ZMYM3Q14202 1370 aa36.96■■■■□ 3.51
SMAD5-207ENST00000511116 EHBP1L1Q8N3D4 1523 aa36.95■■■■□ 3.51
SMAD5-207ENST00000511116 MBD5Q9P267 1494 aa36.92■■■■□ 3.5
SMAD5-207ENST00000511116 CEP162Q5TB80 1403 aa36.91■■■■□ 3.5
SMAD5-207ENST00000511116 ADGBQ8N7X0 1667 aa36.89■■■■□ 3.5
SMAD5-207ENST00000511116 CLTCQ00610 1675 aaKnown RBP36.87■■■■□ 3.49
SMAD5-207ENST00000511116 LTBP4Q8N2S1 1624 aa36.86■■■■□ 3.49
SMAD5-207ENST00000511116 ZNF644Q9H582 1327 aaPredicted RBP36.85■■■■□ 3.49
SMAD5-207ENST00000511116 RTEL1-TNFRSF6BF6WH68 1400 aa36.85■■■■□ 3.49
SMAD5-207ENST00000511116 CAMSAP1Q5T5Y3 1602 aa36.84■■■■□ 3.49
SMAD5-207ENST00000511116 PPP6R1Q9UPN7 881 aa36.83■■■■□ 3.49
SMAD5-207ENST00000511116 PTPRKQ15262 1439 aa36.83■■■■□ 3.49
SMAD5-207ENST00000511116 ZNF142P52746 1687 aaPredicted RBP36.83■■■■□ 3.49
SMAD5-207ENST00000511116 MYO3AQ8NEV4 1616 aa36.79■■■■□ 3.48
SMAD5-207ENST00000511116 IQSEC2Q5JU85 1478 aa36.77■■■■□ 3.48
SMAD5-207ENST00000511116 PLA2R1Q13018 1463 aa36.75■■■■□ 3.47
SMAD5-207ENST00000511116 GGT6Q6P531 493 aa36.75■■■■□ 3.47
SMAD5-207ENST00000511116 DHX29Q7Z478 1369 aaKnown RBP36.73■■■■□ 3.47
SMAD5-207ENST00000511116 CEP170BQ9Y4F5 1589 aaPredicted RBP36.73■■■■□ 3.47
SMAD5-207ENST00000511116 NCOA2Q15596 1464 aa36.71■■■■□ 3.47
SMAD5-207ENST00000511116 TCOF1Q13428 1488 aaKnown RBP36.69■■■■□ 3.46
SMAD5-207ENST00000511116 CCDC141Q6ZP82 1450 aa36.69■■■■□ 3.46
SMAD5-207ENST00000511116 CAMSAP2Q08AD1 1489 aa36.66■■■■□ 3.46
SMAD5-207ENST00000511116 FAM135AQ9P2D6 1515 aa36.65■■■■□ 3.46
SMAD5-207ENST00000511116 NCKAP5LQ9HCH0 1330 aa36.64■■■■□ 3.46
SMAD5-207ENST00000511116 PKD2Q13563 968 aa36.64■■■■□ 3.46
SMAD5-207ENST00000511116 RSPH4AQ5TD94 716 aa36.63■■■■□ 3.45
SMAD5-207ENST00000511116 A2ML1A8K2U0 1454 aa36.6■■■■□ 3.45
SMAD5-207ENST00000511116 ARHGEF5Q12774 1597 aa36.59■■■■□ 3.45
SMAD5-207ENST00000511116 DNMT1P26358 1616 aaKnown RBP36.56■■■■□ 3.44
SMAD5-207ENST00000511116 KDM5DQ9BY66 1539 aa36.55■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms