RNA–Protein interactions for RNA: ENST00000511072.5

PRDM16-206, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-206ENST00000511072 FTSJ3Q8IY81 847 aaKnown RBP18.54■□□□□ 0.56
PRDM16-206ENST00000511072 HNRNPMP52272 730 aaKnown RBP eCLIP18.53■□□□□ 0.56
PRDM16-206ENST00000511072 LMOD2Q6P5Q4 547 aa18.52■□□□□ 0.55
PRDM16-206ENST00000511072 STK26Q9P289 416 aa18.51■□□□□ 0.55
PRDM16-206ENST00000511072 MAPK8IP3Q9UPT6 1336 aa18.51■□□□□ 0.55
PRDM16-206ENST00000511072 FMN1Q68DA7 1419 aa18.5■□□□□ 0.55
PRDM16-206ENST00000511072 PDS5BQ9NTI5 1447 aa18.5■□□□□ 0.55
PRDM16-206ENST00000511072 IPO9Q96P70 1041 aaKnown RBP18.48■□□□□ 0.55
PRDM16-206ENST00000511072 SRPK2P78362 688 aaKnown RBP18.47■□□□□ 0.55
PRDM16-206ENST00000511072 NUDCQ9Y266 331 aa18.47■□□□□ 0.55
PRDM16-206ENST00000511072 DHX57Q6P158 1386 aaKnown RBP18.46■□□□□ 0.55
PRDM16-206ENST00000511072 VSIG10Q8N0Z9 540 aa18.46■□□□□ 0.55
PRDM16-206ENST00000511072 BRPF3Q9ULD4 1205 aa18.46■□□□□ 0.54
PRDM16-206ENST00000511072 JPH4Q96JJ6 628 aa18.45■□□□□ 0.54
PRDM16-206ENST00000511072 MORC1Q86VD1 984 aa18.42■□□□□ 0.54
PRDM16-206ENST00000511072 KIF3BO15066 747 aa18.42■□□□□ 0.54
PRDM16-206ENST00000511072 EFCAB2Q5VUJ9 269 aa18.41■□□□□ 0.54
PRDM16-206ENST00000511072 BECN1Q14457 450 aa18.41■□□□□ 0.54
PRDM16-206ENST00000511072 CARMIL2Q6F5E8 1435 aa18.4■□□□□ 0.54
PRDM16-206ENST00000511072 NUTM2DQ5VT03 806 aaPredicted RBP18.4■□□□□ 0.54
PRDM16-206ENST00000511072 TPRNQ4KMQ1 711 aa18.39■□□□□ 0.53
PRDM16-206ENST00000511072 DDRGK1Q96HY6 314 aa18.39■□□□□ 0.53
PRDM16-206ENST00000511072 ROCK2O75116 1388 aaKnown RBP18.39■□□□□ 0.53
PRDM16-206ENST00000511072 ANKRD30AQ9BXX3 1397 aa18.37■□□□□ 0.53
PRDM16-206ENST00000511072 SMARCA4P51532 1647 aa18.36■□□□□ 0.53
PRDM16-206ENST00000511072 KANK1Q14678 1352 aa18.36■□□□□ 0.53
PRDM16-206ENST00000511072 ST20-MTHFSA0A0A6YYL1 179 aa18.36■□□□□ 0.53
PRDM16-206ENST00000511072 KTN1Q86UP2 1357 aaKnown RBP18.33■□□□□ 0.53
PRDM16-206ENST00000511072 HAP1P54257 671 aaPredicted RBP18.33■□□□□ 0.52
PRDM16-206ENST00000511072 RCAN3Q9UKA8 241 aa18.33■□□□□ 0.52
PRDM16-206ENST00000511072 IGF1RP08069 1367 aa18.33■□□□□ 0.52
PRDM16-206ENST00000511072 U2AF1L5P0DN76 240 aaPredicted RBP18.33■□□□□ 0.52
PRDM16-206ENST00000511072 U2AF1Q01081 240 aaKnown RBP eCLIP18.33■□□□□ 0.52
PRDM16-206ENST00000511072 NCLP19338 710 aaKnown RBP18.32■□□□□ 0.52
PRDM16-206ENST00000511072 PODXL2Q9NZ53 605 aa18.3■□□□□ 0.52
PRDM16-206ENST00000511072 TRHP20396 242 aaPredicted RBP18.3■□□□□ 0.52
PRDM16-206ENST00000511072 NAP1L5Q96NT1 182 aaPredicted RBP18.3■□□□□ 0.52
PRDM16-206ENST00000511072 ZNF644Q9H582 1327 aaPredicted RBP18.3■□□□□ 0.52
PRDM16-206ENST00000511072 CCDC146Q8IYE0 955 aa18.28■□□□□ 0.52
PRDM16-206ENST00000511072 FANCD2Q9BXW9 1451 aa18.27■□□□□ 0.51
PRDM16-206ENST00000511072 SPRYD3Q8NCJ5 442 aa18.26■□□□□ 0.51
PRDM16-206ENST00000511072 RSPH6AQ9H0K4 717 aa18.26■□□□□ 0.51
PRDM16-206ENST00000511072 SPAG9O60271 1321 aaKnown RBP18.26■□□□□ 0.51
PRDM16-206ENST00000511072 APBB1O00213 710 aa18.25■□□□□ 0.51
PRDM16-206ENST00000511072 CLUAP1Q96AJ1 413 aa18.25■□□□□ 0.51
PRDM16-206ENST00000511072 RALBP1Q15311 655 aa18.25■□□□□ 0.51
PRDM16-206ENST00000511072 TRAK1Q9UPV9 953 aa18.25■□□□□ 0.51
PRDM16-206ENST00000511072 NLRP13Q86W25 1043 aa18.23■□□□□ 0.51
PRDM16-206ENST00000511072 RAD54L2Q9Y4B4 1467 aa18.23■□□□□ 0.51
PRDM16-206ENST00000511072 PRKRIP1Q9H875 184 aaPredicted RBP18.23■□□□□ 0.51
PRDM16-206ENST00000511072 NUTM2FA1L443 756 aa18.23■□□□□ 0.51
PRDM16-206ENST00000511072 GSE1Q14687 1217 aa18.22■□□□□ 0.51
PRDM16-206ENST00000511072 TAOK2Q9UL54 1235 aa18.22■□□□□ 0.51
PRDM16-206ENST00000511072 GOLGA6L22H0YM25 854 aa18.2■□□□□ 0.5
PRDM16-206ENST00000511072 PANK3Q9H999 370 aa18.2■□□□□ 0.5
PRDM16-206ENST00000511072 CCDC18Q5T9S5 1454 aa18.2■□□□□ 0.5
PRDM16-206ENST00000511072 PHLDB1Q86UU1 1377 aa18.19■□□□□ 0.5
PRDM16-206ENST00000511072 WASHC2CQ9Y4E1 1318 aa18.19■□□□□ 0.5
PRDM16-206ENST00000511072 TRIM44Q96DX7 344 aaPredicted RBP18.18■□□□□ 0.5
PRDM16-206ENST00000511072 USP35Q9P2H5 1018 aa18.18■□□□□ 0.5
PRDM16-206ENST00000511072 RRP7AQ9Y3A4 280 aaKnown RBP18.18■□□□□ 0.5
PRDM16-206ENST00000511072 FGD5Q6ZNL6 1462 aa18.17■□□□□ 0.5
PRDM16-206ENST00000511072 PLIN1O60240 522 aa18.16■□□□□ 0.5
PRDM16-206ENST00000511072 HDGFL2Q7Z4V5 671 aaPredicted RBP18.16■□□□□ 0.5
PRDM16-206ENST00000511072 A0A0U1RQG5 324 aaPredicted RBP18.16■□□□□ 0.5
PRDM16-206ENST00000511072 OS9Q13438 667 aaPredicted RBP18.16■□□□□ 0.5
PRDM16-206ENST00000511072 SLC4A3P48751 1232 aa18.15■□□□□ 0.5
PRDM16-206ENST00000511072 MS4A1P11836 297 aa18.15■□□□□ 0.5
PRDM16-206ENST00000511072 GOLGA2Q08379 1002 aa18.15■□□□□ 0.5
PRDM16-206ENST00000511072 ZMYND15Q9H091 742 aa18.15■□□□□ 0.5
PRDM16-206ENST00000511072 CASC1Q6TDU7 716 aa18.14■□□□□ 0.49
PRDM16-206ENST00000511072 RSPH4AQ5TD94 716 aa18.14■□□□□ 0.49
PRDM16-206ENST00000511072 HSP90AB1P08238 724 aaKnown RBP18.13■□□□□ 0.49
PRDM16-206ENST00000511072 BCL2L13Q9BXK5 485 aa18.13■□□□□ 0.49
PRDM16-206ENST00000511072 PNNQ9H307 717 aaKnown RBP18.13■□□□□ 0.49
PRDM16-206ENST00000511072 HSP90AA2PQ14568 343 aaPredicted RBP18.13■□□□□ 0.49
PRDM16-206ENST00000511072 SLKQ9H2G2 1235 aaPredicted RBP18.12■□□□□ 0.49
PRDM16-206ENST00000511072 ITPRIPQ8IWB1 547 aa18.12■□□□□ 0.49
PRDM16-206ENST00000511072 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.11■□□□□ 0.49
PRDM16-206ENST00000511072 PTPRGP23470 1445 aa18.11■□□□□ 0.49
PRDM16-206ENST00000511072 HDGFP51858 240 aaKnown RBP18.11■□□□□ 0.49
PRDM16-206ENST00000511072 USP47Q96K76 1375 aa18.1■□□□□ 0.49
PRDM16-206ENST00000511072 CCDC144AA2RUR9 1427 aa18.09■□□□□ 0.49
PRDM16-206ENST00000511072 RTF1Q92541 710 aaKnown RBP18.09■□□□□ 0.49
PRDM16-206ENST00000511072 PLCB2Q00722 1185 aa18.09■□□□□ 0.49
PRDM16-206ENST00000511072 ELL2O00472 640 aaPredicted RBP18.08■□□□□ 0.48
PRDM16-206ENST00000511072 SMC4Q9NTJ3 1288 aa18.08■□□□□ 0.48
PRDM16-206ENST00000511072 KCNJ4P48050 445 aa18.07■□□□□ 0.48
PRDM16-206ENST00000511072 GAPVD1Q14C86 1478 aa18.07■□□□□ 0.48
PRDM16-206ENST00000511072 KIF21BO75037 1637 aa18.07■□□□□ 0.48
PRDM16-206ENST00000511072 CHMP4BQ9H444 224 aaKnown RBP18.06■□□□□ 0.48
PRDM16-206ENST00000511072 AQRO60306 1485 aaKnown RBP eCLIP18.06■□□□□ 0.48
PRDM16-206ENST00000511072 CYB5RLQ6IPT4 315 aa18.06■□□□□ 0.48
PRDM16-206ENST00000511072 ARAP1Q96P48 1450 aa18.05■□□□□ 0.48
PRDM16-206ENST00000511072 FGD6Q6ZV73 1430 aa18.05■□□□□ 0.48
PRDM16-206ENST00000511072 PTMAP06454 111 aaKnown RBP18.05■□□□□ 0.48
PRDM16-206ENST00000511072 MYBBP1AQ9BQG0 1328 aaKnown RBP18.05■□□□□ 0.48
PRDM16-206ENST00000511072 IPO8O15397 1037 aaKnown RBP18.04■□□□□ 0.48
PRDM16-206ENST00000511072 EXOC6Q8TAG9 804 aa18.04■□□□□ 0.48
PRDM16-206ENST00000511072 TCERG1O14776 1098 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms