RNA–Protein interactions for RNA: ENST00000510238.7

CASC16-201, Transcript of cancer susceptibility 16, humanhuman

TSL 1 (best) BASIC

Gene CASC16, Length 955 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC16-201ENST00000510238 CD109Q6YHK3 1445 aa13.77□□□□□ -0.21
CASC16-201ENST00000510238 COL17A1Q9UMD9 1497 aaPredicted RBP13.76□□□□□ -0.21
CASC16-201ENST00000510238 KDM4FA0A1W2PPD8 638 aa13.75□□□□□ -0.21
CASC16-201ENST00000510238 FKBP8Q14318 412 aa13.75□□□□□ -0.21
CASC16-201ENST00000510238 ATP10BO94823 1461 aa13.74□□□□□ -0.21
CASC16-201ENST00000510238 P3H3Q8IVL6 736 aa13.74□□□□□ -0.21
CASC16-201ENST00000510238 KIF21BO75037 1637 aa13.74□□□□□ -0.21
CASC16-201ENST00000510238 RAPGEF6Q8TEU7 1601 aa13.73□□□□□ -0.21
CASC16-201ENST00000510238 KCNH8Q96L42 1107 aa13.73□□□□□ -0.21
CASC16-201ENST00000510238 EFCAB5A4FU69 1503 aa13.7□□□□□ -0.22
CASC16-201ENST00000510238 PHLDB1Q86UU1 1377 aa13.7□□□□□ -0.22
CASC16-201ENST00000510238 ABCA9Q8IUA7 1624 aa13.68□□□□□ -0.22
CASC16-201ENST00000510238 NUP153P49790 1475 aaKnown RBP13.67□□□□□ -0.22
CASC16-201ENST00000510238 FHOD3Q2V2M9 1422 aa13.67□□□□□ -0.22
CASC16-201ENST00000510238 REM2Q8IYK8 340 aaPredicted RBP13.67□□□□□ -0.22
CASC16-201ENST00000510238 ARAP3Q8WWN8 1544 aa13.67□□□□□ -0.22
CASC16-201ENST00000510238 ARID3CA6NKF2 412 aa13.66□□□□□ -0.22
CASC16-201ENST00000510238 ADGRL1O94910 1474 aa13.66□□□□□ -0.22
CASC16-201ENST00000510238 PROM2Q8N271 834 aa13.64□□□□□ -0.23
CASC16-201ENST00000510238 NEO1Q92859 1461 aa13.63□□□□□ -0.23
CASC16-201ENST00000510238 PLEKHD1A6NEE1 506 aa13.62□□□□□ -0.23
CASC16-201ENST00000510238 RANGAP1P46060 587 aaPredicted RBP13.62□□□□□ -0.23
CASC16-201ENST00000510238 UBTFP17480 764 aaKnown RBP13.59□□□□□ -0.23
CASC16-201ENST00000510238 FMN1Q68DA7 1419 aa13.58□□□□□ -0.24
CASC16-201ENST00000510238 ARHGAP35Q9NRY4 1499 aa13.55□□□□□ -0.24
CASC16-201ENST00000510238 CFAP74Q9C0B2 1584 aa13.54□□□□□ -0.24
CASC16-201ENST00000510238 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.54□□□□□ -0.24
CASC16-201ENST00000510238 HECW1Q76N89 1606 aa13.53□□□□□ -0.24
CASC16-201ENST00000510238 RAPGEF3O95398 923 aa13.52□□□□□ -0.25
CASC16-201ENST00000510238 FANCAO15360 1455 aa13.52□□□□□ -0.25
CASC16-201ENST00000510238 FRMPD1Q5SYB0 1578 aa13.51□□□□□ -0.25
CASC16-201ENST00000510238 CDK13Q14004 1512 aaKnown RBP13.51□□□□□ -0.25
CASC16-201ENST00000510238 DENND4BO75064 1496 aaPredicted RBP13.51□□□□□ -0.25
CASC16-201ENST00000510238 AKNAQ7Z591 1439 aa13.51□□□□□ -0.25
CASC16-201ENST00000510238 SPDYE1Q8NFV5 336 aaPredicted RBP13.51□□□□□ -0.25
CASC16-201ENST00000510238 CDK11AQ9UQ88 783 aaPredicted RBP13.51□□□□□ -0.25
CASC16-201ENST00000510238 PITPNM1O00562 1244 aa13.5□□□□□ -0.25
CASC16-201ENST00000510238 TTC37Q6PGP7 1564 aa13.49□□□□□ -0.25
CASC16-201ENST00000510238 PLCH2O75038 1416 aa13.48□□□□□ -0.25
CASC16-201ENST00000510238 RICTORQ6R327 1708 aa13.48□□□□□ -0.25
CASC16-201ENST00000510238 ADAMTSL3P82987 1691 aa13.47□□□□□ -0.25
CASC16-201ENST00000510238 ZMYM4Q5VZL5 1548 aa13.46□□□□□ -0.25
CASC16-201ENST00000510238 ARHGEF40Q8TER5 1519 aa13.46□□□□□ -0.25
CASC16-201ENST00000510238 MAGI2Q86UL8 1455 aa13.46□□□□□ -0.25
CASC16-201ENST00000510238 HECW2Q9P2P5 1572 aa13.45□□□□□ -0.26
CASC16-201ENST00000510238 ATP1B4Q9UN42 357 aaPredicted RBP13.45□□□□□ -0.26
CASC16-201ENST00000510238 TROQ12816 1431 aaPredicted RBP13.45□□□□□ -0.26
CASC16-201ENST00000510238 CLIP1P30622 1438 aa13.44□□□□□ -0.26
CASC16-201ENST00000510238 BCORL1Q5H9F3 1711 aa13.44□□□□□ -0.26
CASC16-201ENST00000510238 KIF14Q15058 1648 aa13.43□□□□□ -0.26
CASC16-201ENST00000510238 EFCAB2Q5VUJ9 269 aa13.43□□□□□ -0.26
CASC16-201ENST00000510238 MYO5CQ9NQX4 1742 aa13.43□□□□□ -0.26
CASC16-201ENST00000510238 CLEC11AQ9Y240 323 aa13.43□□□□□ -0.26
CASC16-201ENST00000510238 PTPRMP28827 1452 aa13.42□□□□□ -0.26
CASC16-201ENST00000510238 CCDC18Q5T9S5 1454 aa13.42□□□□□ -0.26
CASC16-201ENST00000510238 CASKIN1Q8WXD9 1431 aa13.42□□□□□ -0.26
CASC16-201ENST00000510238 CHRDL2Q6WN34 429 aa13.42□□□□□ -0.26
CASC16-201ENST00000510238 STAG3Q9UJ98 1225 aa13.42□□□□□ -0.26
CASC16-201ENST00000510238 ARID4BQ4LE39 1312 aaPredicted RBP13.41□□□□□ -0.26
CASC16-201ENST00000510238 POGZQ7Z3K3 1410 aa13.41□□□□□ -0.26
CASC16-201ENST00000510238 SCAPERQ9BY12 1400 aa13.41□□□□□ -0.26
CASC16-201ENST00000510238 ZFYVE16Q7Z3T8 1539 aa13.41□□□□□ -0.26
CASC16-201ENST00000510238 LRRIQ1Q96JM4 1722 aa13.39□□□□□ -0.27
CASC16-201ENST00000510238 MADDQ8WXG6 1647 aa13.38□□□□□ -0.27
CASC16-201ENST00000510238 PCF11O94913 1555 aaKnown RBP13.37□□□□□ -0.27
CASC16-201ENST00000510238 FYCO1Q9BQS8 1478 aa13.37□□□□□ -0.27
CASC16-201ENST00000510238 YEATS2Q9ULM3 1422 aa13.37□□□□□ -0.27
CASC16-201ENST00000510238 ZNF518AQ6AHZ1 1483 aa13.36□□□□□ -0.27
CASC16-201ENST00000510238 ARHGAP5Q13017 1502 aa13.36□□□□□ -0.27
CASC16-201ENST00000510238 ATP10AO60312 1499 aa13.35□□□□□ -0.27
CASC16-201ENST00000510238 KDM5CP41229 1560 aa13.34□□□□□ -0.27
CASC16-201ENST00000510238 C9orf84Q5VXU9 1444 aa13.33□□□□□ -0.28
CASC16-201ENST00000510238 PREX2Q70Z35 1606 aa13.33□□□□□ -0.28
CASC16-201ENST00000510238 CDC42BPBQ9Y5S2 1711 aa13.33□□□□□ -0.28
CASC16-201ENST00000510238 RIMS1Q86UR5 1692 aaKnown RBP13.32□□□□□ -0.28
CASC16-201ENST00000510238 PRR29P0C7W0 189 aa13.32□□□□□ -0.28
CASC16-201ENST00000510238 SIGLEC1Q9BZZ2 1709 aa13.31□□□□□ -0.28
CASC16-201ENST00000510238 MLH3Q9UHC1 1453 aa13.3□□□□□ -0.28
CASC16-201ENST00000510238 ABCC1P33527 1531 aa13.29□□□□□ -0.28
CASC16-201ENST00000510238 REREQ9P2R6 1566 aa13.29□□□□□ -0.28
CASC16-201ENST00000510238 FXR2P51116 673 aaKnown RBP eCLIP13.29□□□□□ -0.28
CASC16-201ENST00000510238 AFAP1Q8N556 730 aa13.29□□□□□ -0.28
CASC16-201ENST00000510238 FBXO3Q9UK99 471 aa13.29□□□□□ -0.28
CASC16-201ENST00000510238 LMTK3Q96Q04 1460 aa13.29□□□□□ -0.28
CASC16-201ENST00000510238 ARHGEF12Q9NZN5 1544 aa13.29□□□□□ -0.28
CASC16-201ENST00000510238 FER1L4A9Z1Z3 1794 aa13.28□□□□□ -0.28
CASC16-201ENST00000510238 CDC42BPAQ5VT25 1732 aa13.27□□□□□ -0.28
CASC16-201ENST00000510238 ILDR1Q86SU0 546 aaPredicted RBP13.26□□□□□ -0.29
CASC16-201ENST00000510238 ITSN2Q9NZM3 1697 aa13.26□□□□□ -0.29
CASC16-201ENST00000510238 DIP2CQ9Y2E4 1556 aa13.26□□□□□ -0.29
CASC16-201ENST00000510238 TRAPPC8Q9Y2L5 1435 aa13.25□□□□□ -0.29
CASC16-201ENST00000510238 MLECQ14165 292 aa13.25□□□□□ -0.29
CASC16-201ENST00000510238 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
CASC16-201ENST00000510238 AGLP35573 1532 aa13.24□□□□□ -0.29
CASC16-201ENST00000510238 GPATCH8Q9UKJ3 1502 aaKnown RBP13.24□□□□□ -0.29
CASC16-201ENST00000510238 MYT1LQ9UL68 1186 aa13.24□□□□□ -0.29
CASC16-201ENST00000510238 ABCA6Q8N139 1617 aa13.23□□□□□ -0.29
CASC16-201ENST00000510238 PLEKHH2Q8IVE3 1493 aa13.23□□□□□ -0.29
CASC16-201ENST00000510238 KIAA1107Q9UPP5 1409 aa13.22□□□□□ -0.29
CASC16-201ENST00000510238 MTUS2Q5JR59 1369 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms