RNA–Protein interactions for RNA: ENST00000510181.5

COPB2-206, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 1,037 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-206ENST00000510181 CDK13Q14004 1512 aaKnown RBP12.22□□□□□ -0.45
COPB2-206ENST00000510181 CCDC18Q5T9S5 1454 aa12.22□□□□□ -0.45
COPB2-206ENST00000510181 RBM42Q9BTD8 480 aaKnown RBP12.22□□□□□ -0.45
COPB2-206ENST00000510181 ASXL2Q76L83 1435 aa12.21□□□□□ -0.45
COPB2-206ENST00000510181 WDR7Q9Y4E6 1490 aa12.19□□□□□ -0.46
COPB2-206ENST00000510181 PLEKHD1A6NEE1 506 aa12.17□□□□□ -0.46
COPB2-206ENST00000510181 CDK11AQ9UQ88 783 aaPredicted RBP12.17□□□□□ -0.46
COPB2-206ENST00000510181 CFAP43Q8NDM7 1665 aa12.16□□□□□ -0.46
COPB2-206ENST00000510181 ABCC10Q5T3U5 1492 aa12.15□□□□□ -0.46
COPB2-206ENST00000510181 DIP2BQ9P265 1576 aa12.15□□□□□ -0.46
COPB2-206ENST00000510181 MAP3K1Q13233 1512 aa12.15□□□□□ -0.46
COPB2-206ENST00000510181 TIAM1Q13009 1591 aa12.14□□□□□ -0.47
COPB2-206ENST00000510181 TROQ12816 1431 aaPredicted RBP12.14□□□□□ -0.47
COPB2-206ENST00000510181 KIF13AQ9H1H9 1805 aa12.14□□□□□ -0.47
COPB2-206ENST00000510181 SPDYE2BA6NHP3 402 aa12.13□□□□□ -0.47
COPB2-206ENST00000510181 SPDYE6P0CI01 402 aa12.13□□□□□ -0.47
COPB2-206ENST00000510181 SPDYE2Q495Y8 402 aa12.13□□□□□ -0.47
COPB2-206ENST00000510181 KCNH8Q96L42 1107 aa12.13□□□□□ -0.47
COPB2-206ENST00000510181 GLI2P10070 1586 aa12.13□□□□□ -0.47
COPB2-206ENST00000510181 MAGI3Q5TCQ9 1506 aa12.12□□□□□ -0.47
COPB2-206ENST00000510181 FAM69CQ0P6D2 419 aa12.12□□□□□ -0.47
COPB2-206ENST00000510181 MTUS2Q5JR59 1369 aa12.11□□□□□ -0.47
COPB2-206ENST00000510181 EHBP1L1Q8N3D4 1523 aa12.11□□□□□ -0.47
COPB2-206ENST00000510181 KIF14Q15058 1648 aa12.1□□□□□ -0.47
COPB2-206ENST00000510181 ABCA9Q8IUA7 1624 aa12.09□□□□□ -0.47
COPB2-206ENST00000510181 LRRC9Q6ZRR7 1453 aa12.08□□□□□ -0.47
COPB2-206ENST00000510181 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.08□□□□□ -0.48
COPB2-206ENST00000510181 MAP3K4Q9Y6R4 1608 aa12.08□□□□□ -0.48
COPB2-206ENST00000510181 TSPOAP1O95153 1857 aa12.06□□□□□ -0.48
COPB2-206ENST00000510181 TTC37Q6PGP7 1564 aa12.06□□□□□ -0.48
COPB2-206ENST00000510181 SPDYE4A6NLX3 237 aa12.06□□□□□ -0.48
COPB2-206ENST00000510181 KANK4Q5T7N3 995 aaPredicted RBP12.06□□□□□ -0.48
COPB2-206ENST00000510181 ZNF692Q9BU19 519 aaPredicted RBP12.06□□□□□ -0.48
COPB2-206ENST00000510181 SUPT6HQ7KZ85 1726 aaKnown RBP12.06□□□□□ -0.48
COPB2-206ENST00000510181 CD109Q6YHK3 1445 aa12.05□□□□□ -0.48
COPB2-206ENST00000510181 MYO5CQ9NQX4 1742 aa12.03□□□□□ -0.48
COPB2-206ENST00000510181 PPRC1Q5VV67 1664 aaKnown RBP12.03□□□□□ -0.48
COPB2-206ENST00000510181 FKBP8Q14318 412 aa12.02□□□□□ -0.49
COPB2-206ENST00000510181 NCOA2Q15596 1464 aa12.02□□□□□ -0.49
COPB2-206ENST00000510181 TEX14Q8IWB6 1497 aa12.02□□□□□ -0.49
COPB2-206ENST00000510181 CDC42BPAQ5VT25 1732 aa12.01□□□□□ -0.49
COPB2-206ENST00000510181 CCNB3Q8WWL7 1395 aa12.01□□□□□ -0.49
COPB2-206ENST00000510181 PLCH2O75038 1416 aa12.01□□□□□ -0.49
COPB2-206ENST00000510181 ARAP3Q8WWN8 1544 aa12□□□□□ -0.49
COPB2-206ENST00000510181 PREX2Q70Z35 1606 aa12□□□□□ -0.49
COPB2-206ENST00000510181 AKT1S1Q96B36 256 aa11.99□□□□□ -0.49
COPB2-206ENST00000510181 GPATCH8Q9UKJ3 1502 aaKnown RBP11.99□□□□□ -0.49
COPB2-206ENST00000510181 ITSN2Q9NZM3 1697 aa11.99□□□□□ -0.49
COPB2-206ENST00000510181 CDC42BPBQ9Y5S2 1711 aa11.99□□□□□ -0.49
COPB2-206ENST00000510181 CFAP74Q9C0B2 1584 aa11.98□□□□□ -0.49
COPB2-206ENST00000510181 ARHGAP5Q13017 1502 aa11.98□□□□□ -0.49
COPB2-206ENST00000510181 SSUH2Q9Y2M2 353 aa11.98□□□□□ -0.49
COPB2-206ENST00000510181 FANCAO15360 1455 aa11.97□□□□□ -0.49
COPB2-206ENST00000510181 NEO1Q92859 1461 aa11.96□□□□□ -0.49
COPB2-206ENST00000510181 PPARGC1BQ86YN6 1023 aaKnown RBP11.96□□□□□ -0.49
COPB2-206ENST00000510181 PHLDB1Q86UU1 1377 aa11.95□□□□□ -0.5
COPB2-206ENST00000510181 EFCAB2Q5VUJ9 269 aa11.95□□□□□ -0.5
COPB2-206ENST00000510181 MYOM3Q5VTT5 1437 aa11.94□□□□□ -0.5
COPB2-206ENST00000510181 CFDP1Q9UEE9 299 aaPredicted RBP11.94□□□□□ -0.5
COPB2-206ENST00000510181 AKNAQ7Z591 1439 aa11.94□□□□□ -0.5
COPB2-206ENST00000510181 MIA2Q96PC5 1412 aa11.92□□□□□ -0.5
COPB2-206ENST00000510181 SAMD9LQ8IVG5 1584 aa11.92□□□□□ -0.5
COPB2-206ENST00000510181 ADGRL1O94910 1474 aa11.91□□□□□ -0.5
COPB2-206ENST00000510181 ZNF777Q9ULD5 760 aaPredicted RBP11.91□□□□□ -0.5
COPB2-206ENST00000510181 ABCC1P33527 1531 aa11.91□□□□□ -0.5
COPB2-206ENST00000510181 PLEKHH2Q8IVE3 1493 aa11.9□□□□□ -0.5
COPB2-206ENST00000510181 KDM6BO15054 1643 aa11.9□□□□□ -0.5
COPB2-206ENST00000510181 FGD6Q6ZV73 1430 aa11.9□□□□□ -0.5
COPB2-206ENST00000510181 CAMSAP2Q08AD1 1489 aa11.89□□□□□ -0.51
COPB2-206ENST00000510181 SCAPERQ9BY12 1400 aa11.89□□□□□ -0.51
COPB2-206ENST00000510181 PTPN23Q9H3S7 1636 aa11.89□□□□□ -0.51
COPB2-206ENST00000510181 DENND4BO75064 1496 aaPredicted RBP11.89□□□□□ -0.51
COPB2-206ENST00000510181 KIAA1107Q9UPP5 1409 aa11.88□□□□□ -0.51
COPB2-206ENST00000510181 COL17A1Q9UMD9 1497 aaPredicted RBP11.88□□□□□ -0.51
COPB2-206ENST00000510181 ZNF644Q9H582 1327 aaPredicted RBP11.87□□□□□ -0.51
COPB2-206ENST00000510181 SYCP2Q9BX26 1530 aa11.87□□□□□ -0.51
COPB2-206ENST00000510181 TCOF1Q13428 1488 aaKnown RBP11.87□□□□□ -0.51
COPB2-206ENST00000510181 POGZQ7Z3K3 1410 aa11.86□□□□□ -0.51
COPB2-206ENST00000510181 ARHGEF12Q9NZN5 1544 aa11.86□□□□□ -0.51
COPB2-206ENST00000510181 RICTORQ6R327 1708 aa11.86□□□□□ -0.51
COPB2-206ENST00000510181 FRMPD1Q5SYB0 1578 aa11.85□□□□□ -0.51
COPB2-206ENST00000510181 ZNF518AQ6AHZ1 1483 aa11.84□□□□□ -0.51
COPB2-206ENST00000510181 MBD5Q9P267 1494 aa11.84□□□□□ -0.51
COPB2-206ENST00000510181 RAPGEF3O95398 923 aa11.84□□□□□ -0.51
COPB2-206ENST00000510181 HNRNPMP52272 730 aaKnown RBP eCLIP11.84□□□□□ -0.51
COPB2-206ENST00000510181 TRAPPC8Q9Y2L5 1435 aa11.84□□□□□ -0.51
COPB2-206ENST00000510181 ARHGEF5Q12774 1597 aa11.84□□□□□ -0.51
COPB2-206ENST00000510181 RSPH4AQ5TD94 716 aa11.83□□□□□ -0.52
COPB2-206ENST00000510181 RRBP1Q9P2E9 1410 aaKnown RBP11.83□□□□□ -0.52
COPB2-206ENST00000510181 KDM5CP41229 1560 aa11.83□□□□□ -0.52
COPB2-206ENST00000510181 CCDC141Q6ZP82 1450 aa11.83□□□□□ -0.52
COPB2-206ENST00000510181 ZMYM4Q5VZL5 1548 aa11.82□□□□□ -0.52
COPB2-206ENST00000510181 FAM50AQ14320 339 aaKnown RBP11.82□□□□□ -0.52
COPB2-206ENST00000510181 REM2Q8IYK8 340 aaPredicted RBP11.82□□□□□ -0.52
COPB2-206ENST00000510181 AFAP1Q8N556 730 aa11.82□□□□□ -0.52
COPB2-206ENST00000510181 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.81□□□□□ -0.52
COPB2-206ENST00000510181 PROM2Q8N271 834 aa11.81□□□□□ -0.52
COPB2-206ENST00000510181 DNMT1P26358 1616 aaKnown RBP11.8□□□□□ -0.52
COPB2-206ENST00000510181 SPDYE1Q8NFV5 336 aaPredicted RBP11.8□□□□□ -0.52
COPB2-206ENST00000510181 HECW2Q9P2P5 1572 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms