RNA–Protein interactions for RNA: ENST00000509977.1

RETREG1-205, Transcript of reticulophagy regulator 1, humanhuman

TSL 5

Gene RETREG1, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-205ENST00000509977 MAGI3Q5TCQ9 1506 aa11.98□□□□□ -0.49
RETREG1-205ENST00000509977 TEX14Q8IWB6 1497 aa11.98□□□□□ -0.49
RETREG1-205ENST00000509977 REM2Q8IYK8 340 aaPredicted RBP11.98□□□□□ -0.49
RETREG1-205ENST00000509977 COL17A1Q9UMD9 1497 aaPredicted RBP11.97□□□□□ -0.49
RETREG1-205ENST00000509977 NUP153P49790 1475 aaKnown RBP11.96□□□□□ -0.49
RETREG1-205ENST00000509977 ABCA9Q8IUA7 1624 aa11.95□□□□□ -0.5
RETREG1-205ENST00000509977 SSUH2Q9Y2M2 353 aa11.94□□□□□ -0.5
RETREG1-205ENST00000509977 FHOD3Q2V2M9 1422 aa11.94□□□□□ -0.5
RETREG1-205ENST00000509977 CD109Q6YHK3 1445 aa11.92□□□□□ -0.5
RETREG1-205ENST00000509977 CHRDL2Q6WN34 429 aa11.91□□□□□ -0.5
RETREG1-205ENST00000509977 P3H3Q8IVL6 736 aa11.91□□□□□ -0.5
RETREG1-205ENST00000509977 FAM9AQ8IZU1 332 aaPredicted RBP11.9□□□□□ -0.5
RETREG1-205ENST00000509977 ARAP3Q8WWN8 1544 aa11.89□□□□□ -0.51
RETREG1-205ENST00000509977 ARHGAP35Q9NRY4 1499 aa11.88□□□□□ -0.51
RETREG1-205ENST00000509977 PITPNM1O00562 1244 aa11.85□□□□□ -0.51
RETREG1-205ENST00000509977 NEO1Q92859 1461 aa11.84□□□□□ -0.51
RETREG1-205ENST00000509977 PHLDB1Q86UU1 1377 aa11.84□□□□□ -0.51
RETREG1-205ENST00000509977 KDM4FA0A1W2PPD8 638 aa11.84□□□□□ -0.51
RETREG1-205ENST00000509977 KCNH8Q96L42 1107 aa11.84□□□□□ -0.51
RETREG1-205ENST00000509977 FMN1Q68DA7 1419 aa11.84□□□□□ -0.51
RETREG1-205ENST00000509977 LRRIQ1Q96JM4 1722 aa11.83□□□□□ -0.52
RETREG1-205ENST00000509977 HECW1Q76N89 1606 aa11.82□□□□□ -0.52
RETREG1-205ENST00000509977 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.82□□□□□ -0.52
RETREG1-205ENST00000509977 FRMPD1Q5SYB0 1578 aa11.82□□□□□ -0.52
RETREG1-205ENST00000509977 CDK13Q14004 1512 aaKnown RBP11.81□□□□□ -0.52
RETREG1-205ENST00000509977 TTC37Q6PGP7 1564 aa11.81□□□□□ -0.52
RETREG1-205ENST00000509977 ARID3CA6NKF2 412 aa11.81□□□□□ -0.52
RETREG1-205ENST00000509977 SPDYE4A6NLX3 237 aa11.81□□□□□ -0.52
RETREG1-205ENST00000509977 ADGRL1O94910 1474 aa11.8□□□□□ -0.52
RETREG1-205ENST00000509977 UBTFP17480 764 aaKnown RBP11.79□□□□□ -0.52
RETREG1-205ENST00000509977 RANGAP1P46060 587 aaPredicted RBP11.79□□□□□ -0.52
RETREG1-205ENST00000509977 CFAP74Q9C0B2 1584 aa11.79□□□□□ -0.52
RETREG1-205ENST00000509977 RICTORQ6R327 1708 aa11.78□□□□□ -0.52
RETREG1-205ENST00000509977 SPDYE1Q8NFV5 336 aaPredicted RBP11.78□□□□□ -0.52
RETREG1-205ENST00000509977 CLEC11AQ9Y240 323 aa11.77□□□□□ -0.53
RETREG1-205ENST00000509977 PLEKHD1A6NEE1 506 aa11.76□□□□□ -0.53
RETREG1-205ENST00000509977 SP7Q8TDD2 431 aaPredicted RBP11.76□□□□□ -0.53
RETREG1-205ENST00000509977 PCF11O94913 1555 aaKnown RBP11.75□□□□□ -0.53
RETREG1-205ENST00000509977 CASKIN1Q8WXD9 1431 aa11.75□□□□□ -0.53
RETREG1-205ENST00000509977 FANCAO15360 1455 aa11.75□□□□□ -0.53
RETREG1-205ENST00000509977 ZMYM4Q5VZL5 1548 aa11.75□□□□□ -0.53
RETREG1-205ENST00000509977 KIF14Q15058 1648 aa11.74□□□□□ -0.53
RETREG1-205ENST00000509977 MYO5CQ9NQX4 1742 aa11.74□□□□□ -0.53
RETREG1-205ENST00000509977 PLCH2O75038 1416 aa11.73□□□□□ -0.53
RETREG1-205ENST00000509977 TROQ12816 1431 aaPredicted RBP11.73□□□□□ -0.53
RETREG1-205ENST00000509977 AKNAQ7Z591 1439 aa11.73□□□□□ -0.53
RETREG1-205ENST00000509977 ARHGEF40Q8TER5 1519 aa11.73□□□□□ -0.53
RETREG1-205ENST00000509977 CCDC18Q5T9S5 1454 aa11.72□□□□□ -0.53
RETREG1-205ENST00000509977 FYCO1Q9BQS8 1478 aa11.72□□□□□ -0.53
RETREG1-205ENST00000509977 ADAMTSL3P82987 1691 aa11.71□□□□□ -0.53
RETREG1-205ENST00000509977 DENND4BO75064 1496 aaPredicted RBP11.71□□□□□ -0.53
RETREG1-205ENST00000509977 PIP4P2Q8N4L2 257 aa11.7□□□□□ -0.54
RETREG1-205ENST00000509977 RAPGEF3O95398 923 aa11.69□□□□□ -0.54
RETREG1-205ENST00000509977 BCORL1Q5H9F3 1711 aa11.69□□□□□ -0.54
RETREG1-205ENST00000509977 CDC42BPBQ9Y5S2 1711 aa11.69□□□□□ -0.54
RETREG1-205ENST00000509977 CLIP1P30622 1438 aa11.69□□□□□ -0.54
RETREG1-205ENST00000509977 SIGLEC1Q9BZZ2 1709 aa11.68□□□□□ -0.54
RETREG1-205ENST00000509977 MAGI2Q86UL8 1455 aa11.68□□□□□ -0.54
RETREG1-205ENST00000509977 POGZQ7Z3K3 1410 aa11.68□□□□□ -0.54
RETREG1-205ENST00000509977 PREX2Q70Z35 1606 aa11.68□□□□□ -0.54
RETREG1-205ENST00000509977 FXR2P51116 673 aaKnown RBP eCLIP11.67□□□□□ -0.54
RETREG1-205ENST00000509977 CDK11AQ9UQ88 783 aaPredicted RBP11.66□□□□□ -0.54
RETREG1-205ENST00000509977 KDM5CP41229 1560 aa11.66□□□□□ -0.54
RETREG1-205ENST00000509977 CDC42BPAQ5VT25 1732 aa11.65□□□□□ -0.54
RETREG1-205ENST00000509977 ZFYVE16Q7Z3T8 1539 aa11.65□□□□□ -0.55
RETREG1-205ENST00000509977 SCAPERQ9BY12 1400 aa11.63□□□□□ -0.55
RETREG1-205ENST00000509977 YEATS2Q9ULM3 1422 aa11.62□□□□□ -0.55
RETREG1-205ENST00000509977 ABCC1P33527 1531 aa11.62□□□□□ -0.55
RETREG1-205ENST00000509977 ARHGAP5Q13017 1502 aa11.62□□□□□ -0.55
RETREG1-205ENST00000509977 MADDQ8WXG6 1647 aa11.62□□□□□ -0.55
RETREG1-205ENST00000509977 ZNF518AQ6AHZ1 1483 aa11.62□□□□□ -0.55
RETREG1-205ENST00000509977 HECW2Q9P2P5 1572 aa11.62□□□□□ -0.55
RETREG1-205ENST00000509977 ITSN2Q9NZM3 1697 aa11.62□□□□□ -0.55
RETREG1-205ENST00000509977 PRR29P0C7W0 189 aa11.61□□□□□ -0.55
RETREG1-205ENST00000509977 EFCAB2Q5VUJ9 269 aa11.61□□□□□ -0.55
RETREG1-205ENST00000509977 PTPRMP28827 1452 aa11.61□□□□□ -0.55
RETREG1-205ENST00000509977 REREQ9P2R6 1566 aa11.61□□□□□ -0.55
RETREG1-205ENST00000509977 CEP162Q5TB80 1403 aa11.6□□□□□ -0.55
RETREG1-205ENST00000509977 ATP1B4Q9UN42 357 aaPredicted RBP11.6□□□□□ -0.55
RETREG1-205ENST00000509977 ARHGEF12Q9NZN5 1544 aa11.6□□□□□ -0.55
RETREG1-205ENST00000509977 MLH3Q9UHC1 1453 aa11.58□□□□□ -0.56
RETREG1-205ENST00000509977 SAMD9LQ8IVG5 1584 aa11.58□□□□□ -0.56
RETREG1-205ENST00000509977 DIP2CQ9Y2E4 1556 aa11.58□□□□□ -0.56
RETREG1-205ENST00000509977 ATP10AO60312 1499 aa11.57□□□□□ -0.56
RETREG1-205ENST00000509977 GPATCH8Q9UKJ3 1502 aaKnown RBP11.57□□□□□ -0.56
RETREG1-205ENST00000509977 FKBP8Q14318 412 aa11.57□□□□□ -0.56
RETREG1-205ENST00000509977 C9orf84Q5VXU9 1444 aa11.57□□□□□ -0.56
RETREG1-205ENST00000509977 ABCA6Q8N139 1617 aa11.57□□□□□ -0.56
RETREG1-205ENST00000509977 RIMS1Q86UR5 1692 aaKnown RBP11.56□□□□□ -0.56
RETREG1-205ENST00000509977 PRKAR2AP13861 404 aaKnown RBP11.56□□□□□ -0.56
RETREG1-205ENST00000509977 STAG3Q9UJ98 1225 aa11.56□□□□□ -0.56
RETREG1-205ENST00000509977 KIDINS220Q9ULH0 1771 aa11.56□□□□□ -0.56
RETREG1-205ENST00000509977 EHBP1L1Q8N3D4 1523 aa11.55□□□□□ -0.56
RETREG1-205ENST00000509977 PROM2Q8N271 834 aa11.55□□□□□ -0.56
RETREG1-205ENST00000509977 TIAM1Q13009 1591 aa11.54□□□□□ -0.56
RETREG1-205ENST00000509977 FER1L4A9Z1Z3 1794 aa11.54□□□□□ -0.56
RETREG1-205ENST00000509977 TRAPPC8Q9Y2L5 1435 aa11.54□□□□□ -0.56
RETREG1-205ENST00000509977 AGLP35573 1532 aa11.54□□□□□ -0.56
RETREG1-205ENST00000509977 KIAA1107Q9UPP5 1409 aa11.53□□□□□ -0.56
RETREG1-205ENST00000509977 SYCP2Q9BX26 1530 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms