RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 PLPPR3Q6T4P5 718 aa24.36■■□□□ 1.49
SMAD5-206ENST00000509962 YEATS2Q9ULM3 1422 aa24.35■■□□□ 1.49
SMAD5-206ENST00000509962 MLECQ14165 292 aa24.35■■□□□ 1.49
SMAD5-206ENST00000509962 RIMS1Q86UR5 1692 aaKnown RBP24.34■■□□□ 1.49
SMAD5-206ENST00000509962 MYO5CQ9NQX4 1742 aa24.3■■□□□ 1.48
SMAD5-206ENST00000509962 PCF11O94913 1555 aaKnown RBP24.29■■□□□ 1.48
SMAD5-206ENST00000509962 CLIP1P30622 1438 aa24.28■■□□□ 1.48
SMAD5-206ENST00000509962 TROQ12816 1431 aaPredicted RBP24.28■■□□□ 1.48
SMAD5-206ENST00000509962 MYT1LQ9UL68 1186 aa24.27■■□□□ 1.48
SMAD5-206ENST00000509962 ATP10AO60312 1499 aa24.26■■□□□ 1.47
SMAD5-206ENST00000509962 LMTK3Q96Q04 1460 aa24.26■■□□□ 1.47
SMAD5-206ENST00000509962 KIF14Q15058 1648 aa24.26■■□□□ 1.47
SMAD5-206ENST00000509962 FBXO41Q8TF61 875 aa24.26■■□□□ 1.47
SMAD5-206ENST00000509962 SIGLEC1Q9BZZ2 1709 aa24.24■■□□□ 1.47
SMAD5-206ENST00000509962 AFAP1Q8N556 730 aa24.24■■□□□ 1.47
SMAD5-206ENST00000509962 HSPA2P54652 639 aa24.23■■□□□ 1.47
SMAD5-206ENST00000509962 ARHGAP5Q13017 1502 aa24.23■■□□□ 1.47
SMAD5-206ENST00000509962 ZNF518AQ6AHZ1 1483 aa24.2■■□□□ 1.47
SMAD5-206ENST00000509962 C9orf84Q5VXU9 1444 aa24.2■■□□□ 1.46
SMAD5-206ENST00000509962 LRRIQ1Q96JM4 1722 aa24.18■■□□□ 1.46
SMAD5-206ENST00000509962 FER1L4A9Z1Z3 1794 aa24.18■■□□□ 1.46
SMAD5-206ENST00000509962 CASKIN1Q8WXD9 1431 aa24.17■■□□□ 1.46
SMAD5-206ENST00000509962 CCDC18Q5T9S5 1454 aa24.15■■□□□ 1.46
SMAD5-206ENST00000509962 CEBPAP49715 358 aaPredicted RBP24.13■■□□□ 1.45
SMAD5-206ENST00000509962 ARHGEF12Q9NZN5 1544 aa24.13■■□□□ 1.45
SMAD5-206ENST00000509962 CDC42BPBQ9Y5S2 1711 aa24.13■■□□□ 1.45
SMAD5-206ENST00000509962 KDM5CP41229 1560 aa24.11■■□□□ 1.45
SMAD5-206ENST00000509962 ESF1Q9H501 851 aaKnown RBP24.07■■□□□ 1.44
SMAD5-206ENST00000509962 MLH3Q9UHC1 1453 aa24.07■■□□□ 1.44
SMAD5-206ENST00000509962 ZNF777Q9ULD5 760 aaPredicted RBP24.06■■□□□ 1.44
SMAD5-206ENST00000509962 PREX2Q70Z35 1606 aa24.06■■□□□ 1.44
SMAD5-206ENST00000509962 TRAPPC8Q9Y2L5 1435 aa24.05■■□□□ 1.44
SMAD5-206ENST00000509962 FYCO1Q9BQS8 1478 aa24.04■■□□□ 1.44
SMAD5-206ENST00000509962 DIP2CQ9Y2E4 1556 aa24.03■■□□□ 1.44
SMAD5-206ENST00000509962 ABCC1P33527 1531 aa24.01■■□□□ 1.43
SMAD5-206ENST00000509962 PREX1Q8TCU6 1659 aa24.01■■□□□ 1.43
SMAD5-206ENST00000509962 REREQ9P2R6 1566 aa24■■□□□ 1.43
SMAD5-206ENST00000509962 CDC42BPAQ5VT25 1732 aa23.99■■□□□ 1.43
SMAD5-206ENST00000509962 CERKQ8TCT0 537 aa23.99■■□□□ 1.43
SMAD5-206ENST00000509962 DMRT2Q9Y5R5 561 aa23.99■■□□□ 1.43
SMAD5-206ENST00000509962 SETD1BQ9UPS6 1966 aaKnown RBP23.99■■□□□ 1.43
SMAD5-206ENST00000509962 ABCA6Q8N139 1617 aa23.99■■□□□ 1.43
SMAD5-206ENST00000509962 ITSN2Q9NZM3 1697 aa23.99■■□□□ 1.43
SMAD5-206ENST00000509962 HNRNPMP52272 730 aaKnown RBP eCLIP23.97■■□□□ 1.433e-6■■■■■ 28.4
SMAD5-206ENST00000509962 AGLP35573 1532 aa23.96■■□□□ 1.43
SMAD5-206ENST00000509962 UHRF1BP1Q6BDS2 1440 aa23.96■■□□□ 1.43
SMAD5-206ENST00000509962 CFDP1Q9UEE9 299 aaPredicted RBP23.95■■□□□ 1.42
SMAD5-206ENST00000509962 SPAG9O60271 1321 aaKnown RBP23.94■■□□□ 1.42
SMAD5-206ENST00000509962 GPATCH8Q9UKJ3 1502 aaKnown RBP23.94■■□□□ 1.42
SMAD5-206ENST00000509962 KIDINS220Q9ULH0 1771 aa23.93■■□□□ 1.42
SMAD5-206ENST00000509962 CCNB3Q8WWL7 1395 aa23.91■■□□□ 1.42
SMAD5-206ENST00000509962 SAMD9LQ8IVG5 1584 aa23.9■■□□□ 1.42
SMAD5-206ENST00000509962 C3P01024 1663 aa23.89■■□□□ 1.42
SMAD5-206ENST00000509962 MTUS2Q5JR59 1369 aa23.89■■□□□ 1.41
SMAD5-206ENST00000509962 CNTLNQ9NXG0 1405 aa23.88■■□□□ 1.41
SMAD5-206ENST00000509962 SYCP2Q9BX26 1530 aa23.87■■□□□ 1.41
SMAD5-206ENST00000509962 KIAA1107Q9UPP5 1409 aa23.86■■□□□ 1.41
SMAD5-206ENST00000509962 PLEKHH2Q8IVE3 1493 aa23.86■■□□□ 1.41
SMAD5-206ENST00000509962 STRCQ7RTU9 1775 aa23.86■■□□□ 1.41
SMAD5-206ENST00000509962 ZMYM3Q14202 1370 aa23.81■■□□□ 1.4
SMAD5-206ENST00000509962 SUPT6HQ7KZ85 1726 aaKnown RBP23.81■■□□□ 1.4
SMAD5-206ENST00000509962 ATP7AQ04656 1500 aa23.79■■□□□ 1.4
SMAD5-206ENST00000509962 GGT6Q6P531 493 aa23.79■■□□□ 1.4
SMAD5-206ENST00000509962 ZNF644Q9H582 1327 aaPredicted RBP23.78■■□□□ 1.4
SMAD5-206ENST00000509962 PTPRTO14522 1441 aa23.77■■□□□ 1.4
SMAD5-206ENST00000509962 A2MP01023 1474 aa23.77■■□□□ 1.4
SMAD5-206ENST00000509962 NPATQ14207 1427 aa23.76■■□□□ 1.39
SMAD5-206ENST00000509962 MROH2AA6NES4 1674 aa23.74■■□□□ 1.39
SMAD5-206ENST00000509962 PPP6R1Q9UPN7 881 aa23.73■■□□□ 1.39
SMAD5-206ENST00000509962 INO80Q9ULG1 1556 aaPredicted RBP23.73■■□□□ 1.39
SMAD5-206ENST00000509962 EHBP1L1Q8N3D4 1523 aa23.71■■□□□ 1.39
SMAD5-206ENST00000509962 CEP162Q5TB80 1403 aa23.71■■□□□ 1.39
SMAD5-206ENST00000509962 CLTCQ00610 1675 aaKnown RBP23.7■■□□□ 1.38
SMAD5-206ENST00000509962 TIAM1Q13009 1591 aa23.69■■□□□ 1.38
SMAD5-206ENST00000509962 NCOA1Q15788 1441 aa23.69■■□□□ 1.38
SMAD5-206ENST00000509962 PLXNC1O60486 1568 aa23.69■■□□□ 1.38
SMAD5-206ENST00000509962 MBD5Q9P267 1494 aa23.68■■□□□ 1.38
SMAD5-206ENST00000509962 ADGBQ8N7X0 1667 aa23.67■■□□□ 1.38
SMAD5-206ENST00000509962 RTEL1-TNFRSF6BF6WH68 1400 aa23.67■■□□□ 1.38
SMAD5-206ENST00000509962 CAMSAP1Q5T5Y3 1602 aa23.66■■□□□ 1.38
SMAD5-206ENST00000509962 NCKAP5LQ9HCH0 1330 aa23.66■■□□□ 1.38
SMAD5-206ENST00000509962 RSPH4AQ5TD94 716 aa23.66■■□□□ 1.38
SMAD5-206ENST00000509962 PTPRKQ15262 1439 aa23.64■■□□□ 1.37
SMAD5-206ENST00000509962 DHX29Q7Z478 1369 aaKnown RBP23.64■■□□□ 1.37
SMAD5-206ENST00000509962 KIF3BO15066 747 aa23.62■■□□□ 1.37
SMAD5-206ENST00000509962 PKD2Q13563 968 aa23.62■■□□□ 1.37
SMAD5-206ENST00000509962 NCOA2Q15596 1464 aa23.6■■□□□ 1.37
SMAD5-206ENST00000509962 TSPY4P0CV99 314 aa23.59■■□□□ 1.37
SMAD5-206ENST00000509962 TSPY10P0CW01 314 aa23.59■■□□□ 1.37
SMAD5-206ENST00000509962 LTBP4Q8N2S1 1624 aa23.59■■□□□ 1.37
SMAD5-206ENST00000509962 CCDC141Q6ZP82 1450 aa23.56■■□□□ 1.36
SMAD5-206ENST00000509962 MYO3AQ8NEV4 1616 aa23.56■■□□□ 1.36
SMAD5-206ENST00000509962 CAMSAP2Q08AD1 1489 aa23.56■■□□□ 1.36
SMAD5-206ENST00000509962 LOC105371045A0A1W2PR82 267 aa23.55■■□□□ 1.36
SMAD5-206ENST00000509962 CEP170BQ9Y4F5 1589 aaPredicted RBP23.55■■□□□ 1.36
SMAD5-206ENST00000509962 WASHC2CQ9Y4E1 1318 aa23.55■■□□□ 1.36
SMAD5-206ENST00000509962 PLA2R1Q13018 1463 aa23.55■■□□□ 1.36
SMAD5-206ENST00000509962 ZNF142P52746 1687 aaPredicted RBP23.54■■□□□ 1.36
SMAD5-206ENST00000509962 IQSEC2Q5JU85 1478 aa23.53■■□□□ 1.36
SMAD5-206ENST00000509962 ZNF335Q9H4Z2 1342 aaPredicted RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms