RNA–Protein interactions for RNA: ENST00000509803.1

LDB2-212, Transcript of LIM domain binding 2, humanhuman

TSL 2

Gene LDB2, Length 2,718 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-212ENST00000509803 ABCC10Q5T3U5 1492 aa13.16□□□□□ -0.3
LDB2-212ENST00000509803 AFAP1Q8N556 730 aa13.16□□□□□ -0.3
LDB2-212ENST00000509803 PTPN23Q9H3S7 1636 aa13.15□□□□□ -0.3
LDB2-212ENST00000509803 CD109Q6YHK3 1445 aa13.15□□□□□ -0.3
LDB2-212ENST00000509803 CDC42BPAQ5VT25 1732 aa13.13□□□□□ -0.31
LDB2-212ENST00000509803 TSPOAP1O95153 1857 aa13.13□□□□□ -0.31
LDB2-212ENST00000509803 PTPRKQ15262 1439 aa13.13□□□□□ -0.31
LDB2-212ENST00000509803 TSPY4P0CV99 314 aa13.13□□□□□ -0.31
LDB2-212ENST00000509803 TSPY10P0CW01 314 aa13.13□□□□□ -0.31
LDB2-212ENST00000509803 CAMSAP2Q08AD1 1489 aa13.13□□□□□ -0.31
LDB2-212ENST00000509803 RAPGEF3O95398 923 aa13.12□□□□□ -0.31
LDB2-212ENST00000509803 CCER1Q8TC90 406 aaPredicted RBP13.12□□□□□ -0.31
LDB2-212ENST00000509803 ZEB1P37275 1124 aaPredicted RBP13.12□□□□□ -0.31
LDB2-212ENST00000509803 PLCH2O75038 1416 aa13.11□□□□□ -0.31
LDB2-212ENST00000509803 MIA2Q96PC5 1412 aa13.11□□□□□ -0.31
LDB2-212ENST00000509803 CDC42BPBQ9Y5S2 1711 aa13.1□□□□□ -0.31
LDB2-212ENST00000509803 FANCAO15360 1455 aa13.1□□□□□ -0.31
LDB2-212ENST00000509803 MYO5CQ9NQX4 1742 aa13.09□□□□□ -0.31
LDB2-212ENST00000509803 ITSN2Q9NZM3 1697 aa13.08□□□□□ -0.32
LDB2-212ENST00000509803 TRIM52Q96A61 297 aa13.08□□□□□ -0.32
LDB2-212ENST00000509803 SYCP2Q9BX26 1530 aa13.07□□□□□ -0.32
LDB2-212ENST00000509803 ABCC5O15440 1437 aa13.07□□□□□ -0.32
LDB2-212ENST00000509803 MAPKBP1O60336 1514 aa13.07□□□□□ -0.32
LDB2-212ENST00000509803 DAPK1P53355 1430 aa13.07□□□□□ -0.32
LDB2-212ENST00000509803 SCAPERQ9BY12 1400 aa13.07□□□□□ -0.32
LDB2-212ENST00000509803 SAMD9LQ8IVG5 1584 aa13.06□□□□□ -0.32
LDB2-212ENST00000509803 PREX2Q70Z35 1606 aa13.06□□□□□ -0.32
LDB2-212ENST00000509803 TRAPPC8Q9Y2L5 1435 aa13.05□□□□□ -0.32
LDB2-212ENST00000509803 RAB3GAP2Q9H2M9 1393 aa13.05□□□□□ -0.32
LDB2-212ENST00000509803 ARHGEF12Q9NZN5 1544 aa13.05□□□□□ -0.32
LDB2-212ENST00000509803 ABCA9Q8IUA7 1624 aa13.04□□□□□ -0.32
LDB2-212ENST00000509803 ADGRL1O94910 1474 aa13.04□□□□□ -0.32
LDB2-212ENST00000509803 AKNAQ7Z591 1439 aa13.04□□□□□ -0.32
LDB2-212ENST00000509803 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.04□□□□□ -0.32
LDB2-212ENST00000509803 TCOF1Q13428 1488 aaKnown RBP13.04□□□□□ -0.32
LDB2-212ENST00000509803 SPAG9O60271 1321 aaKnown RBP13.03□□□□□ -0.32
LDB2-212ENST00000509803 DIP2BQ9P265 1576 aa13.03□□□□□ -0.32
LDB2-212ENST00000509803 C9orf84Q5VXU9 1444 aa13.01□□□□□ -0.33
LDB2-212ENST00000509803 SETD5Q9C0A6 1442 aa13.01□□□□□ -0.33
LDB2-212ENST00000509803 MBD5Q9P267 1494 aa13.01□□□□□ -0.33
LDB2-212ENST00000509803 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13□□□□□ -0.33
LDB2-212ENST00000509803 FOXD1Q16676 465 aa12.99□□□□□ -0.33
LDB2-212ENST00000509803 CCDC141Q6ZP82 1450 aa12.99□□□□□ -0.33
LDB2-212ENST00000509803 ANKRD30AQ9BXX3 1397 aa12.98□□□□□ -0.33
LDB2-212ENST00000509803 DNMT1P26358 1616 aaKnown RBP12.98□□□□□ -0.33
LDB2-212ENST00000509803 NAIPQ13075 1403 aa12.97□□□□□ -0.33
LDB2-212ENST00000509803 KIF15Q9NS87 1388 aa12.97□□□□□ -0.33
LDB2-212ENST00000509803 KIF13AQ9H1H9 1805 aa12.97□□□□□ -0.33
LDB2-212ENST00000509803 RSPH4AQ5TD94 716 aa12.97□□□□□ -0.33
LDB2-212ENST00000509803 NCOA1Q15788 1441 aa12.97□□□□□ -0.33
LDB2-212ENST00000509803 ABCC1P33527 1531 aa12.96□□□□□ -0.34
LDB2-212ENST00000509803 MAP3K4Q9Y6R4 1608 aa12.95□□□□□ -0.34
LDB2-212ENST00000509803 NEUROD1Q13562 356 aa12.95□□□□□ -0.34
LDB2-212ENST00000509803 MLECQ14165 292 aa12.95□□□□□ -0.34
LDB2-212ENST00000509803 PLEKHH2Q8IVE3 1493 aa12.95□□□□□ -0.34
LDB2-212ENST00000509803 KDM6BO15054 1643 aa12.94□□□□□ -0.34
LDB2-212ENST00000509803 KIAA1107Q9UPP5 1409 aa12.94□□□□□ -0.34
LDB2-212ENST00000509803 HFM1A2PYH4 1435 aa12.94□□□□□ -0.34
LDB2-212ENST00000509803 KIF3BO15066 747 aa12.94□□□□□ -0.34
LDB2-212ENST00000509803 GGT6Q6P531 493 aa12.94□□□□□ -0.34
LDB2-212ENST00000509803 DENND4BO75064 1496 aaPredicted RBP12.93□□□□□ -0.34
LDB2-212ENST00000509803 ANKRD50Q9ULJ7 1429 aa12.92□□□□□ -0.34
LDB2-212ENST00000509803 SLC4A1APQ9BWU0 796 aaKnown RBP12.92□□□□□ -0.34
LDB2-212ENST00000509803 COL17A1Q9UMD9 1497 aaPredicted RBP12.92□□□□□ -0.34
LDB2-212ENST00000509803 GLI2P10070 1586 aa12.92□□□□□ -0.34
LDB2-212ENST00000509803 PLPPR3Q6T4P5 718 aa12.91□□□□□ -0.34
LDB2-212ENST00000509803 SIN3AQ96ST3 1273 aa12.9□□□□□ -0.34
LDB2-212ENST00000509803 ARID4BQ4LE39 1312 aaPredicted RBP12.9□□□□□ -0.34
LDB2-212ENST00000509803 ZNF518AQ6AHZ1 1483 aa12.9□□□□□ -0.34
LDB2-212ENST00000509803 POGZQ7Z3K3 1410 aa12.89□□□□□ -0.35
LDB2-212ENST00000509803 TEX14Q8IWB6 1497 aa12.89□□□□□ -0.35
LDB2-212ENST00000509803 NEO1Q92859 1461 aa12.89□□□□□ -0.35
LDB2-212ENST00000509803 ARAP3Q8WWN8 1544 aa12.89□□□□□ -0.35
LDB2-212ENST00000509803 NUP155O75694 1391 aa12.89□□□□□ -0.35
LDB2-212ENST00000509803 YEATS2Q9ULM3 1422 aa12.89□□□□□ -0.35
LDB2-212ENST00000509803 ARHGEF5Q12774 1597 aa12.89□□□□□ -0.35
LDB2-212ENST00000509803 ROCK1Q13464 1354 aa12.89□□□□□ -0.35
LDB2-212ENST00000509803 PPRC1Q5VV67 1664 aaKnown RBP12.89□□□□□ -0.35
LDB2-212ENST00000509803 DHX57Q6P158 1386 aaKnown RBP12.89□□□□□ -0.35
LDB2-212ENST00000509803 CROCC2H7BZ55 1655 aa12.88□□□□□ -0.35
LDB2-212ENST00000509803 MPHOSPH9Q99550 1183 aa12.88□□□□□ -0.35
LDB2-212ENST00000509803 ATP7AQ04656 1500 aa12.86□□□□□ -0.35
LDB2-212ENST00000509803 PKD2Q13563 968 aa12.85□□□□□ -0.35
LDB2-212ENST00000509803 CFAP74Q9C0B2 1584 aa12.85□□□□□ -0.35
LDB2-212ENST00000509803 SHANK2Q9UPX8 1470 aa12.85□□□□□ -0.35
LDB2-212ENST00000509803 ADGBQ8N7X0 1667 aa12.84□□□□□ -0.35
LDB2-212ENST00000509803 ZFYVE16Q7Z3T8 1539 aa12.84□□□□□ -0.35
LDB2-212ENST00000509803 ADGRL2O95490 1459 aa12.84□□□□□ -0.35
LDB2-212ENST00000509803 KIDINS220Q9ULH0 1771 aa12.82□□□□□ -0.36
LDB2-212ENST00000509803 DHX29Q7Z478 1369 aaKnown RBP12.81□□□□□ -0.36
LDB2-212ENST00000509803 GCC2Q8IWJ2 1684 aa12.81□□□□□ -0.36
LDB2-212ENST00000509803 RTEL1-TNFRSF6BF6WH68 1400 aa12.8□□□□□ -0.36
LDB2-212ENST00000509803 A2MP01023 1474 aa12.8□□□□□ -0.36
LDB2-212ENST00000509803 RICTORQ6R327 1708 aa12.8□□□□□ -0.36
LDB2-212ENST00000509803 WASHC2CQ9Y4E1 1318 aa12.8□□□□□ -0.36
LDB2-212ENST00000509803 HECW2Q9P2P5 1572 aa12.79□□□□□ -0.36
LDB2-212ENST00000509803 SENP3Q9H4L4 574 aaPredicted RBP12.79□□□□□ -0.36
LDB2-212ENST00000509803 DUOX2Q9NRD8 1548 aa12.78□□□□□ -0.36
LDB2-212ENST00000509803 FRMPD1Q5SYB0 1578 aa12.78□□□□□ -0.36
LDB2-212ENST00000509803 MLH3Q9UHC1 1453 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms