RNA–Protein interactions for RNA: ENST00000509801.1

STRCP1-201, Transcript of stereocilin pseudogene 1, humanhuman

BASIC

Gene STRCP1, Length 5,328 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRCP1-201ENST00000509801 VPS8Q8N3P4 1428 aa17.26■□□□□ 0.35
STRCP1-201ENST00000509801 NAP1L2Q9ULW6 460 aaPredicted RBP17.25■□□□□ 0.35
STRCP1-201ENST00000509801 IPO8O15397 1037 aaKnown RBP17.25■□□□□ 0.35
STRCP1-201ENST00000509801 CHAF1AQ13111 956 aaPredicted RBP17.24■□□□□ 0.35
STRCP1-201ENST00000509801 RTF1Q92541 710 aaKnown RBP17.23■□□□□ 0.35
STRCP1-201ENST00000509801 HDGFL2Q7Z4V5 671 aaPredicted RBP17.23■□□□□ 0.35
STRCP1-201ENST00000509801 CALD1Q05682 793 aaKnown RBP17.22■□□□□ 0.35
STRCP1-201ENST00000509801 SOGA1O94964 1423 aa17.22■□□□□ 0.35
STRCP1-201ENST00000509801 PTMSP20962 102 aa17.22■□□□□ 0.35
STRCP1-201ENST00000509801 RALBP1Q15311 655 aa17.22■□□□□ 0.35
STRCP1-201ENST00000509801 TULP1O00294 542 aaPredicted RBP17.21■□□□□ 0.35
STRCP1-201ENST00000509801 PKD2Q13563 968 aa17.21■□□□□ 0.35
STRCP1-201ENST00000509801 TRHP20396 242 aaPredicted RBP17.21■□□□□ 0.34
STRCP1-201ENST00000509801 TAOK2Q9UL54 1235 aa17.21■□□□□ 0.34
STRCP1-201ENST00000509801 MSNP26038 577 aaKnown RBP17.2■□□□□ 0.34
STRCP1-201ENST00000509801 RTN4Q9NQC3 1192 aaKnown RBP17.18■□□□□ 0.34
STRCP1-201ENST00000509801 CARMIL2Q6F5E8 1435 aa17.18■□□□□ 0.34
STRCP1-201ENST00000509801 RWDD1Q9H446 243 aaPredicted RBP17.17■□□□□ 0.34
STRCP1-201ENST00000509801 ROCK2O75116 1388 aaKnown RBP17.16■□□□□ 0.34
STRCP1-201ENST00000509801 RCAN3Q9UKA8 241 aa17.16■□□□□ 0.34
STRCP1-201ENST00000509801 KIAA1211Q6ZU35 1233 aa17.15■□□□□ 0.34
STRCP1-201ENST00000509801 GBP4Q96PP9 640 aa17.15■□□□□ 0.34
STRCP1-201ENST00000509801 RBM19Q9Y4C8 960 aaKnown RBP17.15■□□□□ 0.34
STRCP1-201ENST00000509801 TCERG1O14776 1098 aaKnown RBP17.14■□□□□ 0.33
STRCP1-201ENST00000509801 EIF3AQ14152 1382 aaKnown RBP17.14■□□□□ 0.33
STRCP1-201ENST00000509801 CHMP4AQ9BY43 222 aa17.14■□□□□ 0.33
STRCP1-201ENST00000509801 FMN1Q68DA7 1419 aa17.14■□□□□ 0.33
STRCP1-201ENST00000509801 CECR2Q9BXF3 1484 aa17.14■□□□□ 0.33
STRCP1-201ENST00000509801 SOX12O15370 315 aa17.14■□□□□ 0.33
STRCP1-201ENST00000509801 SAFB2Q14151 953 aaKnown RBP eCLIP17.14■□□□□ 0.33
STRCP1-201ENST00000509801 ANKRD30AQ9BXX3 1397 aa17.13■□□□□ 0.33
STRCP1-201ENST00000509801 DRC7Q8IY82 874 aa17.12■□□□□ 0.33
STRCP1-201ENST00000509801 MPHOSPH9Q99550 1183 aa17.12■□□□□ 0.33
STRCP1-201ENST00000509801 DEKP35659 375 aaKnown RBP17.11■□□□□ 0.33
STRCP1-201ENST00000509801 U2AF1L5P0DN76 240 aaPredicted RBP17.11■□□□□ 0.33
STRCP1-201ENST00000509801 U2AF1Q01081 240 aaKnown RBP eCLIP17.11■□□□□ 0.33
STRCP1-201ENST00000509801 MLECQ14165 292 aa17.11■□□□□ 0.33
STRCP1-201ENST00000509801 RAB3GAP2Q9H2M9 1393 aa17.11■□□□□ 0.33
STRCP1-201ENST00000509801 GGT6Q6P531 493 aa17.11■□□□□ 0.33
STRCP1-201ENST00000509801 SPRYD3Q8NCJ5 442 aa17.11■□□□□ 0.33
STRCP1-201ENST00000509801 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
STRCP1-201ENST00000509801 NUP155O75694 1391 aa17.1■□□□□ 0.33
STRCP1-201ENST00000509801 ITPRIPQ8IWB1 547 aa17.1■□□□□ 0.33
STRCP1-201ENST00000509801 GNL2Q13823 731 aaKnown RBP17.09■□□□□ 0.33
STRCP1-201ENST00000509801 STK26Q9P289 416 aa17.09■□□□□ 0.33
STRCP1-201ENST00000509801 KANK4Q5T7N3 995 aaPredicted RBP17.09■□□□□ 0.33
STRCP1-201ENST00000509801 HTATSF1O43719 755 aaKnown RBP17.09■□□□□ 0.33
STRCP1-201ENST00000509801 EFCAB2Q5VUJ9 269 aa17.07■□□□□ 0.32
STRCP1-201ENST00000509801 FOXD1Q16676 465 aa17.07■□□□□ 0.32
STRCP1-201ENST00000509801 APBB1O00213 710 aa17.05■□□□□ 0.32
STRCP1-201ENST00000509801 SYAP1Q96A49 352 aaPredicted RBP17.05■□□□□ 0.32
STRCP1-201ENST00000509801 HDAC5Q9UQL6 1122 aa17.05■□□□□ 0.32
STRCP1-201ENST00000509801 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
STRCP1-201ENST00000509801 SPAG9O60271 1321 aaKnown RBP17.04■□□□□ 0.32
STRCP1-201ENST00000509801 PDE3BQ13370 1112 aa17.03■□□□□ 0.32
STRCP1-201ENST00000509801 KIAA2012Q0VF49 1180 aa17.03■□□□□ 0.32
STRCP1-201ENST00000509801 STK31Q9BXU1 1019 aa17.03■□□□□ 0.32
STRCP1-201ENST00000509801 PDS5BQ9NTI5 1447 aa17.03■□□□□ 0.32
STRCP1-201ENST00000509801 SMARCA2P51531 1590 aa17.02■□□□□ 0.32
STRCP1-201ENST00000509801 HMMRO75330 724 aa17.02■□□□□ 0.31
STRCP1-201ENST00000509801 TERF2IPQ9NYB0 399 aa17.02■□□□□ 0.31
STRCP1-201ENST00000509801 GPATCH3Q96I76 525 aa17.01■□□□□ 0.31
STRCP1-201ENST00000509801 PHLDB1Q86UU1 1377 aa17■□□□□ 0.31
STRCP1-201ENST00000509801 NLRP13Q86W25 1043 aa17■□□□□ 0.31
STRCP1-201ENST00000509801 SMC4Q9NTJ3 1288 aa17■□□□□ 0.31
STRCP1-201ENST00000509801 ABCC8Q09428 1581 aa16.99■□□□□ 0.31
STRCP1-201ENST00000509801 PAK3O75914 559 aaPredicted RBP16.99■□□□□ 0.31
STRCP1-201ENST00000509801 RSPH4AQ5TD94 716 aa16.99■□□□□ 0.31
STRCP1-201ENST00000509801 ISY1Q9ULR0 285 aaKnown RBP16.99■□□□□ 0.31
STRCP1-201ENST00000509801 LMOD3Q0VAK6 560 aa16.98■□□□□ 0.31
STRCP1-201ENST00000509801 CSB-PGBD3P0DP91 1061 aa16.98■□□□□ 0.31
STRCP1-201ENST00000509801 CLSTN1O94985 981 aa16.97■□□□□ 0.31
STRCP1-201ENST00000509801 TPM4P67936 248 aa16.97■□□□□ 0.31
STRCP1-201ENST00000509801 SLKQ9H2G2 1235 aaPredicted RBP16.97■□□□□ 0.31
STRCP1-201ENST00000509801 CSPP1Q1MSJ5 1256 aa16.96■□□□□ 0.31
STRCP1-201ENST00000509801 CENPJQ9HC77 1338 aaPredicted RBP16.96■□□□□ 0.31
STRCP1-201ENST00000509801 MFAP1P55081 439 aaKnown RBP16.96■□□□□ 0.31
STRCP1-201ENST00000509801 CCDC34Q96HJ3 373 aa16.95■□□□□ 0.3
STRCP1-201ENST00000509801 IPO9Q96P70 1041 aaKnown RBP16.95■□□□□ 0.3
STRCP1-201ENST00000509801 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
STRCP1-201ENST00000509801 L3MBTL2Q969R5 705 aa16.95■□□□□ 0.3
STRCP1-201ENST00000509801 CCDC18Q5T9S5 1454 aa16.94■□□□□ 0.3
STRCP1-201ENST00000509801 GOLGA6L3A6NEY3 463 aa16.94■□□□□ 0.3
STRCP1-201ENST00000509801 GORABQ5T7V8 394 aa16.93■□□□□ 0.3
STRCP1-201ENST00000509801 KIF15Q9NS87 1388 aa16.93■□□□□ 0.3
STRCP1-201ENST00000509801 KIF3BO15066 747 aa16.93■□□□□ 0.3
STRCP1-201ENST00000509801 GZF1Q9H116 711 aaPredicted RBP16.93■□□□□ 0.3
STRCP1-201ENST00000509801 TRIM6-TRIM34B2RNG4 842 aa16.91■□□□□ 0.3
STRCP1-201ENST00000509801 TDRD9Q8NDG6 1382 aaKnown RBP16.91■□□□□ 0.3
STRCP1-201ENST00000509801 RAPGEF2Q9Y4G8 1499 aa16.91■□□□□ 0.3
STRCP1-201ENST00000509801 ZNF330Q9Y3S2 320 aaPredicted RBP16.9■□□□□ 0.3
STRCP1-201ENST00000509801 HSP90B1P14625 803 aaKnown RBP16.89■□□□□ 0.29
STRCP1-201ENST00000509801 MYBBP1AQ9BQG0 1328 aaKnown RBP16.89■□□□□ 0.29
STRCP1-201ENST00000509801 TAF7LQ5H9L4 462 aa16.89■□□□□ 0.29
STRCP1-201ENST00000509801 CCDC146Q8IYE0 955 aa16.88■□□□□ 0.29
STRCP1-201ENST00000509801 EID1Q9Y6B2 187 aa16.88■□□□□ 0.29
STRCP1-201ENST00000509801 HNRNPMP52272 730 aaKnown RBP eCLIP16.88■□□□□ 0.29
STRCP1-201ENST00000509801 TMX4Q9H1E5 349 aaPredicted RBP16.88■□□□□ 0.29
STRCP1-201ENST00000509801 ST18O60284 1047 aa16.87■□□□□ 0.29
STRCP1-201ENST00000509801 TSHZ2Q9NRE2 1034 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms