RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 TRHP20396 242 aaPredicted RBP21.19■□□□□ 0.98
CYSTM1-204ENST00000509789 PLCH2O75038 1416 aa21.19■□□□□ 0.98
CYSTM1-204ENST00000509789 EFCAB2Q5VUJ9 269 aa21.17■□□□□ 0.98
CYSTM1-204ENST00000509789 MIA2Q96PC5 1412 aa21.16■□□□□ 0.98
CYSTM1-204ENST00000509789 ZNF777Q9ULD5 760 aaPredicted RBP21.16■□□□□ 0.98
CYSTM1-204ENST00000509789 FGD6Q6ZV73 1430 aa21.15■□□□□ 0.98
CYSTM1-204ENST00000509789 ITSN2Q9NZM3 1697 aa21.14■□□□□ 0.97
CYSTM1-204ENST00000509789 MYO5CQ9NQX4 1742 aa21.13■□□□□ 0.97
CYSTM1-204ENST00000509789 ARHGAP5Q13017 1502 aa21.13■□□□□ 0.97
CYSTM1-204ENST00000509789 CDC42BPAQ5VT25 1732 aa21.12■□□□□ 0.97
CYSTM1-204ENST00000509789 FAM50AQ14320 339 aaKnown RBP21.12■□□□□ 0.97
CYSTM1-204ENST00000509789 ARAP3Q8WWN8 1544 aa21.11■□□□□ 0.97
CYSTM1-204ENST00000509789 PREX2Q70Z35 1606 aa21.11■□□□□ 0.97
CYSTM1-204ENST00000509789 MAP3K4Q9Y6R4 1608 aa21.11■□□□□ 0.97
CYSTM1-204ENST00000509789 RRBP1Q9P2E9 1410 aaKnown RBP21.1■□□□□ 0.97
CYSTM1-204ENST00000509789 KIF13AQ9H1H9 1805 aa21.09■□□□□ 0.97
CYSTM1-204ENST00000509789 ZNF644Q9H582 1327 aaPredicted RBP21.08■□□□□ 0.97
CYSTM1-204ENST00000509789 TRIM26Q12899 539 aaPredicted RBP21.08■□□□□ 0.97
CYSTM1-204ENST00000509789 CDC42BPBQ9Y5S2 1711 aa21.08■□□□□ 0.97
CYSTM1-204ENST00000509789 FANCAO15360 1455 aa21.07■□□□□ 0.96
CYSTM1-204ENST00000509789 PTPN23Q9H3S7 1636 aa21.05■□□□□ 0.96
CYSTM1-204ENST00000509789 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.05■□□□□ 0.968e-6■■□□□ 11.9
CYSTM1-204ENST00000509789 TCOF1Q13428 1488 aaKnown RBP21.04■□□□□ 0.96
CYSTM1-204ENST00000509789 TEX14Q8IWB6 1497 aa21.04■□□□□ 0.96
CYSTM1-204ENST00000509789 CAMSAP2Q08AD1 1489 aa21.03■□□□□ 0.96
CYSTM1-204ENST00000509789 PLEKHH2Q8IVE3 1493 aa21.03■□□□□ 0.96
CYSTM1-204ENST00000509789 AKNAQ7Z591 1439 aa21.03■□□□□ 0.96
CYSTM1-204ENST00000509789 NEO1Q92859 1461 aa21.02■□□□□ 0.96
CYSTM1-204ENST00000509789 HNRNPMP52272 730 aaKnown RBP eCLIP21.02■□□□□ 0.96
CYSTM1-204ENST00000509789 TSPOAP1O95153 1857 aa21.02■□□□□ 0.96
CYSTM1-204ENST00000509789 CFAP74Q9C0B2 1584 aa21.01■□□□□ 0.95
CYSTM1-204ENST00000509789 RSPH4AQ5TD94 716 aa21■□□□□ 0.95
CYSTM1-204ENST00000509789 KIAA1107Q9UPP5 1409 aa21■□□□□ 0.95
CYSTM1-204ENST00000509789 SAMD9LQ8IVG5 1584 aa20.99■□□□□ 0.95
CYSTM1-204ENST00000509789 ITGAEP38570 1179 aa20.98■□□□□ 0.95
CYSTM1-204ENST00000509789 SCAPERQ9BY12 1400 aa20.97■□□□□ 0.95
CYSTM1-204ENST00000509789 ADGRL1O94910 1474 aa20.97■□□□□ 0.95
CYSTM1-204ENST00000509789 PPRC1Q5VV67 1664 aaKnown RBP20.96■□□□□ 0.95
CYSTM1-204ENST00000509789 ABCC1P33527 1531 aa20.94■□□□□ 0.94
CYSTM1-204ENST00000509789 TSPY4P0CV99 314 aa20.94■□□□□ 0.94
CYSTM1-204ENST00000509789 TSPY10P0CW01 314 aa20.94■□□□□ 0.94
CYSTM1-204ENST00000509789 MBD5Q9P267 1494 aa20.94■□□□□ 0.94
CYSTM1-204ENST00000509789 SYCP2Q9BX26 1530 aa20.94■□□□□ 0.94
CYSTM1-204ENST00000509789 ARHGEF12Q9NZN5 1544 aa20.93■□□□□ 0.94
CYSTM1-204ENST00000509789 ABCC5O15440 1437 aa20.91■□□□□ 0.94
CYSTM1-204ENST00000509789 AFAP1Q8N556 730 aa20.91■□□□□ 0.94
CYSTM1-204ENST00000509789 ARHGEF5Q12774 1597 aa20.9■□□□□ 0.94
CYSTM1-204ENST00000509789 DENND4BO75064 1496 aaPredicted RBP20.9■□□□□ 0.94
CYSTM1-204ENST00000509789 CCDC141Q6ZP82 1450 aa20.9■□□□□ 0.94
CYSTM1-204ENST00000509789 DAPK1P53355 1430 aa20.9■□□□□ 0.94
CYSTM1-204ENST00000509789 TRAPPC8Q9Y2L5 1435 aa20.9■□□□□ 0.94
CYSTM1-204ENST00000509789 PCGF6Q9BYE7 350 aa20.89■□□□□ 0.93
CYSTM1-204ENST00000509789 RAPGEF3O95398 923 aa20.88■□□□□ 0.93
CYSTM1-204ENST00000509789 CHIC2Q9UKJ5 165 aa20.88■□□□□ 0.93
CYSTM1-204ENST00000509789 DNMT1P26358 1616 aaKnown RBP20.88■□□□□ 0.93
CYSTM1-204ENST00000509789 SPAG9O60271 1321 aaKnown RBP20.86■□□□□ 0.93
CYSTM1-204ENST00000509789 ZNF518AQ6AHZ1 1483 aa20.86■□□□□ 0.93
CYSTM1-204ENST00000509789 POGZQ7Z3K3 1410 aa20.86■□□□□ 0.93
CYSTM1-204ENST00000509789 MYT1LQ9UL68 1186 aa20.85■□□□□ 0.93
CYSTM1-204ENST00000509789 MAPK8IP2Q13387 824 aaPredicted RBP20.84■□□□□ 0.93
CYSTM1-204ENST00000509789 PTPRKQ15262 1439 aa20.84■□□□□ 0.93
CYSTM1-204ENST00000509789 C9orf84Q5VXU9 1444 aa20.83■□□□□ 0.93
CYSTM1-204ENST00000509789 SHANK2Q9UPX8 1470 aa20.82■□□□□ 0.92
CYSTM1-204ENST00000509789 ANKRD30AQ9BXX3 1397 aa20.8■□□□□ 0.92
CYSTM1-204ENST00000509789 COL17A1Q9UMD9 1497 aaPredicted RBP20.8■□□□□ 0.92
CYSTM1-204ENST00000509789 RTEL1-TNFRSF6BF6WH68 1400 aa20.79■□□□□ 0.92
CYSTM1-204ENST00000509789 ROCK1Q13464 1354 aa20.79■□□□□ 0.92
CYSTM1-204ENST00000509789 RRP7BPQ9NSQ0 103 aa20.78■□□□□ 0.92
CYSTM1-204ENST00000509789 CROCC2H7BZ55 1655 aa20.77■□□□□ 0.92
CYSTM1-204ENST00000509789 KDM5CP41229 1560 aa20.76■□□□□ 0.91
CYSTM1-204ENST00000509789 MAST1Q9Y2H9 1570 aa20.76■□□□□ 0.91
CYSTM1-204ENST00000509789 MLH3Q9UHC1 1453 aa20.76■□□□□ 0.91
CYSTM1-204ENST00000509789 RICTORQ6R327 1708 aa20.76■□□□□ 0.91
CYSTM1-204ENST00000509789 NCOA1Q15788 1441 aa20.76■□□□□ 0.91
CYSTM1-204ENST00000509789 ADGRL2O95490 1459 aa20.75■□□□□ 0.91
CYSTM1-204ENST00000509789 DMRT2Q9Y5R5 561 aa20.74■□□□□ 0.91
CYSTM1-204ENST00000509789 KDM6BO15054 1643 aa20.74■□□□□ 0.91
CYSTM1-204ENST00000509789 FRMPD1Q5SYB0 1578 aa20.73■□□□□ 0.91
CYSTM1-204ENST00000509789 ATP7AQ04656 1500 aa20.73■□□□□ 0.91
CYSTM1-204ENST00000509789 MAGI2Q86UL8 1455 aa20.72■□□□□ 0.91
CYSTM1-204ENST00000509789 KIF15Q9NS87 1388 aa20.72■□□□□ 0.91
CYSTM1-204ENST00000509789 ZMYM4Q5VZL5 1548 aa20.71■□□□□ 0.91
CYSTM1-204ENST00000509789 ZFYVE16Q7Z3T8 1539 aa20.71■□□□□ 0.91
CYSTM1-204ENST00000509789 HECW2Q9P2P5 1572 aa20.71■□□□□ 0.91
CYSTM1-204ENST00000509789 ADGBQ8N7X0 1667 aa20.7■□□□□ 0.91
CYSTM1-204ENST00000509789 HFM1A2PYH4 1435 aa20.7■□□□□ 0.9
CYSTM1-204ENST00000509789 INO80Q9ULG1 1556 aaPredicted RBP20.7■□□□□ 0.9
CYSTM1-204ENST00000509789 SETD5Q9C0A6 1442 aa20.69■□□□□ 0.9
CYSTM1-204ENST00000509789 KIDINS220Q9ULH0 1771 aa20.68■□□□□ 0.9
CYSTM1-204ENST00000509789 NAIPQ13075 1403 aa20.68■□□□□ 0.9
CYSTM1-204ENST00000509789 PLXNC1O60486 1568 aa20.68■□□□□ 0.9
CYSTM1-204ENST00000509789 YEATS2Q9ULM3 1422 aa20.66■□□□□ 0.9
CYSTM1-204ENST00000509789 DUOX2Q9NRD8 1548 aa20.64■□□□□ 0.9
CYSTM1-204ENST00000509789 ANKRD50Q9ULJ7 1429 aa20.64■□□□□ 0.89
CYSTM1-204ENST00000509789 DHX29Q7Z478 1369 aaKnown RBP20.64■□□□□ 0.89
CYSTM1-204ENST00000509789 ATP10AO60312 1499 aa20.63■□□□□ 0.89
CYSTM1-204ENST00000509789 A2MP01023 1474 aa20.62■□□□□ 0.89
CYSTM1-204ENST00000509789 HRCP23327 699 aa20.62■□□□□ 0.89
CYSTM1-204ENST00000509789 RAB3GAP2Q9H2M9 1393 aa20.6■□□□□ 0.89
CYSTM1-204ENST00000509789 DIP2CQ9Y2E4 1556 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms