RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 LRRIQ1Q96JM4 1722 aa26.45■■□□□ 1.83
RAB40C-202ENST00000509637 POGZQ7Z3K3 1410 aa26.45■■□□□ 1.82
RAB40C-202ENST00000509637 PCF11O94913 1555 aaKnown RBP26.45■■□□□ 1.82
RAB40C-202ENST00000509637 FMN1Q68DA7 1419 aa26.44■■□□□ 1.82
RAB40C-202ENST00000509637 HSPA2P54652 639 aa26.41■■□□□ 1.82
RAB40C-202ENST00000509637 MLECQ14165 292 aa26.41■■□□□ 1.82
RAB40C-202ENST00000509637 PLPPR3Q6T4P5 718 aa26.41■■□□□ 1.82
RAB40C-202ENST00000509637 MAGI2Q86UL8 1455 aa26.41■■□□□ 1.82
RAB40C-202ENST00000509637 EFCAB2Q5VUJ9 269 aa26.38■■□□□ 1.81
RAB40C-202ENST00000509637 TROQ12816 1431 aaPredicted RBP26.38■■□□□ 1.81
RAB40C-202ENST00000509637 AFAP1Q8N556 730 aa26.36■■□□□ 1.81
RAB40C-202ENST00000509637 MYO5CQ9NQX4 1742 aa26.36■■□□□ 1.81
RAB40C-202ENST00000509637 ATP10AO60312 1499 aa26.34■■□□□ 1.81
RAB40C-202ENST00000509637 FBXO41Q8TF61 875 aa26.33■■□□□ 1.81
RAB40C-202ENST00000509637 ARHGEF12Q9NZN5 1544 aa26.3■■□□□ 1.8
RAB40C-202ENST00000509637 CDK11AQ9UQ88 783 aaPredicted RBP26.3■■□□□ 1.8
RAB40C-202ENST00000509637 CEBPAP49715 358 aaPredicted RBP26.29■■□□□ 1.8
RAB40C-202ENST00000509637 CDC42BPBQ9Y5S2 1711 aa26.28■■□□□ 1.8
RAB40C-202ENST00000509637 FER1L4A9Z1Z3 1794 aa26.28■■□□□ 1.8
RAB40C-202ENST00000509637 C9orf84Q5VXU9 1444 aa26.27■■□□□ 1.8
RAB40C-202ENST00000509637 KDM5CP41229 1560 aa26.26■■□□□ 1.79
RAB40C-202ENST00000509637 ARHGAP5Q13017 1502 aa26.26■■□□□ 1.79
RAB40C-202ENST00000509637 CASKIN1Q8WXD9 1431 aa26.23■■□□□ 1.79
RAB40C-202ENST00000509637 TRAPPC8Q9Y2L5 1435 aa26.23■■□□□ 1.79
RAB40C-202ENST00000509637 ZNF518AQ6AHZ1 1483 aa26.23■■□□□ 1.79
RAB40C-202ENST00000509637 DIP2CQ9Y2E4 1556 aa26.2■■□□□ 1.79
RAB40C-202ENST00000509637 CLIP1P30622 1438 aa26.2■■□□□ 1.78
RAB40C-202ENST00000509637 ABCA6Q8N139 1617 aa26.17■■□□□ 1.78
RAB40C-202ENST00000509637 PREX2Q70Z35 1606 aa26.15■■□□□ 1.78
RAB40C-202ENST00000509637 MLH3Q9UHC1 1453 aa26.15■■□□□ 1.78
RAB40C-202ENST00000509637 ABCC1P33527 1531 aa26.14■■□□□ 1.78
RAB40C-202ENST00000509637 CDC42BPAQ5VT25 1732 aa26.11■■□□□ 1.77
RAB40C-202ENST00000509637 CCDC18Q5T9S5 1454 aa26.11■■□□□ 1.77
RAB40C-202ENST00000509637 ITSN2Q9NZM3 1697 aa26.1■■□□□ 1.77
RAB40C-202ENST00000509637 REREQ9P2R6 1566 aa26.1■■□□□ 1.77
RAB40C-202ENST00000509637 MYT1LQ9UL68 1186 aa26.09■■□□□ 1.77
RAB40C-202ENST00000509637 KIDINS220Q9ULH0 1771 aa26.09■■□□□ 1.77
RAB40C-202ENST00000509637 PREX1Q8TCU6 1659 aa26.06■■□□□ 1.76
RAB40C-202ENST00000509637 STRCQ7RTU9 1775 aa26.06■■□□□ 1.76
RAB40C-202ENST00000509637 CERKQ8TCT0 537 aa26.06■■□□□ 1.76
RAB40C-202ENST00000509637 FYCO1Q9BQS8 1478 aa26.05■■□□□ 1.76
RAB40C-202ENST00000509637 AGLP35573 1532 aa26.05■■□□□ 1.76
RAB40C-202ENST00000509637 GPATCH8Q9UKJ3 1502 aaKnown RBP26.05■■□□□ 1.76
RAB40C-202ENST00000509637 SAMD9LQ8IVG5 1584 aa26.03■■□□□ 1.76
RAB40C-202ENST00000509637 C3P01024 1663 aa26.03■■□□□ 1.76
RAB40C-202ENST00000509637 HNRNPMP52272 730 aaKnown RBP eCLIP26.02■■□□□ 1.76
RAB40C-202ENST00000509637 ZNF777Q9ULD5 760 aaPredicted RBP26.02■■□□□ 1.76
RAB40C-202ENST00000509637 SETD1BQ9UPS6 1966 aaKnown RBP26.01■■□□□ 1.75
RAB40C-202ENST00000509637 SYCP2Q9BX26 1530 aa25.97■■□□□ 1.75
RAB40C-202ENST00000509637 UHRF1BP1Q6BDS2 1440 aa25.96■■□□□ 1.75
RAB40C-202ENST00000509637 ZNF644Q9H582 1327 aaPredicted RBP25.91■■□□□ 1.74
RAB40C-202ENST00000509637 SPAG9O60271 1321 aaKnown RBP25.9■■□□□ 1.74
RAB40C-202ENST00000509637 CFDP1Q9UEE9 299 aaPredicted RBP25.88■■□□□ 1.73
RAB40C-202ENST00000509637 KIAA1107Q9UPP5 1409 aa25.88■■□□□ 1.73
RAB40C-202ENST00000509637 SUPT6HQ7KZ85 1726 aaKnown RBP25.86■■□□□ 1.73
RAB40C-202ENST00000509637 ZMYM3Q14202 1370 aa25.85■■□□□ 1.73
RAB40C-202ENST00000509637 CCNB3Q8WWL7 1395 aa25.84■■□□□ 1.73
RAB40C-202ENST00000509637 ATP7AQ04656 1500 aa25.84■■□□□ 1.73
RAB40C-202ENST00000509637 INO80Q9ULG1 1556 aaPredicted RBP25.84■■□□□ 1.73
RAB40C-202ENST00000509637 CNTLNQ9NXG0 1405 aa25.83■■□□□ 1.73
RAB40C-202ENST00000509637 ESF1Q9H501 851 aaKnown RBP25.83■■□□□ 1.73
RAB40C-202ENST00000509637 PLXNC1O60486 1568 aa25.82■■□□□ 1.72
RAB40C-202ENST00000509637 PTPRTO14522 1441 aa25.82■■□□□ 1.72
RAB40C-202ENST00000509637 DMRT2Q9Y5R5 561 aa25.82■■□□□ 1.72
RAB40C-202ENST00000509637 MTUS2Q5JR59 1369 aa25.82■■□□□ 1.72
RAB40C-202ENST00000509637 MBD5Q9P267 1494 aa25.81■■□□□ 1.72
RAB40C-202ENST00000509637 TIAM1Q13009 1591 aa25.81■■□□□ 1.72
RAB40C-202ENST00000509637 A2MP01023 1474 aa25.8■■□□□ 1.72
RAB40C-202ENST00000509637 NCOA1Q15788 1441 aa25.8■■□□□ 1.72
RAB40C-202ENST00000509637 LTBP4Q8N2S1 1624 aa25.79■■□□□ 1.72
RAB40C-202ENST00000509637 MROH2AA6NES4 1674 aa25.78■■□□□ 1.72
RAB40C-202ENST00000509637 NPATQ14207 1427 aa25.77■■□□□ 1.72
RAB40C-202ENST00000509637 PLEKHH2Q8IVE3 1493 aa25.77■■□□□ 1.72
RAB40C-202ENST00000509637 CLTCQ00610 1675 aaKnown RBP25.76■■□□□ 1.71
RAB40C-202ENST00000509637 GGT6Q6P531 493 aa25.75■■□□□ 1.71
RAB40C-202ENST00000509637 PTPRKQ15262 1439 aa25.74■■□□□ 1.71
RAB40C-202ENST00000509637 NCKAP5LQ9HCH0 1330 aa25.74■■□□□ 1.71
RAB40C-202ENST00000509637 CAMSAP1Q5T5Y3 1602 aa25.74■■□□□ 1.71
RAB40C-202ENST00000509637 CEP162Q5TB80 1403 aa25.72■■□□□ 1.71
RAB40C-202ENST00000509637 EHBP1L1Q8N3D4 1523 aa25.7■■□□□ 1.7
RAB40C-202ENST00000509637 ADGBQ8N7X0 1667 aa25.65■■□□□ 1.7
RAB40C-202ENST00000509637 RTEL1-TNFRSF6BF6WH68 1400 aa25.64■■□□□ 1.7
RAB40C-202ENST00000509637 MYO3AQ8NEV4 1616 aa25.64■■□□□ 1.7
RAB40C-202ENST00000509637 DHX29Q7Z478 1369 aaKnown RBP25.64■■□□□ 1.69
RAB40C-202ENST00000509637 NCOA2Q15596 1464 aa25.64■■□□□ 1.69
RAB40C-202ENST00000509637 ZNF335Q9H4Z2 1342 aaPredicted RBP25.63■■□□□ 1.69
RAB40C-202ENST00000509637 LOC105371045A0A1W2PR82 267 aa25.62■■□□□ 1.69
RAB40C-202ENST00000509637 FBXO31Q5XUX0 539 aaPredicted RBP25.62■■□□□ 1.69
RAB40C-202ENST00000509637 ZNF142P52746 1687 aaPredicted RBP25.61■■□□□ 1.69
RAB40C-202ENST00000509637 ILDR2Q71H61 639 aa25.61■■□□□ 1.69
RAB40C-202ENST00000509637 CEP170BQ9Y4F5 1589 aaPredicted RBP25.61■■□□□ 1.69
RAB40C-202ENST00000509637 PPP6R1Q9UPN7 881 aa25.6■■□□□ 1.69
RAB40C-202ENST00000509637 TCOF1Q13428 1488 aaKnown RBP25.6■■□□□ 1.69
RAB40C-202ENST00000509637 CAMSAP2Q08AD1 1489 aa25.59■■□□□ 1.69
RAB40C-202ENST00000509637 KIF3BO15066 747 aa25.58■■□□□ 1.69
RAB40C-202ENST00000509637 PLA2R1Q13018 1463 aa25.57■■□□□ 1.68
RAB40C-202ENST00000509637 CCDC141Q6ZP82 1450 aa25.55■■□□□ 1.68
RAB40C-202ENST00000509637 DNMT1P26358 1616 aaKnown RBP25.53■■□□□ 1.68
RAB40C-202ENST00000509637 PKD2Q13563 968 aa25.53■■□□□ 1.68
RAB40C-202ENST00000509637 KANK4Q5T7N3 995 aaPredicted RBP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms