RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 CASKIN1Q8WXD9 1431 aa24.92■■□□□ 1.58
TPM3-219ENST00000509409 MAGI2Q86UL8 1455 aa24.91■■□□□ 1.58
TPM3-219ENST00000509409 ZFYVE16Q7Z3T8 1539 aa24.91■■□□□ 1.58
TPM3-219ENST00000509409 KIF14Q15058 1648 aa24.9■■□□□ 1.58
TPM3-219ENST00000509409 BCORL1Q5H9F3 1711 aa24.9■■□□□ 1.58
TPM3-219ENST00000509409 ARHGAP5Q13017 1502 aa24.88■■□□□ 1.57
TPM3-219ENST00000509409 ZMYM4Q5VZL5 1548 aa24.88■■□□□ 1.57
TPM3-219ENST00000509409 AFAP1Q8N556 730 aa24.88■■□□□ 1.57
TPM3-219ENST00000509409 ILDR1Q86SU0 546 aaPredicted RBP24.87■■□□□ 1.57
TPM3-219ENST00000509409 CCDC18Q5T9S5 1454 aa24.86■■□□□ 1.57
TPM3-219ENST00000509409 MYO5CQ9NQX4 1742 aa24.86■■□□□ 1.57
TPM3-219ENST00000509409 MADDQ8WXG6 1647 aa24.85■■□□□ 1.57
TPM3-219ENST00000509409 PCF11O94913 1555 aaKnown RBP24.83■■□□□ 1.57
TPM3-219ENST00000509409 ATP10AO60312 1499 aa24.83■■□□□ 1.56
TPM3-219ENST00000509409 ZNF518AQ6AHZ1 1483 aa24.8■■□□□ 1.56
TPM3-219ENST00000509409 LRRIQ1Q96JM4 1722 aa24.8■■□□□ 1.56
TPM3-219ENST00000509409 FYCO1Q9BQS8 1478 aa24.78■■□□□ 1.56
TPM3-219ENST00000509409 ZNF777Q9ULD5 760 aaPredicted RBP24.78■■□□□ 1.56
TPM3-219ENST00000509409 C9orf84Q5VXU9 1444 aa24.78■■□□□ 1.56
TPM3-219ENST00000509409 RIMS1Q86UR5 1692 aaKnown RBP24.77■■□□□ 1.56
TPM3-219ENST00000509409 TRAPPC8Q9Y2L5 1435 aa24.7■■□□□ 1.55
TPM3-219ENST00000509409 SIGLEC1Q9BZZ2 1709 aa24.7■■□□□ 1.54
TPM3-219ENST00000509409 HSPA2P54652 639 aa24.7■■□□□ 1.54
TPM3-219ENST00000509409 CDC42BPBQ9Y5S2 1711 aa24.69■■□□□ 1.54
TPM3-219ENST00000509409 CEBPAP49715 358 aaPredicted RBP24.68■■□□□ 1.54
TPM3-219ENST00000509409 LMTK3Q96Q04 1460 aa24.67■■□□□ 1.54
TPM3-219ENST00000509409 CFDP1Q9UEE9 299 aaPredicted RBP24.67■■□□□ 1.54
TPM3-219ENST00000509409 KDM5CP41229 1560 aa24.67■■□□□ 1.54
TPM3-219ENST00000509409 MTUS2Q5JR59 1369 aa24.67■■□□□ 1.54
TPM3-219ENST00000509409 ARHGEF12Q9NZN5 1544 aa24.66■■□□□ 1.54
TPM3-219ENST00000509409 PREX2Q70Z35 1606 aa24.66■■□□□ 1.54
TPM3-219ENST00000509409 HNRNPMP52272 730 aaKnown RBP eCLIP24.66■■□□□ 1.547e-7■■■□□ 16.5
TPM3-219ENST00000509409 ESF1Q9H501 851 aaKnown RBP24.66■■□□□ 1.54
TPM3-219ENST00000509409 MLH3Q9UHC1 1453 aa24.65■■□□□ 1.54
TPM3-219ENST00000509409 CCNB3Q8WWL7 1395 aa24.64■■□□□ 1.53
TPM3-219ENST00000509409 ABCC1P33527 1531 aa24.63■■□□□ 1.53
TPM3-219ENST00000509409 GPATCH8Q9UKJ3 1502 aaKnown RBP24.62■■□□□ 1.53
TPM3-219ENST00000509409 FER1L4A9Z1Z3 1794 aa24.61■■□□□ 1.53
TPM3-219ENST00000509409 SPAG9O60271 1321 aaKnown RBP24.61■■□□□ 1.53
TPM3-219ENST00000509409 CEP162Q5TB80 1403 aa24.6■■□□□ 1.53
TPM3-219ENST00000509409 DIP2CQ9Y2E4 1556 aa24.59■■□□□ 1.53
TPM3-219ENST00000509409 CDC42BPAQ5VT25 1732 aa24.58■■□□□ 1.53
TPM3-219ENST00000509409 ITSN2Q9NZM3 1697 aa24.56■■□□□ 1.52
TPM3-219ENST00000509409 LOC105371045A0A1W2PR82 267 aa24.55■■□□□ 1.52
TPM3-219ENST00000509409 ABCA6Q8N139 1617 aa24.54■■□□□ 1.52
TPM3-219ENST00000509409 FBXO41Q8TF61 875 aa24.53■■□□□ 1.52
TPM3-219ENST00000509409 SYCP2Q9BX26 1530 aa24.52■■□□□ 1.52
TPM3-219ENST00000509409 SAMD9LQ8IVG5 1584 aa24.52■■□□□ 1.52
TPM3-219ENST00000509409 REREQ9P2R6 1566 aa24.52■■□□□ 1.52
TPM3-219ENST00000509409 KIAA1107Q9UPP5 1409 aa24.52■■□□□ 1.52
TPM3-219ENST00000509409 PLEKHH2Q8IVE3 1493 aa24.51■■□□□ 1.51
TPM3-219ENST00000509409 ZNF644Q9H582 1327 aaPredicted RBP24.5■■□□□ 1.51
TPM3-219ENST00000509409 AGLP35573 1532 aa24.5■■□□□ 1.51
TPM3-219ENST00000509409 KIDINS220Q9ULH0 1771 aa24.48■■□□□ 1.51
TPM3-219ENST00000509409 UHRF1BP1Q6BDS2 1440 aa24.45■■□□□ 1.51
TPM3-219ENST00000509409 EHBP1L1Q8N3D4 1523 aa24.45■■□□□ 1.5
TPM3-219ENST00000509409 GGT6Q6P531 493 aa24.43■■□□□ 1.5
TPM3-219ENST00000509409 CNTLNQ9NXG0 1405 aa24.43■■□□□ 1.5
TPM3-219ENST00000509409 DMRT2Q9Y5R5 561 aa24.42■■□□□ 1.5
TPM3-219ENST00000509409 ATP7AQ04656 1500 aa24.4■■□□□ 1.5
TPM3-219ENST00000509409 A2MP01023 1474 aa24.39■■□□□ 1.5
TPM3-219ENST00000509409 TIAM1Q13009 1591 aa24.39■■□□□ 1.5
TPM3-219ENST00000509409 PREX1Q8TCU6 1659 aa24.39■■□□□ 1.49
TPM3-219ENST00000509409 SETD1BQ9UPS6 1966 aaKnown RBP24.37■■□□□ 1.49
TPM3-219ENST00000509409 ZMYM3Q14202 1370 aa24.37■■□□□ 1.49
TPM3-219ENST00000509409 CERKQ8TCT0 537 aa24.36■■□□□ 1.49
TPM3-219ENST00000509409 NCOA2Q15596 1464 aa24.35■■□□□ 1.49
TPM3-219ENST00000509409 C3P01024 1663 aa24.34■■□□□ 1.49
TPM3-219ENST00000509409 MBD5Q9P267 1494 aa24.34■■□□□ 1.49
TPM3-219ENST00000509409 RSPH4AQ5TD94 716 aa24.34■■□□□ 1.49
TPM3-219ENST00000509409 SUPT6HQ7KZ85 1726 aaKnown RBP24.34■■□□□ 1.49
TPM3-219ENST00000509409 VPS8Q8N3P4 1428 aa24.33■■□□□ 1.49
TPM3-219ENST00000509409 INO80Q9ULG1 1556 aaPredicted RBP24.31■■□□□ 1.48
TPM3-219ENST00000509409 PPP6R1Q9UPN7 881 aa24.31■■□□□ 1.48
TPM3-219ENST00000509409 RTEL1-TNFRSF6BF6WH68 1400 aa24.3■■□□□ 1.48
TPM3-219ENST00000509409 TSPY4P0CV99 314 aa24.3■■□□□ 1.48
TPM3-219ENST00000509409 TSPY10P0CW01 314 aa24.3■■□□□ 1.48
TPM3-219ENST00000509409 DHX29Q7Z478 1369 aaKnown RBP24.29■■□□□ 1.48
TPM3-219ENST00000509409 KIF3BO15066 747 aa24.27■■□□□ 1.48
TPM3-219ENST00000509409 NPATQ14207 1427 aa24.27■■□□□ 1.48
TPM3-219ENST00000509409 KANK4Q5T7N3 995 aaPredicted RBP24.26■■□□□ 1.47
TPM3-219ENST00000509409 CAMSAP2Q08AD1 1489 aa24.26■■□□□ 1.47
TPM3-219ENST00000509409 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
TPM3-219ENST00000509409 PLXNC1O60486 1568 aa24.25■■□□□ 1.47
TPM3-219ENST00000509409 LRRC9Q6ZRR7 1453 aa24.25■■□□□ 1.47
TPM3-219ENST00000509409 APLP2Q06481 763 aa24.23■■□□□ 1.47
TPM3-219ENST00000509409 ADGBQ8N7X0 1667 aa24.21■■□□□ 1.47
TPM3-219ENST00000509409 STRCQ7RTU9 1775 aa24.21■■□□□ 1.47
TPM3-219ENST00000509409 MROH2AA6NES4 1674 aa24.21■■□□□ 1.47
TPM3-219ENST00000509409 CLTCQ00610 1675 aaKnown RBP24.21■■□□□ 1.47
TPM3-219ENST00000509409 PTPRTO14522 1441 aa24.2■■□□□ 1.46
TPM3-219ENST00000509409 PTPRKQ15262 1439 aa24.18■■□□□ 1.46
TPM3-219ENST00000509409 NCKAP5LQ9HCH0 1330 aa24.18■■□□□ 1.46
TPM3-219ENST00000509409 WASHC2CQ9Y4E1 1318 aa24.18■■□□□ 1.46
TPM3-219ENST00000509409 NCOA1Q15788 1441 aa24.17■■□□□ 1.46
TPM3-219ENST00000509409 MAP3K1Q13233 1512 aa24.14■■□□□ 1.45
TPM3-219ENST00000509409 CAMSAP1Q5T5Y3 1602 aa24.13■■□□□ 1.45
TPM3-219ENST00000509409 FBXO31Q5XUX0 539 aaPredicted RBP24.13■■□□□ 1.45
TPM3-219ENST00000509409 PKD2Q13563 968 aa24.12■■□□□ 1.45
TPM3-219ENST00000509409 ARHGEF5Q12774 1597 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms