RNA–Protein interactions for RNA: ENST00000509234.1

TRAPPC13-210, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-210ENST00000509234 IER5LQ5T953 404 aa10.24□□□□□ -0.77
TRAPPC13-210ENST00000509234 PLCG2P16885 1265 aa10.16□□□□□ -0.78
TRAPPC13-210ENST00000509234 TMEM121BQ9BXQ6 578 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC13-210ENST00000509234 MARVELD3Q96A59 401 aa10.14□□□□□ -0.79
TRAPPC13-210ENST00000509234 SNPHO15079 494 aa10.13□□□□□ -0.79
TRAPPC13-210ENST00000509234 MKRN3Q13064 507 aaKnown RBP10.13□□□□□ -0.79
TRAPPC13-210ENST00000509234 GOLGA2Q08379 1002 aa10.1□□□□□ -0.79
TRAPPC13-210ENST00000509234 NCKAP5LQ9HCH0 1330 aa10.09□□□□□ -0.79
TRAPPC13-210ENST00000509234 PDCD7Q8N8D1 485 aaKnown RBP10.09□□□□□ -0.79
TRAPPC13-210ENST00000509234 IRX5P78411 483 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC13-210ENST00000509234 CRISPLD2Q9H0B8 497 aa10.08□□□□□ -0.8
TRAPPC13-210ENST00000509234 MFSD10Q14728 455 aa10.07□□□□□ -0.8
TRAPPC13-210ENST00000509234 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.06□□□□□ -0.8
TRAPPC13-210ENST00000509234 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.06□□□□□ -0.8
TRAPPC13-210ENST00000509234 P3H3Q8IVL6 736 aa10.05□□□□□ -0.8
TRAPPC13-210ENST00000509234 KCNV2Q8TDN2 545 aa10.05□□□□□ -0.8
TRAPPC13-210ENST00000509234 OCEL1Q9H607 264 aa10.04□□□□□ -0.8
TRAPPC13-210ENST00000509234 DPY19L2Q6NUT2 758 aa10.02□□□□□ -0.81
TRAPPC13-210ENST00000509234 NISCHQ9Y2I1 1504 aa10.02□□□□□ -0.81
TRAPPC13-210ENST00000509234 NBR1Q14596 966 aa10□□□□□ -0.81
TRAPPC13-210ENST00000509234 PDE4AP27815 886 aa9.99□□□□□ -0.81
TRAPPC13-210ENST00000509234 EMP3P54852 163 aa9.99□□□□□ -0.81
TRAPPC13-210ENST00000509234 WDR70Q9NW82 654 aa9.99□□□□□ -0.81
TRAPPC13-210ENST00000509234 CAMK2BQ13554 666 aa9.98□□□□□ -0.81
TRAPPC13-210ENST00000509234 MICALL2Q8IY33 904 aa9.98□□□□□ -0.81
TRAPPC13-210ENST00000509234 E2F4Q16254 413 aa9.97□□□□□ -0.81
TRAPPC13-210ENST00000509234 ARIH1Q9Y4X5 557 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC13-210ENST00000509234 ARHGEF1Q92888 912 aaKnown RBP9.96□□□□□ -0.82
TRAPPC13-210ENST00000509234 LARP6Q9BRS8 491 aaKnown RBP9.96□□□□□ -0.82
TRAPPC13-210ENST00000509234 GPHNQ9NQX3 736 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC13-210ENST00000509234 FAM205CA6NFA0 338 aa9.94□□□□□ -0.82
TRAPPC13-210ENST00000509234 PRKCSHP14314 528 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC13-210ENST00000509234 DDX27Q96GQ7 796 aaKnown RBP9.93□□□□□ -0.82
TRAPPC13-210ENST00000509234 HS3ST6Q96QI5 342 aa9.93□□□□□ -0.82
TRAPPC13-210ENST00000509234 KRTAP3-3Q9BYR6 98 aa9.93□□□□□ -0.82
TRAPPC13-210ENST00000509234 KRTAP3-2Q9BYR7 98 aa9.93□□□□□ -0.82
TRAPPC13-210ENST00000509234 POTEB3A0JP26 581 aa9.92□□□□□ -0.82
TRAPPC13-210ENST00000509234 KIF3CO14782 793 aa9.92□□□□□ -0.82
TRAPPC13-210ENST00000509234 POTEBQ6S5H4 581 aa9.92□□□□□ -0.82
TRAPPC13-210ENST00000509234 BOLA1Q9Y3E2 137 aa9.91□□□□□ -0.82
TRAPPC13-210ENST00000509234 TPRNQ4KMQ1 711 aa9.9□□□□□ -0.82
TRAPPC13-210ENST00000509234 FOXK1P85037 733 aa9.88□□□□□ -0.83
TRAPPC13-210ENST00000509234 PPP1R15BQ5SWA1 713 aa9.88□□□□□ -0.83
TRAPPC13-210ENST00000509234 C3orf67Q6ZVT6 689 aa9.88□□□□□ -0.83
TRAPPC13-210ENST00000509234 DSG2Q14126 1118 aa9.86□□□□□ -0.83
TRAPPC13-210ENST00000509234 TMEM92Q6UXU6 159 aa9.85□□□□□ -0.83
TRAPPC13-210ENST00000509234 L3MBTL3Q96JM7 780 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC13-210ENST00000509234 TESPA1A2RU30 521 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC13-210ENST00000509234 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.83□□□□□ -0.84
TRAPPC13-210ENST00000509234 EMILIN3Q9NT22 766 aa9.83□□□□□ -0.84
TRAPPC13-210ENST00000509234 C2orf72A6NCS6 295 aa9.82□□□□□ -0.84
TRAPPC13-210ENST00000509234 SEMA3EO15041 775 aa9.8□□□□□ -0.84
TRAPPC13-210ENST00000509234 TMC2Q8TDI7 906 aa9.79□□□□□ -0.84
TRAPPC13-210ENST00000509234 LMOD2Q6P5Q4 547 aa9.77□□□□□ -0.85
TRAPPC13-210ENST00000509234 PLPP6Q8IY26 295 aa9.77□□□□□ -0.85
TRAPPC13-210ENST00000509234 PDIA6Q15084 440 aa9.76□□□□□ -0.85
TRAPPC13-210ENST00000509234 RNF166Q96A37 237 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC13-210ENST00000509234 G3V3G9 751 aa9.74□□□□□ -0.85
TRAPPC13-210ENST00000509234 DPYSL4O14531 572 aa9.72□□□□□ -0.85
TRAPPC13-210ENST00000509234 SPDYE16A6NNV3 312 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC13-210ENST00000509234 OXER1Q8TDS5 423 aa9.71□□□□□ -0.86
TRAPPC13-210ENST00000509234 ERBB3P21860 1342 aa9.71□□□□□ -0.86
TRAPPC13-210ENST00000509234 MLLT3P42568 568 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC13-210ENST00000509234 ZNF710Q8N1W2 664 aa9.69□□□□□ -0.86
TRAPPC13-210ENST00000509234 SLC34A2O95436 690 aa9.67□□□□□ -0.86
TRAPPC13-210ENST00000509234 MYT1LQ9UL68 1186 aa9.67□□□□□ -0.86
TRAPPC13-210ENST00000509234 HOXB3P14651 431 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC13-210ENST00000509234 HOXB1P14653 301 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC13-210ENST00000509234 PTCD2Q8WV60 388 aaKnown RBP9.66□□□□□ -0.86
TRAPPC13-210ENST00000509234 TULP1O00294 542 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC13-210ENST00000509234 SMYD5Q6GMV2 418 aa9.65□□□□□ -0.86
TRAPPC13-210ENST00000509234 ZC3H15Q8WU90 426 aaKnown RBP9.65□□□□□ -0.86
TRAPPC13-210ENST00000509234 PTGER2P43116 358 aa9.63□□□□□ -0.87
TRAPPC13-210ENST00000509234 ZMYND10O75800 440 aa9.6□□□□□ -0.87
TRAPPC13-210ENST00000509234 DOK7Q18PE1 504 aa9.6□□□□□ -0.87
TRAPPC13-210ENST00000509234 VARS2Q5ST30 1063 aaKnown RBP9.6□□□□□ -0.87
TRAPPC13-210ENST00000509234 KDM4FA0A1W2PPD8 638 aa9.59□□□□□ -0.87
TRAPPC13-210ENST00000509234 MAP3K9P80192 1104 aa9.59□□□□□ -0.87
TRAPPC13-210ENST00000509234 RBM26Q5T8P6 1007 aaKnown RBP9.59□□□□□ -0.87
TRAPPC13-210ENST00000509234 UPF1Q92900 1129 aaKnown RBP eCLIP9.59□□□□□ -0.87
TRAPPC13-210ENST00000509234 ANO8Q9HCE9 1232 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC13-210ENST00000509234 GPR37O15354 613 aa9.58□□□□□ -0.88
TRAPPC13-210ENST00000509234 OSBPP22059 807 aa9.56□□□□□ -0.88
TRAPPC13-210ENST00000509234 EVI5O60447 810 aa9.55□□□□□ -0.88
TRAPPC13-210ENST00000509234 BARGINQ6ZT62 677 aa9.55□□□□□ -0.88
TRAPPC13-210ENST00000509234 RIMBP2O15034 1052 aa9.54□□□□□ -0.88
TRAPPC13-210ENST00000509234 TBC1D12O60347 775 aa9.53□□□□□ -0.88
TRAPPC13-210ENST00000509234 PRIM1P49642 420 aaKnown RBP9.53□□□□□ -0.88
TRAPPC13-210ENST00000509234 ZNF687Q8N1G0 1237 aa9.53□□□□□ -0.88
TRAPPC13-210ENST00000509234 GPIHBP1Q8IV16 184 aa9.52□□□□□ -0.89
TRAPPC13-210ENST00000509234 PCDHGA4Q9Y5G9 962 aa9.52□□□□□ -0.89
TRAPPC13-210ENST00000509234 ANKRD13DQ6ZTN6 518 aa9.5□□□□□ -0.89
TRAPPC13-210ENST00000509234 GRXCR2A6NFK2 248 aa9.49□□□□□ -0.89
TRAPPC13-210ENST00000509234 SLC24A3Q9HC58 644 aa9.49□□□□□ -0.89
TRAPPC13-210ENST00000509234 DDX12PQ92771 950 aa9.48□□□□□ -0.89
TRAPPC13-210ENST00000509234 PHF14O94880 888 aa9.46□□□□□ -0.9
TRAPPC13-210ENST00000509234 GPR153Q6NV75 609 aa9.45□□□□□ -0.9
TRAPPC13-210ENST00000509234 ZSWIM6Q9HCJ5 1215 aa9.45□□□□□ -0.9
TRAPPC13-210ENST00000509234 BRPF1P55201 1214 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC13-210ENST00000509234 PCDHGA10Q9Y5H3 936 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms