RNA–Protein interactions for RNA: ENST00000509055.1

AP3S1-206, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-206ENST00000509055 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.82□□□□□ -1.32
AP3S1-206ENST00000509055 MMRN1Q13201 1228 aa6.8□□□□□ -1.32
AP3S1-206ENST00000509055 BOLA1Q9Y3E2 137 aa6.8□□□□□ -1.32
AP3S1-206ENST00000509055 NCKAP5LQ9HCH0 1330 aa6.78□□□□□ -1.32
AP3S1-206ENST00000509055 KIF3CO14782 793 aa6.77□□□□□ -1.33
AP3S1-206ENST00000509055 RYDENQ9NUL5 291 aaKnown RBP6.76□□□□□ -1.33
AP3S1-206ENST00000509055 KDM2AQ9Y2K7 1162 aa6.76□□□□□ -1.33
AP3S1-206ENST00000509055 CRISPLD2Q9H0B8 497 aa6.75□□□□□ -1.33
AP3S1-206ENST00000509055 SCUBE2Q9NQ36 999 aa6.75□□□□□ -1.33
AP3S1-206ENST00000509055 L3MBTL3Q96JM7 780 aaPredicted RBP6.74□□□□□ -1.33
AP3S1-206ENST00000509055 SPNS2Q8IVW8 549 aa6.72□□□□□ -1.33
AP3S1-206ENST00000509055 C2orf72A6NCS6 295 aa6.71□□□□□ -1.34
AP3S1-206ENST00000509055 HAP1P54257 671 aaPredicted RBP6.7□□□□□ -1.34
AP3S1-206ENST00000509055 GPHNQ9NQX3 736 aaPredicted RBP6.7□□□□□ -1.34
AP3S1-206ENST00000509055 MFSD10Q14728 455 aa6.69□□□□□ -1.34
AP3S1-206ENST00000509055 DSG2Q14126 1118 aa6.68□□□□□ -1.34
AP3S1-206ENST00000509055 HOXB3P14651 431 aaPredicted RBP6.66□□□□□ -1.34
AP3S1-206ENST00000509055 FOXK1P85037 733 aa6.66□□□□□ -1.34
AP3S1-206ENST00000509055 C3orf67Q6ZVT6 689 aa6.66□□□□□ -1.34
AP3S1-206ENST00000509055 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.66□□□□□ -1.34
AP3S1-206ENST00000509055 SLAIN1Q8ND83 568 aa6.65□□□□□ -1.34
AP3S1-206ENST00000509055 LARP6Q9BRS8 491 aaKnown RBP6.65□□□□□ -1.34
AP3S1-206ENST00000509055 SLC24A1O60721 1099 aa6.63□□□□□ -1.35
AP3S1-206ENST00000509055 PDE4AP27815 886 aa6.63□□□□□ -1.35
AP3S1-206ENST00000509055 CAMK2BQ13554 666 aa6.63□□□□□ -1.35
AP3S1-206ENST00000509055 G3V3G9 751 aa6.62□□□□□ -1.35
AP3S1-206ENST00000509055 PPP1R15BQ5SWA1 713 aa6.62□□□□□ -1.35
AP3S1-206ENST00000509055 PLPP6Q8IY26 295 aa6.62□□□□□ -1.35
AP3S1-206ENST00000509055 VSIG10Q8N0Z9 540 aa6.62□□□□□ -1.35
AP3S1-206ENST00000509055 EMILIN3Q9NT22 766 aa6.62□□□□□ -1.35
AP3S1-206ENST00000509055 TMC2Q8TDI7 906 aa6.61□□□□□ -1.35
AP3S1-206ENST00000509055 DDX27Q96GQ7 796 aaKnown RBP6.61□□□□□ -1.35
AP3S1-206ENST00000509055 KDM4FA0A1W2PPD8 638 aa6.6□□□□□ -1.35
AP3S1-206ENST00000509055 KCNV2Q8TDN2 545 aa6.58□□□□□ -1.36
AP3S1-206ENST00000509055 SLC34A2O95436 690 aa6.57□□□□□ -1.36
AP3S1-206ENST00000509055 OXER1Q8TDS5 423 aa6.57□□□□□ -1.36
AP3S1-206ENST00000509055 GPR153Q6NV75 609 aa6.56□□□□□ -1.36
AP3S1-206ENST00000509055 PTCD2Q8WV60 388 aaKnown RBP6.56□□□□□ -1.36
AP3S1-206ENST00000509055 KHSRPQ92945 711 aaKnown RBP eCLIP6.56□□□□□ -1.36
AP3S1-206ENST00000509055 ST18O60284 1047 aa6.55□□□□□ -1.36
AP3S1-206ENST00000509055 ARIH1Q9Y4X5 557 aaPredicted RBP6.55□□□□□ -1.36
AP3S1-206ENST00000509055 E2F4Q16254 413 aa6.54□□□□□ -1.36
AP3S1-206ENST00000509055 PCDHGA4Q9Y5G9 962 aa6.52□□□□□ -1.37
AP3S1-206ENST00000509055 ARSIQ5FYB1 569 aa6.51□□□□□ -1.37
AP3S1-206ENST00000509055 UPF1Q92900 1129 aaKnown RBP eCLIP6.51□□□□□ -1.37
AP3S1-206ENST00000509055 POTEB3A0JP26 581 aa6.5□□□□□ -1.37
AP3S1-206ENST00000509055 DPYSL4O14531 572 aa6.5□□□□□ -1.37
AP3S1-206ENST00000509055 POTEBQ6S5H4 581 aa6.5□□□□□ -1.37
AP3S1-206ENST00000509055 WDR70Q9NW82 654 aa6.5□□□□□ -1.37
AP3S1-206ENST00000509055 HOXB1P14653 301 aaPredicted RBP6.49□□□□□ -1.37
AP3S1-206ENST00000509055 DOK7Q18PE1 504 aa6.49□□□□□ -1.37
AP3S1-206ENST00000509055 ANO8Q9HCE9 1232 aaPredicted RBP6.49□□□□□ -1.37
AP3S1-206ENST00000509055 ARHGEF1Q92888 912 aaKnown RBP6.48□□□□□ -1.37
AP3S1-206ENST00000509055 NUDT7P0C024 238 aa6.47□□□□□ -1.37
AP3S1-206ENST00000509055 PDIA6Q15084 440 aa6.47□□□□□ -1.37
AP3S1-206ENST00000509055 ZSWIM6Q9HCJ5 1215 aa6.47□□□□□ -1.37
AP3S1-206ENST00000509055 SNPHO15079 494 aa6.46□□□□□ -1.38
AP3S1-206ENST00000509055 PRIM1P49642 420 aaKnown RBP6.46□□□□□ -1.38
AP3S1-206ENST00000509055 MARVELD3Q96A59 401 aa6.46□□□□□ -1.38
AP3S1-206ENST00000509055 EVI5O60447 810 aa6.45□□□□□ -1.38
AP3S1-206ENST00000509055 SEMA3EO15041 775 aa6.44□□□□□ -1.38
AP3S1-206ENST00000509055 MLLT3P42568 568 aaPredicted RBP6.44□□□□□ -1.38
AP3S1-206ENST00000509055 LHX6Q9UPM6 363 aa6.44□□□□□ -1.38
AP3S1-206ENST00000509055 PTGER2P43116 358 aa6.43□□□□□ -1.38
AP3S1-206ENST00000509055 MAP3K9P80192 1104 aa6.43□□□□□ -1.38
AP3S1-206ENST00000509055 P3H3Q8IVL6 736 aa6.43□□□□□ -1.38
AP3S1-206ENST00000509055 POTEEQ6S8J3 1075 aa6.42□□□□□ -1.38
AP3S1-206ENST00000509055 ZNF710Q8N1W2 664 aa6.42□□□□□ -1.38
AP3S1-206ENST00000509055 TESPA1A2RU30 521 aaPredicted RBP6.41□□□□□ -1.38
AP3S1-206ENST00000509055 SPDYE16A6NNV3 312 aaPredicted RBP6.4□□□□□ -1.38
AP3S1-206ENST00000509055 RIMBP2O15034 1052 aa6.4□□□□□ -1.38
AP3S1-206ENST00000509055 PCDHGA10Q9Y5H3 936 aa6.4□□□□□ -1.38
AP3S1-206ENST00000509055 ZNF316A6NFI3 1004 aaPredicted RBP6.39□□□□□ -1.39
AP3S1-206ENST00000509055 TBC1D12O60347 775 aa6.39□□□□□ -1.39
AP3S1-206ENST00000509055 OSBPP22059 807 aa6.39□□□□□ -1.39
AP3S1-206ENST00000509055 FOSBP53539 338 aa6.39□□□□□ -1.39
AP3S1-206ENST00000509055 DDX12PQ92771 950 aa6.38□□□□□ -1.39
AP3S1-206ENST00000509055 HS3ST6Q96QI5 342 aa6.37□□□□□ -1.39
AP3S1-206ENST00000509055 FAM205CA6NFA0 338 aa6.36□□□□□ -1.39
AP3S1-206ENST00000509055 EMP3P54852 163 aa6.36□□□□□ -1.39
AP3S1-206ENST00000509055 VARS2Q5ST30 1063 aaKnown RBP6.36□□□□□ -1.39
AP3S1-206ENST00000509055 JPH4Q96JJ6 628 aa6.36□□□□□ -1.39
AP3S1-206ENST00000509055 PHF14O94880 888 aa6.35□□□□□ -1.39
AP3S1-206ENST00000509055 KRTAP3-3Q9BYR6 98 aa6.35□□□□□ -1.39
AP3S1-206ENST00000509055 KRTAP3-2Q9BYR7 98 aa6.35□□□□□ -1.39
AP3S1-206ENST00000509055 ADAM33Q9BZ11 813 aa6.35□□□□□ -1.39
AP3S1-206ENST00000509055 GRXCR2A6NFK2 248 aa6.34□□□□□ -1.39
AP3S1-206ENST00000509055 ERBB3P21860 1342 aa6.33□□□□□ -1.4
AP3S1-206ENST00000509055 GPR37O15354 613 aa6.33□□□□□ -1.4
AP3S1-206ENST00000509055 ZNF454Q8N9F8 522 aa6.33□□□□□ -1.4
AP3S1-206ENST00000509055 TSR1Q2NL82 804 aaKnown RBP6.32□□□□□ -1.4
AP3S1-206ENST00000509055 RBM26Q5T8P6 1007 aaKnown RBP6.32□□□□□ -1.4
AP3S1-206ENST00000509055 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.32□□□□□ -1.4
AP3S1-206ENST00000509055 ZNF687Q8N1G0 1237 aa6.32□□□□□ -1.4
AP3S1-206ENST00000509055 NPDC1Q9NQX5 325 aaPredicted RBP6.32□□□□□ -1.4
AP3S1-206ENST00000509055 COL9A1P20849 921 aa6.31□□□□□ -1.4
AP3S1-206ENST00000509055 EN1Q05925 392 aaPredicted RBP6.31□□□□□ -1.4
AP3S1-206ENST00000509055 NBR1Q14596 966 aa6.31□□□□□ -1.4
AP3S1-206ENST00000509055 ZDHHC16Q969W1 377 aa6.31□□□□□ -1.4
AP3S1-206ENST00000509055 BCL2L12Q9HB09 334 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms