RNA–Protein interactions for RNA: ENST00000508948.5

ARRDC3-205, Transcript of arrestin domain containing 3, humanhuman

TSL 4

Gene ARRDC3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3-205ENST00000508948 CDC42BPAQ5VT25 1732 aa13.33□□□□□ -0.28
ARRDC3-205ENST00000508948 PHLDB1Q86UU1 1377 aa13.32□□□□□ -0.28
ARRDC3-205ENST00000508948 CCNB3Q8WWL7 1395 aa13.32□□□□□ -0.28
ARRDC3-205ENST00000508948 APLP2Q06481 763 aa13.31□□□□□ -0.28
ARRDC3-205ENST00000508948 PREX2Q70Z35 1606 aa13.31□□□□□ -0.28
ARRDC3-205ENST00000508948 SCAPERQ9BY12 1400 aa13.3□□□□□ -0.28
ARRDC3-205ENST00000508948 NCOA2Q15596 1464 aa13.3□□□□□ -0.28
ARRDC3-205ENST00000508948 FRMPD1Q5SYB0 1578 aa13.3□□□□□ -0.28
ARRDC3-205ENST00000508948 CFAP74Q9C0B2 1584 aa13.3□□□□□ -0.28
ARRDC3-205ENST00000508948 ZNF777Q9ULD5 760 aaPredicted RBP13.3□□□□□ -0.28
ARRDC3-205ENST00000508948 ADGRL1O94910 1474 aa13.29□□□□□ -0.28
ARRDC3-205ENST00000508948 DENND4BO75064 1496 aaPredicted RBP13.29□□□□□ -0.28
ARRDC3-205ENST00000508948 SUPT6HQ7KZ85 1726 aaKnown RBP13.28□□□□□ -0.28
ARRDC3-205ENST00000508948 CFDP1Q9UEE9 299 aaPredicted RBP13.28□□□□□ -0.28
ARRDC3-205ENST00000508948 ARHGEF12Q9NZN5 1544 aa13.28□□□□□ -0.28
ARRDC3-205ENST00000508948 ZNF644Q9H582 1327 aaPredicted RBP13.27□□□□□ -0.29
ARRDC3-205ENST00000508948 RICTORQ6R327 1708 aa13.26□□□□□ -0.29
ARRDC3-205ENST00000508948 PPARGC1BQ86YN6 1023 aaKnown RBP13.26□□□□□ -0.29
ARRDC3-205ENST00000508948 SAMD9LQ8IVG5 1584 aa13.26□□□□□ -0.29
ARRDC3-205ENST00000508948 HNRNPMP52272 730 aaKnown RBP eCLIP13.25□□□□□ -0.29
ARRDC3-205ENST00000508948 AFAP1Q8N556 730 aa13.25□□□□□ -0.29
ARRDC3-205ENST00000508948 POGZQ7Z3K3 1410 aa13.24□□□□□ -0.29
ARRDC3-205ENST00000508948 TRAPPC8Q9Y2L5 1435 aa13.24□□□□□ -0.29
ARRDC3-205ENST00000508948 ABCC1P33527 1531 aa13.23□□□□□ -0.29
ARRDC3-205ENST00000508948 ITSN2Q9NZM3 1697 aa13.22□□□□□ -0.29
ARRDC3-205ENST00000508948 SYCP2Q9BX26 1530 aa13.21□□□□□ -0.29
ARRDC3-205ENST00000508948 YEATS2Q9ULM3 1422 aa13.21□□□□□ -0.3
ARRDC3-205ENST00000508948 ZMYM4Q5VZL5 1548 aa13.19□□□□□ -0.3
ARRDC3-205ENST00000508948 MYOM3Q5VTT5 1437 aa13.19□□□□□ -0.3
ARRDC3-205ENST00000508948 CAMSAP2Q08AD1 1489 aa13.18□□□□□ -0.3
ARRDC3-205ENST00000508948 ZNF518AQ6AHZ1 1483 aa13.18□□□□□ -0.3
ARRDC3-205ENST00000508948 MYT1LQ9UL68 1186 aa13.18□□□□□ -0.3
ARRDC3-205ENST00000508948 KIAA1107Q9UPP5 1409 aa13.18□□□□□ -0.3
ARRDC3-205ENST00000508948 MBD5Q9P267 1494 aa13.17□□□□□ -0.3
ARRDC3-205ENST00000508948 KDM5CP41229 1560 aa13.17□□□□□ -0.3
ARRDC3-205ENST00000508948 KDM4FA0A1W2PPD8 638 aa13.17□□□□□ -0.3
ARRDC3-205ENST00000508948 ZFYVE16Q7Z3T8 1539 aa13.17□□□□□ -0.3
ARRDC3-205ENST00000508948 PLEKHH2Q8IVE3 1493 aa13.16□□□□□ -0.3
ARRDC3-205ENST00000508948 ARHGEF40Q8TER5 1519 aa13.16□□□□□ -0.3
ARRDC3-205ENST00000508948 AEBP2Q6ZN18 517 aaPredicted RBP13.15□□□□□ -0.3
ARRDC3-205ENST00000508948 SIGLEC1Q9BZZ2 1709 aa13.15□□□□□ -0.3
ARRDC3-205ENST00000508948 MAGI2Q86UL8 1455 aa13.15□□□□□ -0.3
ARRDC3-205ENST00000508948 MIA2Q96PC5 1412 aa13.14□□□□□ -0.31
ARRDC3-205ENST00000508948 MLH3Q9UHC1 1453 aa13.14□□□□□ -0.31
ARRDC3-205ENST00000508948 HECW2Q9P2P5 1572 aa13.14□□□□□ -0.31
ARRDC3-205ENST00000508948 SPAG9O60271 1321 aaKnown RBP13.13□□□□□ -0.31
ARRDC3-205ENST00000508948 KIDINS220Q9ULH0 1771 aa13.13□□□□□ -0.31
ARRDC3-205ENST00000508948 ABCA6Q8N139 1617 aa13.13□□□□□ -0.31
ARRDC3-205ENST00000508948 FGD6Q6ZV73 1430 aa13.13□□□□□ -0.31
ARRDC3-205ENST00000508948 ARID4BQ4LE39 1312 aaPredicted RBP13.13□□□□□ -0.31
ARRDC3-205ENST00000508948 DIP2CQ9Y2E4 1556 aa13.12□□□□□ -0.31
ARRDC3-205ENST00000508948 ATP10AO60312 1499 aa13.12□□□□□ -0.31
ARRDC3-205ENST00000508948 PTPN23Q9H3S7 1636 aa13.12□□□□□ -0.31
ARRDC3-205ENST00000508948 CCDC141Q6ZP82 1450 aa13.1□□□□□ -0.31
ARRDC3-205ENST00000508948 ATP7AQ04656 1500 aa13.09□□□□□ -0.31
ARRDC3-205ENST00000508948 ARHGEF5Q12774 1597 aa13.09□□□□□ -0.31
ARRDC3-205ENST00000508948 MLECQ14165 292 aa13.09□□□□□ -0.31
ARRDC3-205ENST00000508948 C9orf84Q5VXU9 1444 aa13.09□□□□□ -0.31
ARRDC3-205ENST00000508948 INO80Q9ULG1 1556 aaPredicted RBP13.09□□□□□ -0.31
ARRDC3-205ENST00000508948 TCOF1Q13428 1488 aaKnown RBP13.09□□□□□ -0.31
ARRDC3-205ENST00000508948 FAM50AQ14320 339 aaKnown RBP13.07□□□□□ -0.32
ARRDC3-205ENST00000508948 RSPH4AQ5TD94 716 aa13.07□□□□□ -0.32
ARRDC3-205ENST00000508948 ABCC5O15440 1437 aa13.06□□□□□ -0.32
ARRDC3-205ENST00000508948 BCORL1Q5H9F3 1711 aa13.06□□□□□ -0.32
ARRDC3-205ENST00000508948 TSPY4P0CV99 314 aa13.06□□□□□ -0.32
ARRDC3-205ENST00000508948 TSPY10P0CW01 314 aa13.06□□□□□ -0.32
ARRDC3-205ENST00000508948 RTEL1-TNFRSF6BF6WH68 1400 aa13.05□□□□□ -0.32
ARRDC3-205ENST00000508948 CHIC2Q9UKJ5 165 aa13.04□□□□□ -0.32
ARRDC3-205ENST00000508948 ADAMTSL3P82987 1691 aa13.04□□□□□ -0.32
ARRDC3-205ENST00000508948 DAPK1P53355 1430 aa13.04□□□□□ -0.32
ARRDC3-205ENST00000508948 A2MP01023 1474 aa13.04□□□□□ -0.32
ARRDC3-205ENST00000508948 REREQ9P2R6 1566 aa13.03□□□□□ -0.32
ARRDC3-205ENST00000508948 MAST1Q9Y2H9 1570 aa13.03□□□□□ -0.32
ARRDC3-205ENST00000508948 DNMT1P26358 1616 aaKnown RBP13.02□□□□□ -0.32
ARRDC3-205ENST00000508948 ADGBQ8N7X0 1667 aa13.02□□□□□ -0.32
ARRDC3-205ENST00000508948 MADDQ8WXG6 1647 aa13.02□□□□□ -0.33
ARRDC3-205ENST00000508948 DHX29Q7Z478 1369 aaKnown RBP13.01□□□□□ -0.33
ARRDC3-205ENST00000508948 AGLP35573 1532 aa13.01□□□□□ -0.33
ARRDC3-205ENST00000508948 CROCC2H7BZ55 1655 aa13.01□□□□□ -0.33
ARRDC3-205ENST00000508948 PLXNC1O60486 1568 aa13□□□□□ -0.33
ARRDC3-205ENST00000508948 PTPRKQ15262 1439 aa13□□□□□ -0.33
ARRDC3-205ENST00000508948 RRP7BPQ9NSQ0 103 aa13□□□□□ -0.33
ARRDC3-205ENST00000508948 ITGAEP38570 1179 aa12.99□□□□□ -0.33
ARRDC3-205ENST00000508948 PLPPR3Q6T4P5 718 aa12.99□□□□□ -0.33
ARRDC3-205ENST00000508948 RIMS1Q86UR5 1692 aaKnown RBP12.99□□□□□ -0.33
ARRDC3-205ENST00000508948 SHANK2Q9UPX8 1470 aa12.98□□□□□ -0.33
ARRDC3-205ENST00000508948 RRBP1Q9P2E9 1410 aaKnown RBP12.97□□□□□ -0.33
ARRDC3-205ENST00000508948 KIF3BO15066 747 aa12.97□□□□□ -0.33
ARRDC3-205ENST00000508948 GGT6Q6P531 493 aa12.97□□□□□ -0.33
ARRDC3-205ENST00000508948 PTPRMP28827 1452 aa12.97□□□□□ -0.33
ARRDC3-205ENST00000508948 FER1L4A9Z1Z3 1794 aa12.96□□□□□ -0.34
ARRDC3-205ENST00000508948 KIF15Q9NS87 1388 aa12.95□□□□□ -0.34
ARRDC3-205ENST00000508948 CEBPAP49715 358 aaPredicted RBP12.95□□□□□ -0.34
ARRDC3-205ENST00000508948 NCOA1Q15788 1441 aa12.95□□□□□ -0.34
ARRDC3-205ENST00000508948 ANKRD30AQ9BXX3 1397 aa12.94□□□□□ -0.34
ARRDC3-205ENST00000508948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.94□□□□□ -0.34
ARRDC3-205ENST00000508948 ADGRL2O95490 1459 aa12.93□□□□□ -0.34
ARRDC3-205ENST00000508948 DUOX2Q9NRD8 1548 aa12.93□□□□□ -0.34
ARRDC3-205ENST00000508948 ESF1Q9H501 851 aaKnown RBP12.9□□□□□ -0.34
ARRDC3-205ENST00000508948 CLTCQ00610 1675 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms