RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 MYT1LQ9UL68 1186 aa16.27■□□□□ 0.2
UBE2D3-227ENST00000508818 KIF14Q15058 1648 aa16.27■□□□□ 0.19
UBE2D3-227ENST00000508818 RICTORQ6R327 1708 aa16.25■□□□□ 0.19
UBE2D3-227ENST00000508818 CCDC18Q5T9S5 1454 aa16.25■□□□□ 0.19
UBE2D3-227ENST00000508818 POGZQ7Z3K3 1410 aa16.25■□□□□ 0.19
UBE2D3-227ENST00000508818 MYO5CQ9NQX4 1742 aa16.25■□□□□ 0.19
UBE2D3-227ENST00000508818 ARHGAP5Q13017 1502 aa16.24■□□□□ 0.19
UBE2D3-227ENST00000508818 MAGI2Q86UL8 1455 aa16.23■□□□□ 0.19
UBE2D3-227ENST00000508818 ZFYVE16Q7Z3T8 1539 aa16.23■□□□□ 0.19
UBE2D3-227ENST00000508818 ARHGEF40Q8TER5 1519 aa16.23■□□□□ 0.19
UBE2D3-227ENST00000508818 PCF11O94913 1555 aaKnown RBP16.22■□□□□ 0.19
UBE2D3-227ENST00000508818 HECW2Q9P2P5 1572 aa16.22■□□□□ 0.19
UBE2D3-227ENST00000508818 PTPRMP28827 1452 aa16.22■□□□□ 0.19
UBE2D3-227ENST00000508818 ZMYM4Q5VZL5 1548 aa16.21■□□□□ 0.19
UBE2D3-227ENST00000508818 MLECQ14165 292 aa16.21■□□□□ 0.19
UBE2D3-227ENST00000508818 ADAMTSL3P82987 1691 aa16.21■□□□□ 0.18
UBE2D3-227ENST00000508818 YEATS2Q9ULM3 1422 aa16.2■□□□□ 0.18
UBE2D3-227ENST00000508818 FYCO1Q9BQS8 1478 aa16.2■□□□□ 0.18
UBE2D3-227ENST00000508818 BCORL1Q5H9F3 1711 aa16.19■□□□□ 0.18
UBE2D3-227ENST00000508818 LRRIQ1Q96JM4 1722 aa16.19■□□□□ 0.18
UBE2D3-227ENST00000508818 AFAP1Q8N556 730 aa16.19■□□□□ 0.18
UBE2D3-227ENST00000508818 ZNF777Q9ULD5 760 aaPredicted RBP16.17■□□□□ 0.18
UBE2D3-227ENST00000508818 ATP10AO60312 1499 aa16.16■□□□□ 0.18
UBE2D3-227ENST00000508818 ZNF518AQ6AHZ1 1483 aa16.16■□□□□ 0.18
UBE2D3-227ENST00000508818 MADDQ8WXG6 1647 aa16.16■□□□□ 0.18
UBE2D3-227ENST00000508818 C9orf84Q5VXU9 1444 aa16.13■□□□□ 0.17
UBE2D3-227ENST00000508818 MTUS2Q5JR59 1369 aa16.12■□□□□ 0.17
UBE2D3-227ENST00000508818 RIMS1Q86UR5 1692 aaKnown RBP16.11■□□□□ 0.17
UBE2D3-227ENST00000508818 CDC42BPBQ9Y5S2 1711 aa16.11■□□□□ 0.17
UBE2D3-227ENST00000508818 CFDP1Q9UEE9 299 aaPredicted RBP16.11■□□□□ 0.17
UBE2D3-227ENST00000508818 PREX2Q70Z35 1606 aa16.1■□□□□ 0.17
UBE2D3-227ENST00000508818 CCNB3Q8WWL7 1395 aa16.1■□□□□ 0.17
UBE2D3-227ENST00000508818 CEP162Q5TB80 1403 aa16.1■□□□□ 0.17
UBE2D3-227ENST00000508818 ESF1Q9H501 851 aaKnown RBP16.09■□□□□ 0.17
UBE2D3-227ENST00000508818 TRAPPC8Q9Y2L5 1435 aa16.08■□□□□ 0.16
UBE2D3-227ENST00000508818 HNRNPMP52272 730 aaKnown RBP eCLIP16.07■□□□□ 0.164e-13■■■■■ 32.7
UBE2D3-227ENST00000508818 MLH3Q9UHC1 1453 aa16.07■□□□□ 0.16
UBE2D3-227ENST00000508818 KDM5CP41229 1560 aa16.07■□□□□ 0.16
UBE2D3-227ENST00000508818 ABCC1P33527 1531 aa16.06■□□□□ 0.16
UBE2D3-227ENST00000508818 GPATCH8Q9UKJ3 1502 aaKnown RBP16.06■□□□□ 0.16
UBE2D3-227ENST00000508818 LOC105371045A0A1W2PR82 267 aa16.06■□□□□ 0.16
UBE2D3-227ENST00000508818 CDC42BPAQ5VT25 1732 aa16.05■□□□□ 0.16
UBE2D3-227ENST00000508818 ARHGEF12Q9NZN5 1544 aa16.05■□□□□ 0.16
UBE2D3-227ENST00000508818 SPAG9O60271 1321 aaKnown RBP16.05■□□□□ 0.16
UBE2D3-227ENST00000508818 ILDR1Q86SU0 546 aaPredicted RBP16.05■□□□□ 0.16
UBE2D3-227ENST00000508818 SIGLEC1Q9BZZ2 1709 aa16.05■□□□□ 0.16
UBE2D3-227ENST00000508818 FER1L4A9Z1Z3 1794 aa16.04■□□□□ 0.16
UBE2D3-227ENST00000508818 ITSN2Q9NZM3 1697 aa16.03■□□□□ 0.16
UBE2D3-227ENST00000508818 CEBPAP49715 358 aaPredicted RBP16.03■□□□□ 0.16
UBE2D3-227ENST00000508818 DIP2CQ9Y2E4 1556 aa16.02■□□□□ 0.16
UBE2D3-227ENST00000508818 HSPA2P54652 639 aa16.02■□□□□ 0.16
UBE2D3-227ENST00000508818 PLEKHH2Q8IVE3 1493 aa16.02■□□□□ 0.15
UBE2D3-227ENST00000508818 LMTK3Q96Q04 1460 aa16.01■□□□□ 0.15
UBE2D3-227ENST00000508818 KIAA1107Q9UPP5 1409 aa16■□□□□ 0.15
UBE2D3-227ENST00000508818 SAMD9LQ8IVG5 1584 aa16■□□□□ 0.15
UBE2D3-227ENST00000508818 SYCP2Q9BX26 1530 aa15.99■□□□□ 0.15
UBE2D3-227ENST00000508818 ABCA6Q8N139 1617 aa15.99■□□□□ 0.15
UBE2D3-227ENST00000508818 EHBP1L1Q8N3D4 1523 aa15.99■□□□□ 0.15
UBE2D3-227ENST00000508818 REREQ9P2R6 1566 aa15.98■□□□□ 0.15
UBE2D3-227ENST00000508818 ZNF644Q9H582 1327 aaPredicted RBP15.96■□□□□ 0.15
UBE2D3-227ENST00000508818 KIDINS220Q9ULH0 1771 aa15.96■□□□□ 0.15
UBE2D3-227ENST00000508818 AGLP35573 1532 aa15.96■□□□□ 0.15
UBE2D3-227ENST00000508818 ATP7AQ04656 1500 aa15.92■□□□□ 0.14
UBE2D3-227ENST00000508818 VPS8Q8N3P4 1428 aa15.92■□□□□ 0.14
UBE2D3-227ENST00000508818 CNTLNQ9NXG0 1405 aa15.92■□□□□ 0.14
UBE2D3-227ENST00000508818 TIAM1Q13009 1591 aa15.92■□□□□ 0.14
UBE2D3-227ENST00000508818 APLP2Q06481 763 aa15.91■□□□□ 0.14
UBE2D3-227ENST00000508818 RSPH4AQ5TD94 716 aa15.91■□□□□ 0.14
UBE2D3-227ENST00000508818 GGT6Q6P531 493 aa15.91■□□□□ 0.14
UBE2D3-227ENST00000508818 UHRF1BP1Q6BDS2 1440 aa15.91■□□□□ 0.14
UBE2D3-227ENST00000508818 NCOA2Q15596 1464 aa15.91■□□□□ 0.14
UBE2D3-227ENST00000508818 SUPT6HQ7KZ85 1726 aaKnown RBP15.9■□□□□ 0.14
UBE2D3-227ENST00000508818 A2MP01023 1474 aa15.9■□□□□ 0.14
UBE2D3-227ENST00000508818 SETD1BQ9UPS6 1966 aaKnown RBP15.89■□□□□ 0.13
UBE2D3-227ENST00000508818 DMRT2Q9Y5R5 561 aa15.89■□□□□ 0.13
UBE2D3-227ENST00000508818 PREX1Q8TCU6 1659 aa15.89■□□□□ 0.13
UBE2D3-227ENST00000508818 TSPY4P0CV99 314 aa15.88■□□□□ 0.13
UBE2D3-227ENST00000508818 TSPY10P0CW01 314 aa15.88■□□□□ 0.13
UBE2D3-227ENST00000508818 FBXO41Q8TF61 875 aa15.88■□□□□ 0.13
UBE2D3-227ENST00000508818 MBD5Q9P267 1494 aa15.86■□□□□ 0.13
UBE2D3-227ENST00000508818 INO80Q9ULG1 1556 aaPredicted RBP15.86■□□□□ 0.13
UBE2D3-227ENST00000508818 ZMYM3Q14202 1370 aa15.86■□□□□ 0.13
UBE2D3-227ENST00000508818 RTEL1-TNFRSF6BF6WH68 1400 aa15.85■□□□□ 0.13
UBE2D3-227ENST00000508818 LRRC9Q6ZRR7 1453 aa15.85■□□□□ 0.13
UBE2D3-227ENST00000508818 C3P01024 1663 aa15.85■□□□□ 0.13
UBE2D3-227ENST00000508818 CAMSAP2Q08AD1 1489 aa15.84■□□□□ 0.13
UBE2D3-227ENST00000508818 KIF3BO15066 747 aa15.83■□□□□ 0.12
UBE2D3-227ENST00000508818 KANK4Q5T7N3 995 aaPredicted RBP15.83■□□□□ 0.12
UBE2D3-227ENST00000508818 SCAF1Q9H7N4 1312 aaKnown RBP15.83■□□□□ 0.12
UBE2D3-227ENST00000508818 DHX29Q7Z478 1369 aaKnown RBP15.83■□□□□ 0.12
UBE2D3-227ENST00000508818 CCDC141Q6ZP82 1450 aa15.83■□□□□ 0.12
UBE2D3-227ENST00000508818 ADGBQ8N7X0 1667 aa15.83■□□□□ 0.12
UBE2D3-227ENST00000508818 PLXNC1O60486 1568 aa15.8■□□□□ 0.12
UBE2D3-227ENST00000508818 MAP3K1Q13233 1512 aa15.8■□□□□ 0.12
UBE2D3-227ENST00000508818 NPATQ14207 1427 aa15.8■□□□□ 0.12
UBE2D3-227ENST00000508818 CERKQ8TCT0 537 aa15.8■□□□□ 0.12
UBE2D3-227ENST00000508818 MROH2AA6NES4 1674 aa15.79■□□□□ 0.12
UBE2D3-227ENST00000508818 CLTCQ00610 1675 aaKnown RBP15.78■□□□□ 0.12
UBE2D3-227ENST00000508818 WASHC2CQ9Y4E1 1318 aa15.77■□□□□ 0.12
UBE2D3-227ENST00000508818 ARHGEF5Q12774 1597 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms