RNA–Protein interactions for RNA: ENST00000508584.1

NFKB1-207, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 3

Gene NFKB1, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-207ENST00000508584 FAM50AQ14320 339 aaKnown RBP24.28■■□□□ 1.48
NFKB1-207ENST00000508584 ADGRL1O94910 1474 aa24.27■■□□□ 1.48
NFKB1-207ENST00000508584 MIA2Q96PC5 1412 aa24.26■■□□□ 1.47
NFKB1-207ENST00000508584 TCOF1Q13428 1488 aaKnown RBP24.21■■□□□ 1.47
NFKB1-207ENST00000508584 PTPN23Q9H3S7 1636 aa24.21■■□□□ 1.47
NFKB1-207ENST00000508584 GPATCH8Q9UKJ3 1502 aaKnown RBP24.2■■□□□ 1.47
NFKB1-207ENST00000508584 ITGAEP38570 1179 aa24.18■■□□□ 1.46
NFKB1-207ENST00000508584 ITSN2Q9NZM3 1697 aa24.17■■□□□ 1.46
NFKB1-207ENST00000508584 CFDP1Q9UEE9 299 aaPredicted RBP24.15■■□□□ 1.46
NFKB1-207ENST00000508584 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.13■■□□□ 1.45
NFKB1-207ENST00000508584 ARAP3Q8WWN8 1544 aa24.11■■□□□ 1.45
NFKB1-207ENST00000508584 ABCA9Q8IUA7 1624 aa24.1■■□□□ 1.45
NFKB1-207ENST00000508584 TTC37Q6PGP7 1564 aa24.1■■□□□ 1.45
NFKB1-207ENST00000508584 CDC42BPAQ5VT25 1732 aa24.09■■□□□ 1.45
NFKB1-207ENST00000508584 CAMSAP2Q08AD1 1489 aa24.07■■□□□ 1.44
NFKB1-207ENST00000508584 ZNF644Q9H582 1327 aaPredicted RBP24.07■■□□□ 1.44
NFKB1-207ENST00000508584 PREX2Q70Z35 1606 aa24.06■■□□□ 1.44
NFKB1-207ENST00000508584 ZNF777Q9ULD5 760 aaPredicted RBP24.05■■□□□ 1.44
NFKB1-207ENST00000508584 PTPRKQ15262 1439 aa24.03■■□□□ 1.44
NFKB1-207ENST00000508584 NEO1Q92859 1461 aa24.02■■□□□ 1.44
NFKB1-207ENST00000508584 PLCH2O75038 1416 aa24.01■■□□□ 1.43
NFKB1-207ENST00000508584 ARHGAP5Q13017 1502 aa24■■□□□ 1.43
NFKB1-207ENST00000508584 MYO5CQ9NQX4 1742 aa24■■□□□ 1.43
NFKB1-207ENST00000508584 RAPGEF3O95398 923 aa23.99■■□□□ 1.43
NFKB1-207ENST00000508584 DAPK1P53355 1430 aa23.99■■□□□ 1.43
NFKB1-207ENST00000508584 CDC42BPBQ9Y5S2 1711 aa23.98■■□□□ 1.43
NFKB1-207ENST00000508584 ABCC5O15440 1437 aa23.98■■□□□ 1.43
NFKB1-207ENST00000508584 DNMT1P26358 1616 aaKnown RBP23.98■■□□□ 1.43
NFKB1-207ENST00000508584 SETD5Q9C0A6 1442 aa23.96■■□□□ 1.43
NFKB1-207ENST00000508584 SAMD9LQ8IVG5 1584 aa23.95■■□□□ 1.42
NFKB1-207ENST00000508584 EFCAB2Q5VUJ9 269 aa23.94■■□□□ 1.42
NFKB1-207ENST00000508584 PLEKHH2Q8IVE3 1493 aa23.93■■□□□ 1.42
NFKB1-207ENST00000508584 HFM1A2PYH4 1435 aa23.92■■□□□ 1.42
NFKB1-207ENST00000508584 HECW2Q9P2P5 1572 aa23.91■■□□□ 1.42
NFKB1-207ENST00000508584 CHIC2Q9UKJ5 165 aa23.91■■□□□ 1.42
NFKB1-207ENST00000508584 RAB3GAP2Q9H2M9 1393 aa23.91■■□□□ 1.42
NFKB1-207ENST00000508584 CCER1Q8TC90 406 aaPredicted RBP23.9■■□□□ 1.42
NFKB1-207ENST00000508584 AKNAQ7Z591 1439 aa23.9■■□□□ 1.42
NFKB1-207ENST00000508584 ARHGEF5Q12774 1597 aa23.9■■□□□ 1.42
NFKB1-207ENST00000508584 KIAA1107Q9UPP5 1409 aa23.89■■□□□ 1.41
NFKB1-207ENST00000508584 ROCK1Q13464 1354 aa23.89■■□□□ 1.41
NFKB1-207ENST00000508584 MBD5Q9P267 1494 aa23.88■■□□□ 1.41
NFKB1-207ENST00000508584 HNRNPMP52272 730 aaKnown RBP eCLIP23.88■■□□□ 1.41
NFKB1-207ENST00000508584 FANCAO15360 1455 aa23.87■■□□□ 1.41
NFKB1-207ENST00000508584 DENND4BO75064 1496 aaPredicted RBP23.87■■□□□ 1.41
NFKB1-207ENST00000508584 NAIPQ13075 1403 aa23.86■■□□□ 1.41
NFKB1-207ENST00000508584 HRCP23327 699 aa23.86■■□□□ 1.41
NFKB1-207ENST00000508584 RSPH4AQ5TD94 716 aa23.86■■□□□ 1.41
NFKB1-207ENST00000508584 SHANK2Q9UPX8 1470 aa23.86■■□□□ 1.41
NFKB1-207ENST00000508584 FRMPD1Q5SYB0 1578 aa23.86■■□□□ 1.41
NFKB1-207ENST00000508584 SYCP2Q9BX26 1530 aa23.85■■□□□ 1.41
NFKB1-207ENST00000508584 CCDC141Q6ZP82 1450 aa23.85■■□□□ 1.41
NFKB1-207ENST00000508584 CROCC2H7BZ55 1655 aa23.85■■□□□ 1.41
NFKB1-207ENST00000508584 ARID4BQ4LE39 1312 aaPredicted RBP23.84■■□□□ 1.41
NFKB1-207ENST00000508584 CFAP74Q9C0B2 1584 aa23.84■■□□□ 1.41
NFKB1-207ENST00000508584 RRP7BPQ9NSQ0 103 aa23.84■■□□□ 1.41
NFKB1-207ENST00000508584 ABCC1P33527 1531 aa23.83■■□□□ 1.41
NFKB1-207ENST00000508584 ADGRL2O95490 1459 aa23.81■■□□□ 1.4
NFKB1-207ENST00000508584 TSPY4P0CV99 314 aa23.81■■□□□ 1.4
NFKB1-207ENST00000508584 TSPY10P0CW01 314 aa23.81■■□□□ 1.4
NFKB1-207ENST00000508584 C9orf84Q5VXU9 1444 aa23.81■■□□□ 1.4
NFKB1-207ENST00000508584 ARHGEF12Q9NZN5 1544 aa23.8■■□□□ 1.4
NFKB1-207ENST00000508584 GCC2Q8IWJ2 1684 aa23.79■■□□□ 1.4
NFKB1-207ENST00000508584 ANKRD30AQ9BXX3 1397 aa23.79■■□□□ 1.4
NFKB1-207ENST00000508584 ADAMTSL3P82987 1691 aa23.79■■□□□ 1.4
NFKB1-207ENST00000508584 ADGBQ8N7X0 1667 aa23.79■■□□□ 1.4
NFKB1-207ENST00000508584 PTPRMP28827 1452 aa23.78■■□□□ 1.4
NFKB1-207ENST00000508584 NCOA1Q15788 1441 aa23.77■■□□□ 1.4
NFKB1-207ENST00000508584 ARHGEF40Q8TER5 1519 aa23.76■■□□□ 1.39
NFKB1-207ENST00000508584 ZEB1P37275 1124 aaPredicted RBP23.76■■□□□ 1.39
NFKB1-207ENST00000508584 DHX57Q6P158 1386 aaKnown RBP23.76■■□□□ 1.39
NFKB1-207ENST00000508584 ILDR1Q86SU0 546 aaPredicted RBP23.75■■□□□ 1.39
NFKB1-207ENST00000508584 RICTORQ6R327 1708 aa23.75■■□□□ 1.39
NFKB1-207ENST00000508584 BCORL1Q5H9F3 1711 aa23.74■■□□□ 1.39
NFKB1-207ENST00000508584 MAST1Q9Y2H9 1570 aa23.74■■□□□ 1.39
NFKB1-207ENST00000508584 TRAPPC8Q9Y2L5 1435 aa23.73■■□□□ 1.39
NFKB1-207ENST00000508584 ZMYM4Q5VZL5 1548 aa23.71■■□□□ 1.39
NFKB1-207ENST00000508584 SCAPERQ9BY12 1400 aa23.71■■□□□ 1.39
NFKB1-207ENST00000508584 MAGI2Q86UL8 1455 aa23.7■■□□□ 1.38
NFKB1-207ENST00000508584 ZFYVE16Q7Z3T8 1539 aa23.69■■□□□ 1.38
NFKB1-207ENST00000508584 POGZQ7Z3K3 1410 aa23.69■■□□□ 1.38
NFKB1-207ENST00000508584 MADDQ8WXG6 1647 aa23.69■■□□□ 1.38
NFKB1-207ENST00000508584 ACIN1Q9UKV3 1341 aaKnown RBP23.68■■□□□ 1.38
NFKB1-207ENST00000508584 KIF15Q9NS87 1388 aa23.67■■□□□ 1.38
NFKB1-207ENST00000508584 YEATS2Q9ULM3 1422 aa23.67■■□□□ 1.38
NFKB1-207ENST00000508584 AFAP1Q8N556 730 aa23.65■■□□□ 1.38
NFKB1-207ENST00000508584 SPAG9O60271 1321 aaKnown RBP23.64■■□□□ 1.38
NFKB1-207ENST00000508584 CLSPNQ9HAW4 1339 aa23.64■■□□□ 1.38
NFKB1-207ENST00000508584 RTEL1-TNFRSF6BF6WH68 1400 aa23.63■■□□□ 1.37
NFKB1-207ENST00000508584 PLXNC1O60486 1568 aa23.63■■□□□ 1.37
NFKB1-207ENST00000508584 ANKRD50Q9ULJ7 1429 aa23.63■■□□□ 1.37
NFKB1-207ENST00000508584 TRIM52Q96A61 297 aa23.6■■□□□ 1.37
NFKB1-207ENST00000508584 ZNF518AQ6AHZ1 1483 aa23.6■■□□□ 1.37
NFKB1-207ENST00000508584 MLECQ14165 292 aa23.59■■□□□ 1.37
NFKB1-207ENST00000508584 RIMS1Q86UR5 1692 aaKnown RBP23.59■■□□□ 1.37
NFKB1-207ENST00000508584 INO80Q9ULG1 1556 aaPredicted RBP23.57■■□□□ 1.36
NFKB1-207ENST00000508584 ATP10AO60312 1499 aa23.56■■□□□ 1.36
NFKB1-207ENST00000508584 ATP7AQ04656 1500 aa23.56■■□□□ 1.36
NFKB1-207ENST00000508584 PLPPR3Q6T4P5 718 aa23.56■■□□□ 1.36
NFKB1-207ENST00000508584 DUOX2Q9NRD8 1548 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms